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The map label for this gene is kdgT [H]

Identifier: 238027930

GI number: 238027930

Start: 2607119

End: 2608144

Strand: Reverse

Name: kdgT [H]

Synonym: bglu_1g23750

Alternate gene names: 238027930

Gene position: 2608144-2607119 (Counterclockwise)

Preceding gene: 238027932

Following gene: 238027929

Centisome position: 66.76

GC content: 69.2

Gene sequence:

>1026_bases
GTGAATATCAAGAGAGTGATCGACCGCGTGCCGGGCGGGCTGATGCTGGTGCCGATGGTGCTGGGGGCCTGCGTGCATAC
CTTCGCGCCTGATGCGGGCAAGTATTTCGGCTCGTTTACGAACGGGCTGATCTCGGGCACGGTGCCGATCCTCGCGGTCT
GGTTCTTCTGCATGGGCGCGACCATCGACCTGCGCGCCACCGGCGTGGTGCTGCGCAAGTCGGGCACGCTGGTGATCACC
AAGACGCTGGTGGCCTGGCTCGTGACGCTGCTCTGCGCCCAGTTCATCCCAGCGGACGGGATCAAGAGCGGGGTGCTGGC
CGGGCTGTCGCTGCTGGCGATCGTGGCGGCGATGGACATGACCAACGGCGGGCTCTACGCGGCCGTGATGCAGCAGTACG
GCACGCGCGAGGAAGCCGGCGCGTTCGTGCTGATGTCGCTCGAATCGGGGCCGCTCGTCAGCATGACGATCCTAGGCGCC
ACCGGGGTGGCGGTGTTCGAGCCGAGGCTGTTCGTGGGCGCCGTGCTGCCGTTCCTGATCGGCTTCGCGCTCGGCAACCT
GGACCGTGACCTGCGCGACCTGTTCGGCCGTTGCGTGCATCCGCTGATTCCGTTCTTCGGCTTTGCGCTCGGCAACGGCA
TCGACCTGCGCGTGATCGCCCACAGCGGGATTCCCGGCCTGCTGCTCGGCCTCGCGGTGATCGTCGTGACCGGCGTGCCG
CTGATCCTCGCCGACCGCCTGATCGGCGGCGGCAACGGCACGGCGGGCCTTGCCGCCTCGTCCACGGCGGGTGCCGCGGT
CGCGAACCCGGCCATCATCGGCGAGATGGTGCCGAAGCTCAAGCCGCTCGTGCCGGCCGCGACGGCGACCGTCGCCACGG
CCTGCCTGATCACGGCAATCCTCGTGCCGATCCTCACGGCGATGTGGTCACGCCGCTTCGCGAAGACGGGCGCCCCGGCT
GCCGGCAACGCGAACCCGGCGGCGCTGCCGGAGGTGAGGGCTCGCGGACATCGGGAGCCTATCTGA

Upstream 100 bases:

>100_bases
CCGCCATGTAAGGCGCTATGTGAATGGAATAACGTTCCGAAACTGCCAGGCAGACGACGGCAACGATAATGGGCGAGCAC
GTCCACGCATGGAGTAGCGA

Downstream 100 bases:

>100_bases
GCGGTGGATGCGACGCGCGCCGCGTGCGCCGCTTTGTCTTTGGGGGTGGCGGGGGGGCTGAGGGGAGCGCCCACGCGGTG
TGGTGTGACGGCCTTGATGC

Product: 2-keto-3-deoxygluconate permease

Products: Proton [Cytoplasm]; 2-dehydro-3-deoxy-D-gluconate [Cytoplasm] [C]

Alternate protein names: KDG permease [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNIKRVIDRVPGGLMLVPMVLGACVHTFAPDAGKYFGSFTNGLISGTVPILAVWFFCMGATIDLRATGVVLRKSGTLVIT
KTLVAWLVTLLCAQFIPADGIKSGVLAGLSLLAIVAAMDMTNGGLYAAVMQQYGTREEAGAFVLMSLESGPLVSMTILGA
TGVAVFEPRLFVGAVLPFLIGFALGNLDRDLRDLFGRCVHPLIPFFGFALGNGIDLRVIAHSGIPGLLLGLAVIVVTGVP
LILADRLIGGGNGTAGLAASSTAGAAVANPAIIGEMVPKLKPLVPAATATVATACLITAILVPILTAMWSRRFAKTGAPA
AGNANPAALPEVRARGHREPI

Sequences:

>Translated_341_residues
MNIKRVIDRVPGGLMLVPMVLGACVHTFAPDAGKYFGSFTNGLISGTVPILAVWFFCMGATIDLRATGVVLRKSGTLVIT
KTLVAWLVTLLCAQFIPADGIKSGVLAGLSLLAIVAAMDMTNGGLYAAVMQQYGTREEAGAFVLMSLESGPLVSMTILGA
TGVAVFEPRLFVGAVLPFLIGFALGNLDRDLRDLFGRCVHPLIPFFGFALGNGIDLRVIAHSGIPGLLLGLAVIVVTGVP
LILADRLIGGGNGTAGLAASSTAGAAVANPAIIGEMVPKLKPLVPAATATVATACLITAILVPILTAMWSRRFAKTGAPA
AGNANPAALPEVRARGHREPI
>Mature_341_residues
MNIKRVIDRVPGGLMLVPMVLGACVHTFAPDAGKYFGSFTNGLISGTVPILAVWFFCMGATIDLRATGVVLRKSGTLVIT
KTLVAWLVTLLCAQFIPADGIKSGVLAGLSLLAIVAAMDMTNGGLYAAVMQQYGTREEAGAFVLMSLESGPLVSMTILGA
TGVAVFEPRLFVGAVLPFLIGFALGNLDRDLRDLFGRCVHPLIPFFGFALGNGIDLRVIAHSGIPGLLLGLAVIVVTGVP
LILADRLIGGGNGTAGLAASSTAGAAVANPAIIGEMVPKLKPLVPAATATVATACLITAILVPILTAMWSRRFAKTGAPA
AGNANPAALPEVRARGHREPI

Specific function: The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdgT transporter family [H]

Homologues:

Organism=Escherichia coli, GI87082349, Length=312, Percent_Identity=70.1923076923077, Blast_Score=419, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004684
- InterPro:   IPR018395
- ProDom:   PD024513 [H]

Pfam domain/function: PF03812 KdgT [H]

EC number: NA

Molecular weight: Translated: 35058; Mature: 35058

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKRVIDRVPGGLMLVPMVLGACVHTFAPDAGKYFGSFTNGLISGTVPILAVWFFCMGA
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TIDLRATGVVLRKSGTLVITKTLVAWLVTLLCAQFIPADGIKSGVLAGLSLLAIVAAMDM
CEEEEECEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
TNGGLYAAVMQQYGTREEAGAFVLMSLESGPLVSMTILGATGVAVFEPRLFVGAVLPFLI
CCCCHHHHHHHHHCCHHHCCEEEEEEECCCCEEEEEEECCCCHHHHCHHHHHHHHHHHHH
GFALGNLDRDLRDLFGRCVHPLIPFFGFALGNGIDLRVIAHSGIPGLLLGLAVIVVTGVP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCH
LILADRLIGGGNGTAGLAASSTAGAAVANPAIIGEMVPKLKPLVPAATATVATACLITAI
HHHHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LVPILTAMWSRRFAKTGAPAAGNANPAALPEVRARGHREPI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MNIKRVIDRVPGGLMLVPMVLGACVHTFAPDAGKYFGSFTNGLISGTVPILAVWFFCMGA
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TIDLRATGVVLRKSGTLVITKTLVAWLVTLLCAQFIPADGIKSGVLAGLSLLAIVAAMDM
CEEEEECEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
TNGGLYAAVMQQYGTREEAGAFVLMSLESGPLVSMTILGATGVAVFEPRLFVGAVLPFLI
CCCCHHHHHHHHHCCHHHCCEEEEEEECCCCEEEEEEECCCCHHHHCHHHHHHHHHHHHH
GFALGNLDRDLRDLFGRCVHPLIPFFGFALGNGIDLRVIAHSGIPGLLLGLAVIVVTGVP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCH
LILADRLIGGGNGTAGLAASSTAGAAVANPAIIGEMVPKLKPLVPAATATVATACLITAI
HHHHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LVPILTAMWSRRFAKTGAPAAGNANPAALPEVRARGHREPI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; 2-dehydro-3-deoxy-D-gluconate [Periplasm] [C]

Specific reaction: Proton [Periplasm] + 2-dehydro-3-deoxy-D-gluconate [Periplasm] = Proton [Cytoplasm] + 2-dehydro-3-deoxy-D-gluconate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA