Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027958

Identifier: 238027958

GI number: 238027958

Start: 2685020

End: 2685805

Strand: Direct

Name: 238027958

Synonym: bglu_1g24040

Alternate gene names: NA

Gene position: 2685020-2685805 (Clockwise)

Preceding gene: 238027957

Following gene: 238027962

Centisome position: 68.73

GC content: 67.81

Gene sequence:

>786_bases
GTGAAGCCACTGGGCCGCGAGACCAGCAACGCCGAGATCAAGCAGCTCCTGGCGCAGGACCACCCCGACCTGAACGAGGG
GACGGTGAACTGCCAGATCTCGATTTGCACGGTGAACCGGGTCGGCCGCGTTGGCTACCCGGAGAACAAGAAGCCCCGCC
TAGCCAACAGCCGGTACGACTTCCTGTTCGCCACCGGGCGCGGCAAGGTCGTCTGGTACGACCCGGACAAGCACGGCCTG
TGGTCGATCGAGGAGACCCCCGAGGGGTTGAAGGTGCGCCGTGTCGACGACTCCACCGAGGAGGTGCCCGCCGCTCCGGA
CATCGACGCCGCCGAGCCGGTGGACGATGGGTTCGGCGGTGGTGCGTTCGCCCTAGAAAGCCACCTGCGCGACTACCTAG
CGCGCAACCCGCCCAGCACCACCGCGCACGGCCCGCTGACCCTGTTCGTCGACGCCGACGGACGCGACGGTGTGGAGTAC
CAGACCGATTGCGGGCCCGCGGACCTGGTGTTCCTGGACCGCGATGGCAACTTCGTGGTGTTCGAGCTGAAACTGGGCCG
GGGCCCGGACGCCGCGCTCGGTCAGGTGCAGCGCTACATGGGGTGGATCGAGCACCACGTGGCCCAGGGCAAGACCGTGT
CCGGGGTGATCGTGGCGAACTCGATCAGCGACAAGCTCAAATACGCCGGCAAGGTCGCCCCGCGCGTTCAGCTCATGGAA
TATCGGCTGAGCGTCGACCTGGCCCCGGTGGCGCTGACCGTGCCCGTTGCGGGAGGTCGCCCATGA

Upstream 100 bases:

>100_bases
GGCCCCGACGCCTGGCGATACGACCAACGCGAGGACCCGAGCCGTGAGCACCGCCCCCACCACCCCACGCCCGCCGATCT
GGCAACTCATCCGTGACGCC

Downstream 100 bases:

>100_bases
TCGCGTGGTTGTCGCACGCCTGGACCGCGGCGGTGTCGTTCGTCGGGGACCTCAACGAAGGCGAGCTGCGGTTGCTGGCC
GGCGCGGTGTCGGTGGTGAC

Product: RecB family-like nuclease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYDFLFATGRGKVVWYDPDKHGL
WSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGGGAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEY
QTDCGPADLVFLDRDGNFVVFELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME
YRLSVDLAPVALTVPVAGGRP

Sequences:

>Translated_261_residues
MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYDFLFATGRGKVVWYDPDKHGL
WSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGGGAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEY
QTDCGPADLVFLDRDGNFVVFELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME
YRLSVDLAPVALTVPVAGGRP
>Mature_261_residues
MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYDFLFATGRGKVVWYDPDKHGL
WSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGGGAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEY
QTDCGPADLVFLDRDGNFVVFELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME
YRLSVDLAPVALTVPVAGGRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28422; Mature: 28422

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYD
CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEE
FLFATGRGKVVWYDPDKHGLWSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGG
EEEECCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCC
GAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEYQTDCGPADLVFLDRDGNFVV
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEECCCCEEE
FELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME
EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCHHEEEE
YRLSVDLAPVALTVPVAGGRP
EEEECEEEEEEEEEECCCCCC
>Mature Secondary Structure
MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYD
CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEE
FLFATGRGKVVWYDPDKHGLWSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGG
EEEECCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCC
GAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEYQTDCGPADLVFLDRDGNFVV
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEECCCCEEE
FELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME
EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCHHEEEE
YRLSVDLAPVALTVPVAGGRP
EEEECEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA