| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is luxQ [H]
Identifier: 238027849
GI number: 238027849
Start: 2487878
End: 2489824
Strand: Direct
Name: luxQ [H]
Synonym: bglu_1g22800
Alternate gene names: 238027849
Gene position: 2487878-2489824 (Clockwise)
Preceding gene: 238027848
Following gene: 238027850
Centisome position: 63.69
GC content: 73.86
Gene sequence:
>1947_bases ATGGCCGCGTTAAGCCCGCTGATCCTCAACGTCGACGACAACGAGGGCGCCCGCTATGCCAAGACGCGCGTGCTGATCCA CGCCGGCTACCAGGTGATCGAGGCCGGCACCGGACAGGACGCGCTCGACCTGGTCGAGGCGCGCCGCCCGGCGCTGGTGC TGCTCGACGTGCGGCTGCCCGACATCAGCGGCATCGACGTCTGCTCGCAGATCAAGCGCGACGCGCGCACGCGCTCGACG CTGGTGCTGCAGACCTCCGCCGCGGCGGTGCAGTCGCTCGACAAGGTGCGCGCGCTCGACGGCGGCGCCGACAGCTATCT GACCGAACCGATCGCGCCGGCCGAACTGGTCGCGAACGTGCGCGCGCTGCTGCGCCTGCACCGGGCCGAGGAGGCGCTGC GCGACGCCGACCGCCGCAAGGACCAGTTCCTCGCCACACTCGCGCATGAGCTGCGCAATCCGCTCGCCCCGATCCGCAAC GCGATCGAGCTGATGGACCCCAAATACCAAGCGGCCGAGGCGCTGGTGCACGACGCGCGCATGATCGCGCGCCGCCAGGT GGACCATCTGAGCCGGCTGGTGGACGACCTGCTCGACGTGTCGCGCATCACTCACGGCAAGATCGCGCTGCGCATGGAGC CGGTGGACATCGAGGCGGCGGTGGCCGCCGCGGTGGAAACCAGCCAGCCGGCCATGGAGCGCAAGCACCACGTGCTGCGC GTGAGCATGCCGCCGCTGCCCTGCGTGGTGAACGGCGACGCGATCCGGATCTCGCAGGTGATCGCCAACCTGCTGTCGAA CGCGGCCAAGTACACGCCCGACGGCGGACGCATCGAGCTCGGCGTGGCGGTCGCGCCCGGCGCCGTCGAGATCAGCGTGG CCGACAACGGCATCGGCATCGCGCCGGCCGAACTCGACGAGGTGTTCAACCTGTTCATGCAGTCGGCCGACTCGGTCAAG CGCTCCGAGGGCGGGCTCGGCATCGGTCTGTCGCTCGCGCGCACGCTCACCGAGCTGCACGGCGGCACCATCGTCGCGAG TTCGGACGGCATCGGCCACGGCTCGCGGTTCGTGGTGCGGCTGCCGCTCGCCGTGCCCGACCCGGCCGCCGCCGGCCCGG CCGCCGCCGACGCCGCGCCGCGCCCGCAGCGCCGCGTGATGGTGGTGGACGACAGCGTGGACGGCGCCGAATCGATGTCG GTGCTGCTGCGCATCCTCGGCCACGAGGTGCGCACGCTCTACGAGGGCACCTCGGCGATCGCGGCCGCGGCCGCGTTCCA GCCCGAGGTGGTGATGCTCGACATCGGCCTGCCCGGCATGGACGGCTACGAGATCGCGCGCGCCCTGCGCGCCCTGCCCG CCACCGCCGGCGCGCTGCTGATCGCGCTGACCGGCTACGGCCAGGAAAGCGACCGCCAGCGCACGCGCGCGGCCGGCTTC GATCACCATCTCGTGAAGCCGGCCACGCTCGAGGACATCGAGCGCGCGATCGCCACTGTCGGCACCGACGCGGCGGCGCG CCGGCACCGCGCCGGCCAACCGGGCCGCCTCGCCCGGCAGCGAGCGGCCCCGGCCCGCGGGCCGGAGCGGGCCGCCGAAG CGAGTCACCTGAGCGGGCGGACGCCGGCCTCGGACGGGCCGCCCGCTCGGCCCGAGCCGACGAGCCGATCCGCAGCGCCG GCCTCGCCCGCCCCCACACTGGCGCGCGGCCCCGGCGCAGCGCCGGCCAACCGCCCGGCTCGTCGCCGCGACGGTCGCGC GACGCCTCGACATGCTTTCCACTGCCTTGCGGCGCCGCGCCCGCAGGCCGCTGCCGGCGCGGCGGCGCCGGGTTCGGGTA CGAGCGTTGCTGCCTGCTCGGTGAGCCTCGGGATCGCGATCCCGGCCTGCGTCCACCAACAGGAGCGTCGCCATGTCCGG CAGCATGGATCAAACCACGATGCGTGA
Upstream 100 bases:
>100_bases CGCTGCCGCTGCGCTTCGCGGCCCCGGCCCAGGCGCACCACGACGGCGCCGCCGCTGCCGGCGGCCTCACCGACACCCCG ACTTCGCGTGGAGATGACGC
Downstream 100 bases:
>100_bases CCCGCTCACGCACTACCCGCGTTCCGCCTTCGACAAGCAGCCCCGGCCCGCTCCGGGCCTCGCCGGCCAGATGCGCCCGC GCCCCGACCACGGCGAAACC
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MAALSPLILNVDDNEGARYAKTRVLIHAGYQVIEAGTGQDALDLVEARRPALVLLDVRLPDISGIDVCSQIKRDARTRST LVLQTSAAAVQSLDKVRALDGGADSYLTEPIAPAELVANVRALLRLHRAEEALRDADRRKDQFLATLAHELRNPLAPIRN AIELMDPKYQAAEALVHDARMIARRQVDHLSRLVDDLLDVSRITHGKIALRMEPVDIEAAVAAAVETSQPAMERKHHVLR VSMPPLPCVVNGDAIRISQVIANLLSNAAKYTPDGGRIELGVAVAPGAVEISVADNGIGIAPAELDEVFNLFMQSADSVK RSEGGLGIGLSLARTLTELHGGTIVASSDGIGHGSRFVVRLPLAVPDPAAAGPAAADAAPRPQRRVMVVDDSVDGAESMS VLLRILGHEVRTLYEGTSAIAAAAAFQPEVVMLDIGLPGMDGYEIARALRALPATAGALLIALTGYGQESDRQRTRAAGF DHHLVKPATLEDIERAIATVGTDAAARRHRAGQPGRLARQRAAPARGPERAAEASHLSGRTPASDGPPARPEPTSRSAAP ASPAPTLARGPGAAPANRPARRRDGRATPRHAFHCLAAPRPQAAAGAAAPGSGTSVAACSVSLGIAIPACVHQQERRHVR QHGSNHDA
Sequences:
>Translated_648_residues MAALSPLILNVDDNEGARYAKTRVLIHAGYQVIEAGTGQDALDLVEARRPALVLLDVRLPDISGIDVCSQIKRDARTRST LVLQTSAAAVQSLDKVRALDGGADSYLTEPIAPAELVANVRALLRLHRAEEALRDADRRKDQFLATLAHELRNPLAPIRN AIELMDPKYQAAEALVHDARMIARRQVDHLSRLVDDLLDVSRITHGKIALRMEPVDIEAAVAAAVETSQPAMERKHHVLR VSMPPLPCVVNGDAIRISQVIANLLSNAAKYTPDGGRIELGVAVAPGAVEISVADNGIGIAPAELDEVFNLFMQSADSVK RSEGGLGIGLSLARTLTELHGGTIVASSDGIGHGSRFVVRLPLAVPDPAAAGPAAADAAPRPQRRVMVVDDSVDGAESMS VLLRILGHEVRTLYEGTSAIAAAAAFQPEVVMLDIGLPGMDGYEIARALRALPATAGALLIALTGYGQESDRQRTRAAGF DHHLVKPATLEDIERAIATVGTDAAARRHRAGQPGRLARQRAAPARGPERAAEASHLSGRTPASDGPPARPEPTSRSAAP ASPAPTLARGPGAAPANRPARRRDGRATPRHAFHCLAAPRPQAAAGAAAPGSGTSVAACSVSLGIAIPACVHQQERRHVR QHGSNHDA >Mature_647_residues AALSPLILNVDDNEGARYAKTRVLIHAGYQVIEAGTGQDALDLVEARRPALVLLDVRLPDISGIDVCSQIKRDARTRSTL VLQTSAAAVQSLDKVRALDGGADSYLTEPIAPAELVANVRALLRLHRAEEALRDADRRKDQFLATLAHELRNPLAPIRNA IELMDPKYQAAEALVHDARMIARRQVDHLSRLVDDLLDVSRITHGKIALRMEPVDIEAAVAAAVETSQPAMERKHHVLRV SMPPLPCVVNGDAIRISQVIANLLSNAAKYTPDGGRIELGVAVAPGAVEISVADNGIGIAPAELDEVFNLFMQSADSVKR SEGGLGIGLSLARTLTELHGGTIVASSDGIGHGSRFVVRLPLAVPDPAAAGPAAADAAPRPQRRVMVVDDSVDGAESMSV LLRILGHEVRTLYEGTSAIAAAAAFQPEVVMLDIGLPGMDGYEIARALRALPATAGALLIALTGYGQESDRQRTRAAGFD HHLVKPATLEDIERAIATVGTDAAARRHRAGQPGRLARQRAAPARGPERAAEASHLSGRTPASDGPPARPEPTSRSAAPA SPAPTLARGPGAAPANRPARRRDGRATPRHAFHCLAAPRPQAAAGAAAPGSGTSVAACSVSLGIAIPACVHQQERRHVRQ HGSNHDA
Specific function: At low cell density, in absence of AI-2 (autoinducer 2), luxQ has a kinase activity and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=378, Percent_Identity=31.4814814814815, Blast_Score=131, Evalue=1e-31, Organism=Escherichia coli, GI1788713, Length=364, Percent_Identity=27.7472527472527, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI145693157, Length=266, Percent_Identity=33.0827067669173, Blast_Score=113, Evalue=4e-26, Organism=Escherichia coli, GI1786912, Length=254, Percent_Identity=32.2834645669291, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1788393, Length=230, Percent_Identity=29.5652173913043, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1790436, Length=270, Percent_Identity=31.1111111111111, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI87081816, Length=363, Percent_Identity=29.7520661157025, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789149, Length=281, Percent_Identity=29.1814946619217, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1786600, Length=310, Percent_Identity=26.1290322580645, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI1786783, Length=255, Percent_Identity=26.2745098039216, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790346, Length=251, Percent_Identity=26.2948207171315, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=38.135593220339, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1790551, Length=221, Percent_Identity=28.5067873303167, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1787894, Length=230, Percent_Identity=27.3913043478261, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1788549, Length=225, Percent_Identity=25.7777777777778, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788279, Length=310, Percent_Identity=24.5161290322581, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87082128, Length=259, Percent_Identity=27.4131274131274, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1790300, Length=234, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI87082012, Length=122, Percent_Identity=37.7049180327869, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786911, Length=125, Percent_Identity=37.6, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790861, Length=234, Percent_Identity=28.6324786324786, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1789808, Length=231, Percent_Identity=25.974025974026, Blast_Score=63, Evalue=5e-11, Organism=Escherichia coli, GI1786784, Length=118, Percent_Identity=34.7457627118644, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 68151; Mature: 68020
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALSPLILNVDDNEGARYAKTRVLIHAGYQVIEAGTGQDALDLVEARRPALVLLDVRLP CCCCCCEEEEECCCCCCCHHHHEEEEECCCEEEECCCCCHHHHHHHCCCCEEEEEEEECC DISGIDVCSQIKRDARTRSTLVLQTSAAAVQSLDKVRALDGGADSYLTEPIAPAELVANV CCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHH RALLRLHRAEEALRDADRRKDQFLATLAHELRNPLAPIRNAIELMDPKYQAAEALVHDAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH MIARRQVDHLSRLVDDLLDVSRITHGKIALRMEPVDIEAAVAAAVETSQPAMERKHHVLR HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHCCCEEE VSMPPLPCVVNGDAIRISQVIANLLSNAAKYTPDGGRIELGVAVAPGAVEISVADNGIGI EECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCC APAELDEVFNLFMQSADSVKRSEGGLGIGLSLARTLTELHGGTIVASSDGIGHGSRFVVR CHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEE LPLAVPDPAAAGPAAADAAPRPQRRVMVVDDSVDGAESMSVLLRILGHEVRTLYEGTSAI ECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHH AAAAAFQPEVVMLDIGLPGMDGYEIARALRALPATAGALLIALTGYGQESDRQRTRAAGF HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHCEEEEEEECCCCCHHHHHHHHCCC DHHLVKPATLEDIERAIATVGTDAAARRHRAGQPGRLARQRAAPARGPERAAEASHLSGR CCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCC TPASDGPPARPEPTSRSAAPASPAPTLARGPGAAPANRPARRRDGRATPRHAFHCLAAPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHCCCC PQAAAGAAAPGSGTSVAACSVSLGIAIPACVHQQERRHVRQHGSNHDA CCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AALSPLILNVDDNEGARYAKTRVLIHAGYQVIEAGTGQDALDLVEARRPALVLLDVRLP CCCCCEEEEECCCCCCCHHHHEEEEECCCEEEECCCCCHHHHHHHCCCCEEEEEEEECC DISGIDVCSQIKRDARTRSTLVLQTSAAAVQSLDKVRALDGGADSYLTEPIAPAELVANV CCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHH RALLRLHRAEEALRDADRRKDQFLATLAHELRNPLAPIRNAIELMDPKYQAAEALVHDAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH MIARRQVDHLSRLVDDLLDVSRITHGKIALRMEPVDIEAAVAAAVETSQPAMERKHHVLR HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHCCCEEE VSMPPLPCVVNGDAIRISQVIANLLSNAAKYTPDGGRIELGVAVAPGAVEISVADNGIGI EECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCC APAELDEVFNLFMQSADSVKRSEGGLGIGLSLARTLTELHGGTIVASSDGIGHGSRFVVR CHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEE LPLAVPDPAAAGPAAADAAPRPQRRVMVVDDSVDGAESMSVLLRILGHEVRTLYEGTSAI ECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHH AAAAAFQPEVVMLDIGLPGMDGYEIARALRALPATAGALLIALTGYGQESDRQRTRAAGF HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHCEEEEEEECCCCCHHHHHHHHCCC DHHLVKPATLEDIERAIATVGTDAAARRHRAGQPGRLARQRAAPARGPERAAEASHLSGR CCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCC TPASDGPPARPEPTSRSAAPASPAPTLARGPGAAPANRPARRRDGRATPRHAFHCLAAPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHCCCC PQAAAGAAAPGSGTSVAACSVSLGIAIPACVHQQERRHVRQHGSNHDA CCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301; 12176318 [H]