| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027932
Identifier: 238027932
GI number: 238027932
Start: 2609928
End: 2610755
Strand: Reverse
Name: 238027932
Synonym: bglu_1g23770
Alternate gene names: NA
Gene position: 2610755-2609928 (Counterclockwise)
Preceding gene: 238027943
Following gene: 238027930
Centisome position: 66.83
GC content: 69.2
Gene sequence:
>828_bases GTGCTGAAACGCACATTACTTTCGCTTTGGCTGCTGCTGCTGGGCACGCTCGCCCACGGCACGCCAGCCCAACCCGCGAT CACGATCGCGTCCCACGGCAAGCTGCTGACGTTCACCGCCCAGACCCTGCTGGCGCGCGCCGACGCGGCCGACATCCACG TCACCCGCGACGTTTCCTACGGCAAGCCGATGACGTACCGCGCGGTGCCGCTGGCCGACCTGATCGACGGCGCGTCGCTG CCGCCCGACGGCGTGATCGAGACGCGCGCCACCGACGGCTTCGCCGCACAGCTGCCGATGGATCTGGTTCGGAATCGCGA TCCCGCACGCGCCGTGGCCTATCTCGCAGTGGAGGACCCGGCGCGGCCGTGGCCAAAATTGCCGGGCAAACCGGTGAGTG CCGGGCCGTTCTATCTGGTCTGGGTAGGCGCGCAGGCGGCGTCGGTGCGCGGCGAGCAATGGCCCTACCAGGTGGCGCGC TTCACCATCGAGCGTGCGCCGGTCGCGCGCTGGCCCGCGCTCGCCGTCGATTCGGCGCTGCCGGCAACCGATCCGGTCCG CGCCGGGCAGCGCCTGTTCATCACGCAGTGCCTGGCCTGCCACCGCTTCAACGGCGCGGGCAGTTCGAACACCGGCCCCG ATCTCGGCAAGCCCGCCAATCCGGTCGATTACTTCCAGCCGGGCGCGCTGCATCGCTACATCCGCAATCCCGCCTCGCTG CGGGACTGGCCCGGCCGTGCCATGCCGGCCTTTTCGCCGGACCAGTTGAGCGATCGCGAGATCGATCTGATCATTGGCTA TCTCGCCTACATGGCGCATCGGCGATAA
Upstream 100 bases:
>100_bases GACACGCTGAGATAATCGGCCTGCCGTGCGCCCGACAAGAGCCGCGGCCTGCAACCCGGCGCCATCGCAAGCCGCGAGCG CCCACCCACGGAGCCCCCGA
Downstream 100 bases:
>100_bases TCGCGAGCGCATGATGCGCACGGCGCGCCGCGTCGGGCGCGTTGCCGGCCTGGCAAACGCGAAGCCGCGCGGCGCGAGCA TCGGCTTCGACGGCCGCACG
Product: cytochrome c, class I
Products: NA
Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C-Like Protein; Cytochrome; Signal Peptide Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLKRTLLSLWLLLLGTLAHGTPAQPAITIASHGKLLTFTAQTLLARADAADIHVTRDVSYGKPMTYRAVPLADLIDGASL PPDGVIETRATDGFAAQLPMDLVRNRDPARAVAYLAVEDPARPWPKLPGKPVSAGPFYLVWVGAQAASVRGEQWPYQVAR FTIERAPVARWPALAVDSALPATDPVRAGQRLFITQCLACHRFNGAGSSNTGPDLGKPANPVDYFQPGALHRYIRNPASL RDWPGRAMPAFSPDQLSDREIDLIIGYLAYMAHRR
Sequences:
>Translated_275_residues MLKRTLLSLWLLLLGTLAHGTPAQPAITIASHGKLLTFTAQTLLARADAADIHVTRDVSYGKPMTYRAVPLADLIDGASL PPDGVIETRATDGFAAQLPMDLVRNRDPARAVAYLAVEDPARPWPKLPGKPVSAGPFYLVWVGAQAASVRGEQWPYQVAR FTIERAPVARWPALAVDSALPATDPVRAGQRLFITQCLACHRFNGAGSSNTGPDLGKPANPVDYFQPGALHRYIRNPASL RDWPGRAMPAFSPDQLSDREIDLIIGYLAYMAHRR >Mature_275_residues MLKRTLLSLWLLLLGTLAHGTPAQPAITIASHGKLLTFTAQTLLARADAADIHVTRDVSYGKPMTYRAVPLADLIDGASL PPDGVIETRATDGFAAQLPMDLVRNRDPARAVAYLAVEDPARPWPKLPGKPVSAGPFYLVWVGAQAASVRGEQWPYQVAR FTIERAPVARWPALAVDSALPATDPVRAGQRLFITQCLACHRFNGAGSSNTGPDLGKPANPVDYFQPGALHRYIRNPASL RDWPGRAMPAFSPDQLSDREIDLIIGYLAYMAHRR
Specific function: Unknown
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29918; Mature: 29918
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRTLLSLWLLLLGTLAHGTPAQPAITIASHGKLLTFTAQTLLARADAADIHVTRDVSY CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEHHHHHHHHCCCCCEEEEECCCC GKPMTYRAVPLADLIDGASLPPDGVIETRATDGFAAQLPMDLVRNRDPARAVAYLAVEDP CCCCEEECCCHHHHHCCCCCCCCCCEEECCCCCCHHHCCHHHHCCCCHHHEEEEEEECCC ARPWPKLPGKPVSAGPFYLVWVGAQAASVRGEQWPYQVARFTIERAPVARWPALAVDSAL CCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCC PATDPVRAGQRLFITQCLACHRFNGAGSSNTGPDLGKPANPVDYFQPGALHRYIRNPASL CCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC RDWPGRAMPAFSPDQLSDREIDLIIGYLAYMAHRR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKRTLLSLWLLLLGTLAHGTPAQPAITIASHGKLLTFTAQTLLARADAADIHVTRDVSY CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEHHHHHHHHCCCCCEEEEECCCC GKPMTYRAVPLADLIDGASLPPDGVIETRATDGFAAQLPMDLVRNRDPARAVAYLAVEDP CCCCEEECCCHHHHHCCCCCCCCCCEEECCCCCCHHHCCHHHHCCCCHHHEEEEEEECCC ARPWPKLPGKPVSAGPFYLVWVGAQAASVRGEQWPYQVARFTIERAPVARWPALAVDSAL CCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCC PATDPVRAGQRLFITQCLACHRFNGAGSSNTGPDLGKPANPVDYFQPGALHRYIRNPASL CCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC RDWPGRAMPAFSPDQLSDREIDLIIGYLAYMAHRR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA