| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is katE [C]
Identifier: 238027834
GI number: 238027834
Start: 2469554
End: 2471092
Strand: Reverse
Name: katE [C]
Synonym: bglu_1g22650
Alternate gene names: 238027834
Gene position: 2471092-2469554 (Counterclockwise)
Preceding gene: 238027835
Following gene: 238027833
Centisome position: 63.26
GC content: 64.46
Gene sequence:
>1539_bases ATGAAGACGCAAAGCAACCTGTCGCGCTGGGCCATTCCGGCCGCGATCAGCCTGATGATGTCGTCGATGGCATGCGCGGC CGGCAACCTGACCCGCGACAACGGTTCGCCGGTGGGCGACAACCAGAACTCGCAGACGGCCGGCCCGAGCGGTCCGACGC TATTGCAGGATTCGCACCTGGTGGAGAAGCTGCAGCGCTTCGACCGCGAGCGGATTCCGGAGCGCGTGGTGCACGCGCGC GGCACCGGCGCCTTCGGCGAGTTCGTGGCCGACGCGGACATCTCGGACCTGTCGGTCGCGAAGGTGTTCACGCCGGGCAC GCACACGCCGGTGTTCGTGCGCTTCTCGACCGTGATGGGCTACCGCGGCTCGCCCGAGCAGGCGCGCGACCCGCGCGGCT TCGCGACCAAGTTCTATACGAGCGAGGGCAACTGGGATCTGGTGGGCATCAACCTGCCGGTGTTCTTCATCCGCGACGCG ATCAAGTTCCCCGACTTCGTCCACGCCAACAAGCCCAGCGCCGTGACCGGCGTGCAGGACGCGAATCTCGCGTTCGACTT CTTCGCGCACGCGCCCGAAGCCACCCACATGCTTACGCGCCTGTATTCCGACGCGGGCATGCCGAACTCGTACCGCAACA TGGACGGCTTCGGCGTCCACGCGTTCAAGCTGGTGAACGCGCAGGGCGAGGTGCATTACGTGAAGTTCCACTGGAAGAGC CGGCAGGGCATGCACGGCATCCGCCCGCAGGATATTCCCGCCTCGATCGGCCGCGACTGGAACCTGATGTCGAACGACCT GTATGGCGCGCTGAAGAACGGCGACGATCCGAAATGGGATCTCTACATCCAGGTGCTGAAGCCCGAGGATCTCGACAAGT TCGATTACGACGCGCTCGACGACACCAAGGTGTGGAGCGACGTGCCGGAGCGCAAGATCGGCACCATGACGTTGAACCGC ATCCCCGACAACTATTTCGAGAGCACCGAGGAATCGGCGTTCGCGCCGTCGCGGATGGTGCCCGGCATCGAGCCGTCGGA GGACCGCATGCTGCAGGGCCGGATGTTCTCGTATGCCGACACGCAGATGTACCGGCTCGGAGCGAACTTCAACTCACTGC CGATCAACCGGCCGCGCGTGCCGGTGGTCAACAACAACCAGGACGGCCTGATGAACGCGGGCGAGCGCAAGGGCGAGGTG AACTACGAGCCCTCCACGCTCGGCGAGATTCCGCAGGACCCGAAGTACAAGTCCGTGCGCATGCCGCTGCGAGGCACGAC GCAGCAGGCGGCGATTCACAAGACGCTGAATTTCCGCCAGGCCGGCGAGTATTACCGGGGGCTGTCGAAAGAGGACAAGG CCGATCTCGTGACGGCACTGTCGGCCGACCTGAACCATGTGACGAACGACGACAACAAGATCACGATGCTGTCGTACTTC TACAAGGCCGACGCGGATTATGGCAAGCGGCTGGCCGCGGCCACGCATGCCGATCTCTCGCGGGTGCAGGCCAAGGCCGC CACGCTCAGCGATATGTAA
Upstream 100 bases:
>100_bases CATCGTGAATGCCAATTGGCTTTCGAGGTCTCGCGTCAATACGATTCCACCGTCCCGATAACCAAGCACCCAAGTGGTGT CACTTCCTCACGGAGACGGT
Downstream 100 bases:
>100_bases GCGCGGCGGGGCCGTTCGGGGCGCCGCGCGAGGGGCGCTTTCGGGCGGCCTGCCCGATGCTTGCGCGCGGGAGGGTGGCG CTTCGCGCGCCCGCGCCTCG
Product: Catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MKTQSNLSRWAIPAAISLMMSSMACAAGNLTRDNGSPVGDNQNSQTAGPSGPTLLQDSHLVEKLQRFDRERIPERVVHAR GTGAFGEFVADADISDLSVAKVFTPGTHTPVFVRFSTVMGYRGSPEQARDPRGFATKFYTSEGNWDLVGINLPVFFIRDA IKFPDFVHANKPSAVTGVQDANLAFDFFAHAPEATHMLTRLYSDAGMPNSYRNMDGFGVHAFKLVNAQGEVHYVKFHWKS RQGMHGIRPQDIPASIGRDWNLMSNDLYGALKNGDDPKWDLYIQVLKPEDLDKFDYDALDDTKVWSDVPERKIGTMTLNR IPDNYFESTEESAFAPSRMVPGIEPSEDRMLQGRMFSYADTQMYRLGANFNSLPINRPRVPVVNNNQDGLMNAGERKGEV NYEPSTLGEIPQDPKYKSVRMPLRGTTQQAAIHKTLNFRQAGEYYRGLSKEDKADLVTALSADLNHVTNDDNKITMLSYF YKADADYGKRLAAATHADLSRVQAKAATLSDM
Sequences:
>Translated_512_residues MKTQSNLSRWAIPAAISLMMSSMACAAGNLTRDNGSPVGDNQNSQTAGPSGPTLLQDSHLVEKLQRFDRERIPERVVHAR GTGAFGEFVADADISDLSVAKVFTPGTHTPVFVRFSTVMGYRGSPEQARDPRGFATKFYTSEGNWDLVGINLPVFFIRDA IKFPDFVHANKPSAVTGVQDANLAFDFFAHAPEATHMLTRLYSDAGMPNSYRNMDGFGVHAFKLVNAQGEVHYVKFHWKS RQGMHGIRPQDIPASIGRDWNLMSNDLYGALKNGDDPKWDLYIQVLKPEDLDKFDYDALDDTKVWSDVPERKIGTMTLNR IPDNYFESTEESAFAPSRMVPGIEPSEDRMLQGRMFSYADTQMYRLGANFNSLPINRPRVPVVNNNQDGLMNAGERKGEV NYEPSTLGEIPQDPKYKSVRMPLRGTTQQAAIHKTLNFRQAGEYYRGLSKEDKADLVTALSADLNHVTNDDNKITMLSYF YKADADYGKRLAAATHADLSRVQAKAATLSDM >Mature_512_residues MKTQSNLSRWAIPAAISLMMSSMACAAGNLTRDNGSPVGDNQNSQTAGPSGPTLLQDSHLVEKLQRFDRERIPERVVHAR GTGAFGEFVADADISDLSVAKVFTPGTHTPVFVRFSTVMGYRGSPEQARDPRGFATKFYTSEGNWDLVGINLPVFFIRDA IKFPDFVHANKPSAVTGVQDANLAFDFFAHAPEATHMLTRLYSDAGMPNSYRNMDGFGVHAFKLVNAQGEVHYVKFHWKS RQGMHGIRPQDIPASIGRDWNLMSNDLYGALKNGDDPKWDLYIQVLKPEDLDKFDYDALDDTKVWSDVPERKIGTMTLNR IPDNYFESTEESAFAPSRMVPGIEPSEDRMLQGRMFSYADTQMYRLGANFNSLPINRPRVPVVNNNQDGLMNAGERKGEV NYEPSTLGEIPQDPKYKSVRMPLRGTTQQAAIHKTLNFRQAGEYYRGLSKEDKADLVTALSADLNHVTNDDNKITMLSYF YKADADYGKRLAAATHADLSRVQAKAATLSDM
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=480, Percent_Identity=42.2916666666667, Blast_Score=366, Evalue=1e-101, Organism=Escherichia coli, GI48994891, Length=399, Percent_Identity=47.1177944862155, Blast_Score=349, Evalue=2e-97, Organism=Caenorhabditis elegans, GI71998444, Length=469, Percent_Identity=41.7910447761194, Blast_Score=369, Evalue=1e-102, Organism=Caenorhabditis elegans, GI25151141, Length=468, Percent_Identity=42.0940170940171, Blast_Score=356, Evalue=1e-98, Organism=Caenorhabditis elegans, GI25147792, Length=468, Percent_Identity=41.8803418803419, Blast_Score=356, Evalue=2e-98, Organism=Saccharomyces cerevisiae, GI6320462, Length=490, Percent_Identity=38.5714285714286, Blast_Score=306, Evalue=5e-84, Organism=Saccharomyces cerevisiae, GI6321525, Length=343, Percent_Identity=44.8979591836735, Blast_Score=300, Evalue=5e-82, Organism=Drosophila melanogaster, GI17981717, Length=483, Percent_Identity=42.2360248447205, Blast_Score=374, Evalue=1e-103, Organism=Drosophila melanogaster, GI19920968, Length=486, Percent_Identity=38.8888888888889, Blast_Score=345, Evalue=6e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 57090; Mature: 57090
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTQSNLSRWAIPAAISLMMSSMACAAGNLTRDNGSPVGDNQNSQTAGPSGPTLLQDSHL CCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VEKLQRFDRERIPERVVHARGTGAFGEFVADADISDLSVAKVFTPGTHTPVFVRFSTVMG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEHHC YRGSPEQARDPRGFATKFYTSEGNWDLVGINLPVFFIRDAIKFPDFVHANKPSAVTGVQD CCCCCHHHCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCEECCCCCCEECCCC ANLAFDFFAHAPEATHMLTRLYSDAGMPNSYRNMDGFGVHAFKLVNAQGEVHYVKFHWKS CCEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECC RQGMHGIRPQDIPASIGRDWNLMSNDLYGALKNGDDPKWDLYIQVLKPEDLDKFDYDALD CCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCC DTKVWSDVPERKIGTMTLNRIPDNYFESTEESAFAPSRMVPGIEPSEDRMLQGRMFSYAD CCHHHHCCCCCCCCEEECCCCCCHHHHCCCHHHCCCHHCCCCCCCCHHHHHHCCHHHHHC TQMYRLGANFNSLPINRPRVPVVNNNQDGLMNAGERKGEVNYEPSTLGEIPQDPKYKSVR CEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEE MPLRGTTQQAAIHKTLNFRQAGEYYRGLSKEDKADLVTALSADLNHVTNDDNKITMLSYF CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEE YKADADYGKRLAAATHADLSRVQAKAATLSDM ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTQSNLSRWAIPAAISLMMSSMACAAGNLTRDNGSPVGDNQNSQTAGPSGPTLLQDSHL CCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VEKLQRFDRERIPERVVHARGTGAFGEFVADADISDLSVAKVFTPGTHTPVFVRFSTVMG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEHHC YRGSPEQARDPRGFATKFYTSEGNWDLVGINLPVFFIRDAIKFPDFVHANKPSAVTGVQD CCCCCHHHCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCEECCCCCCEECCCC ANLAFDFFAHAPEATHMLTRLYSDAGMPNSYRNMDGFGVHAFKLVNAQGEVHYVKFHWKS CCEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECC RQGMHGIRPQDIPASIGRDWNLMSNDLYGALKNGDDPKWDLYIQVLKPEDLDKFDYDALD CCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCC DTKVWSDVPERKIGTMTLNRIPDNYFESTEESAFAPSRMVPGIEPSEDRMLQGRMFSYAD CCHHHHCCCCCCCCEEECCCCCCHHHHCCCHHHCCCHHCCCCCCCCHHHHHHCCHHHHHC TQMYRLGANFNSLPINRPRVPVVNNNQDGLMNAGERKGEVNYEPSTLGEIPQDPKYKSVR CEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEE MPLRGTTQQAAIHKTLNFRQAGEYYRGLSKEDKADLVTALSADLNHVTNDDNKITMLSYF CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEE YKADADYGKRLAAATHADLSRVQAKAATLSDM ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]