| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027949
Identifier: 238027949
GI number: 238027949
Start: 2651541
End: 2652302
Strand: Direct
Name: 238027949
Synonym: bglu_1g23950
Alternate gene names: NA
Gene position: 2651541-2652302 (Clockwise)
Preceding gene: 238027946
Following gene: 238027957
Centisome position: 67.87
GC content: 67.59
Gene sequence:
>762_bases ATGAGCGACGACGAACGCCAGATTCGCGCCGGGGACCACCTGTGGGTGCAGCGCCTGGGCTACGAGCACCACGGCCTTGC CTCGGGGCGGGACACCGTCATCCAGTATTCAGGGAAGGACGGGATCTTCGAAACTGGGGCGATCGAGGAGGTGCCGCTCT CGACCTTTGCGAAAGACCGCAAGGTCCGGTTCGTCGAACATCCGGACCGCCTGCACGGTCGTCTGGAAAGCGTCCGGCGG GCCCGGCAGCGGATCGGAGAGGAAAAGTACAACCTCGTCTTCAACAACTGCGAGCACTTCGTGATGTGGTGCATCGAGGA CAAGCACACCAGCGAGCAAGTCAACAACAAGGTCCGGCATGCCGGTCGCGCCGCCACCGCCGCCGTGATGTACCGCTGGT ACCAGACCTGGGCGATGGAAGAGGCCATGGGCCCGACGGTCCGGGTGGCTGCCCAGATGATGAGCGCCGGGCGCACGGCG TCGACGGTGACCAGCGCGATGAACGCCGCGTCCGCCGCCCGTACCGCCGCCTCGCTGGCCCCTACTGTGAGCGCCGCCCT TACCTCGTCTGCGCCGGCCGCAACAACCGCGATCGCCAACGGTTTGACCGCTGCGGGCCTGACCGGTGTCGTTGGTGGTG CCGGCGCTGCCGCCGTCGGGATCGTCTCGGCGCCGGTGACTCTGCCCGTCGTCGCCGTGGCCGCGGGTGTCGGGCTGGCC GTCACCGCCGTGAGCGCCATCTGGGACAGCATTTTCGATTGA
Upstream 100 bases:
>100_bases CCCACCGCACCGCGCGCCGTCGTGCTGCTGTAAAGTTCAGCGGTGCGCTGCCGTAGAGCAGGGACCGACAACACGAACAC GAAAAAGCGAGAGGACCAGC
Downstream 100 bases:
>100_bases CCGAACAAGCGGGGCCCGTGCCAGGGCACCCGCTTACCCTGCCGCCTCACCACCCCGCCTCAATGGCACTTGCCCTTGCG TTTCCGTATCGGCCCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSDDERQIRAGDHLWVQRLGYEHHGLASGRDTVIQYSGKDGIFETGAIEEVPLSTFAKDRKVRFVEHPDRLHGRLESVRR ARQRIGEEKYNLVFNNCEHFVMWCIEDKHTSEQVNNKVRHAGRAATAAVMYRWYQTWAMEEAMGPTVRVAAQMMSAGRTA STVTSAMNAASAARTAASLAPTVSAALTSSAPAATTAIANGLTAAGLTGVVGGAGAAAVGIVSAPVTLPVVAVAAGVGLA VTAVSAIWDSIFD
Sequences:
>Translated_253_residues MSDDERQIRAGDHLWVQRLGYEHHGLASGRDTVIQYSGKDGIFETGAIEEVPLSTFAKDRKVRFVEHPDRLHGRLESVRR ARQRIGEEKYNLVFNNCEHFVMWCIEDKHTSEQVNNKVRHAGRAATAAVMYRWYQTWAMEEAMGPTVRVAAQMMSAGRTA STVTSAMNAASAARTAASLAPTVSAALTSSAPAATTAIANGLTAAGLTGVVGGAGAAAVGIVSAPVTLPVVAVAAGVGLA VTAVSAIWDSIFD >Mature_252_residues SDDERQIRAGDHLWVQRLGYEHHGLASGRDTVIQYSGKDGIFETGAIEEVPLSTFAKDRKVRFVEHPDRLHGRLESVRRA RQRIGEEKYNLVFNNCEHFVMWCIEDKHTSEQVNNKVRHAGRAATAAVMYRWYQTWAMEEAMGPTVRVAAQMMSAGRTAS TVTSAMNAASAARTAASLAPTVSAALTSSAPAATTAIANGLTAAGLTGVVGGAGAAAVGIVSAPVTLPVVAVAAGVGLAV TAVSAIWDSIFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26823; Mature: 26691
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDERQIRAGDHLWVQRLGYEHHGLASGRDTVIQYSGKDGIFETGAIEEVPLSTFAKDR CCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCC KVRFVEHPDRLHGRLESVRRARQRIGEEKYNLVFNNCEHFVMWCIEDKHTSEQVNNKVRH CEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH AGRAATAAVMYRWYQTWAMEEAMGPTVRVAAQMMSAGRTASTVTSAMNAASAARTAASLA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH PTVSAALTSSAPAATTAIANGLTAAGLTGVVGGAGAAAVGIVSAPVTLPVVAVAAGVGLA HHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH VTAVSAIWDSIFD HHHHHHHHHHHCC >Mature Secondary Structure SDDERQIRAGDHLWVQRLGYEHHGLASGRDTVIQYSGKDGIFETGAIEEVPLSTFAKDR CCCHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCC KVRFVEHPDRLHGRLESVRRARQRIGEEKYNLVFNNCEHFVMWCIEDKHTSEQVNNKVRH CEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH AGRAATAAVMYRWYQTWAMEEAMGPTVRVAAQMMSAGRTASTVTSAMNAASAARTAASLA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH PTVSAALTSSAPAATTAIANGLTAAGLTGVVGGAGAAAVGIVSAPVTLPVVAVAAGVGLA HHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH VTAVSAIWDSIFD HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA