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The map label for this gene is yjiR [C]

Identifier: 238027835

GI number: 238027835

Start: 2471479

End: 2472759

Strand: Reverse

Name: yjiR [C]

Synonym: bglu_1g22660

Alternate gene names: 238027835

Gene position: 2472759-2471479 (Counterclockwise)

Preceding gene: 238027836

Following gene: 238027834

Centisome position: 63.3

GC content: 73.07

Gene sequence:

>1281_bases
TTGACGACTCGAGCAACGGCCGCGGCGTCGCGGCTTTCCGTGATGAACTTCCTGAACGAGGCGGCCAACGATTACCCGCG
GGCGATCTCGTTCGCCTCGGGCCGCCCCGCCGAGCAATTCTTCTCGCTCGAAGGCTGGCTGGCCGCGGTGCCCGACTATC
AGGCCCATGCGGCGCGCGGCGCCGGCCAGAGCATCACGCAGGCCGGCCGGCTGCTGGCGCAGTACGGCCGCACGGCCGGC
ATCATCAACGCGCTGCTGGCCGAGCAGCTCGGCCGCGACGAGGGCGTGGCCTGCGAGGCCGAGCAGGTGGTGGTGACGGC
CGGCTGCCAGGAGGCGCTCGCGCTGCTGGTGCCGGCCCTCTGCCGCGCGCCCGGCGACGTGATGCTGGCGCGCAACCCCA
CCTACATCGGCATCACCGGCGTGGCCGATTTCGCCGGCATCGAGATCCTGCCGATCGGATGCCGGGACGGCGAGACCTGG
GAGCAGGCGCTCGCGCGCGTGGCCGCCGGCCTGCGCCGCGAGGGCAAGACCGCGCGCGGCTTCTATCTCACGCCGGAGTT
CGACAATCCCACCGGCACCGTGCTCGACGAGGCCGAGCGCCGGTCGATCATCGCCGGCTGCCTGGCGCATCGCATCGTCG
TGCTCGAGGACAACCCATACGGGATGTTCCGCTACGACGGCACCTCCACCGCGCCGATGTTCGCGCTCGACCCGGACGGC
TGCGTGATCTATCTGGCCACCTATTCGAAGACGCTGTGCCCGGCCGTGCGCGTGGGCGCGGCGGTGCTGCCGCGGCGCCT
GTTCGGCAGCGAGGCCGCCGCCGCACGGCTGCGCGCCGAACTGTCCGAGCGCAAGAGCTTCGTGACCGTGAACACGAGCC
AGGTCACGCAGGCGCTGGTGGGCGGCGTGCTGCTGCGCGAGGCCGGCAGCCTGGCGCGGCTCGTCGCGGCGCCGCGCGCG
TTCTATCGCGGCAACCGCGACACGCTGCTGGGCGCGCTCGAGCGCGCGTTCGACGGCGGCCGCGGCGCGGTGCGCTGGAA
CCGGCCCGACGGCGGCTTCTTCCTCGGCGTCACGCTGCCGTTCGCGTTCGGCCAGCGCGAGACCGTGGAATGCGCGCGCG
AGCACGGCGTGATCGTGATGCCGATGAGCTTCTTCTCGCTCGACGGCACGCGCCGCGACGAGGTGCGGCTCGCGTTCAGC
AATGCCGGCCCCGAGGCGATCGAGGACGGCGTGCGGCGCTTCGCGGCCTACGTCGGCGCGAAGCGCGGCGCGGCCGCCTG
A

Upstream 100 bases:

>100_bases
TCCAGTCGCTGTTCGATCAACTGGAAAGGTCGGATTCCTACTGAAAAAAATTGCCGCCGGGCCGGCGGTGCCGCGTGATC
TTGCAACCAGGAGAGGGCGC

Downstream 100 bases:

>100_bases
TCCACTCCCGCCGCCGCACGGCGGCCGCGCGGGGATTGGAGTCTTTTAAAAATCGGCTGATATGCCGGCATTTTGATCTG
GTGCCAGGCAATAAATTTCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: AspB-1 [H]

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTTRATAAASRLSVMNFLNEAANDYPRAISFASGRPAEQFFSLEGWLAAVPDYQAHAARGAGQSITQAGRLLAQYGRTAG
IINALLAEQLGRDEGVACEAEQVVVTAGCQEALALLVPALCRAPGDVMLARNPTYIGITGVADFAGIEILPIGCRDGETW
EQALARVAAGLRREGKTARGFYLTPEFDNPTGTVLDEAERRSIIAGCLAHRIVVLEDNPYGMFRYDGTSTAPMFALDPDG
CVIYLATYSKTLCPAVRVGAAVLPRRLFGSEAAAARLRAELSERKSFVTVNTSQVTQALVGGVLLREAGSLARLVAAPRA
FYRGNRDTLLGALERAFDGGRGAVRWNRPDGGFFLGVTLPFAFGQRETVECAREHGVIVMPMSFFSLDGTRRDEVRLAFS
NAGPEAIEDGVRRFAAYVGAKRGAAA

Sequences:

>Translated_426_residues
MTTRATAAASRLSVMNFLNEAANDYPRAISFASGRPAEQFFSLEGWLAAVPDYQAHAARGAGQSITQAGRLLAQYGRTAG
IINALLAEQLGRDEGVACEAEQVVVTAGCQEALALLVPALCRAPGDVMLARNPTYIGITGVADFAGIEILPIGCRDGETW
EQALARVAAGLRREGKTARGFYLTPEFDNPTGTVLDEAERRSIIAGCLAHRIVVLEDNPYGMFRYDGTSTAPMFALDPDG
CVIYLATYSKTLCPAVRVGAAVLPRRLFGSEAAAARLRAELSERKSFVTVNTSQVTQALVGGVLLREAGSLARLVAAPRA
FYRGNRDTLLGALERAFDGGRGAVRWNRPDGGFFLGVTLPFAFGQRETVECAREHGVIVMPMSFFSLDGTRRDEVRLAFS
NAGPEAIEDGVRRFAAYVGAKRGAAA
>Mature_425_residues
TTRATAAASRLSVMNFLNEAANDYPRAISFASGRPAEQFFSLEGWLAAVPDYQAHAARGAGQSITQAGRLLAQYGRTAGI
INALLAEQLGRDEGVACEAEQVVVTAGCQEALALLVPALCRAPGDVMLARNPTYIGITGVADFAGIEILPIGCRDGETWE
QALARVAAGLRREGKTARGFYLTPEFDNPTGTVLDEAERRSIIAGCLAHRIVVLEDNPYGMFRYDGTSTAPMFALDPDGC
VIYLATYSKTLCPAVRVGAAVLPRRLFGSEAAAARLRAELSERKSFVTVNTSQVTQALVGGVLLREAGSLARLVAAPRAF
YRGNRDTLLGALERAFDGGRGAVRWNRPDGGFFLGVTLPFAFGQRETVECAREHGVIVMPMSFFSLDGTRRDEVRLAFSN
AGPEAIEDGVRRFAAYVGAKRGAAA

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=412, Percent_Identity=22.8155339805825, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI33469970, Length=412, Percent_Identity=22.8155339805825, Blast_Score=93, Evalue=4e-19,
Organism=Escherichia coli, GI1790797, Length=319, Percent_Identity=26.3322884012539, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787710, Length=402, Percent_Identity=22.8855721393035, Blast_Score=73, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21356535, Length=366, Percent_Identity=22.9508196721311, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: NA

Molecular weight: Translated: 45504; Mature: 45373

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRATAAASRLSVMNFLNEAANDYPRAISFASGRPAEQFFSLEGWLAAVPDYQAHAARG
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCEEECCCCHHHHHCC
AGQSITQAGRLLAQYGRTAGIINALLAEQLGRDEGVACEAEQVVVTAGCQEALALLVPAL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCCEEEECCHHHHHHHHHHHH
CRAPGDVMLARNPTYIGITGVADFAGIEILPIGCRDGETWEQALARVAAGLRREGKTARG
HCCCCCEEEECCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
FYLTPEFDNPTGTVLDEAERRSIIAGCLAHRIVVLEDNPYGMFRYDGTSTAPMFALDPDG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCCCCCEEEEECCCC
CVIYLATYSKTLCPAVRVGAAVLPRRLFGSEAAAARLRAELSERKSFVTVNTSQVTQALV
CEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHH
GGVLLREAGSLARLVAAPRAFYRGNRDTLLGALERAFDGGRGAVRWNRPDGGFFLGVTLP
HHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECC
FAFGQRETVECAREHGVIVMPMSFFSLDGTRRDEVRLAFSNAGPEAIEDGVRRFAAYVGA
CCCCCHHHHHHHHHCCEEEEEHHHEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
KRGAAA
CCCCCC
>Mature Secondary Structure 
TTRATAAASRLSVMNFLNEAANDYPRAISFASGRPAEQFFSLEGWLAAVPDYQAHAARG
CCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCEEECCCCHHHHHCC
AGQSITQAGRLLAQYGRTAGIINALLAEQLGRDEGVACEAEQVVVTAGCQEALALLVPAL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCCEEEECCHHHHHHHHHHHH
CRAPGDVMLARNPTYIGITGVADFAGIEILPIGCRDGETWEQALARVAAGLRREGKTARG
HCCCCCEEEECCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
FYLTPEFDNPTGTVLDEAERRSIIAGCLAHRIVVLEDNPYGMFRYDGTSTAPMFALDPDG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCCCCCEEEEECCCC
CVIYLATYSKTLCPAVRVGAAVLPRRLFGSEAAAARLRAELSERKSFVTVNTSQVTQALV
CEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHH
GGVLLREAGSLARLVAAPRAFYRGNRDTLLGALERAFDGGRGAVRWNRPDGGFFLGVTLP
HHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECC
FAFGQRETVECAREHGVIVMPMSFFSLDGTRRDEVRLAFSNAGPEAIEDGVRRFAAYVGA
CCCCCHHHHHHHHHCCEEEEEHHHEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
KRGAAA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]