| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027683
Identifier: 238027683
GI number: 238027683
Start: 2295318
End: 2296838
Strand: Direct
Name: 238027683
Synonym: bglu_1g21040
Alternate gene names: NA
Gene position: 2295318-2296838 (Clockwise)
Preceding gene: 238027682
Following gene: 238027684
Centisome position: 58.76
GC content: 64.76
Gene sequence:
>1521_bases GTGCTCGAAGGGCCGCGCCGCGGCCTGGAGATTTCGCCGGAGCTGATTGAGCAACTCAACAAGGCGGACCGCGCGCGCGG CGCGCAGATCGAATGGGCCGACAGGTTCAAGCCGCCCGCAGTCATGCCCGGCACGTTCTCCAAGGGCGAAGGCGCGCCGG TCGTCGCGATGGATTCGGTCTGCGACAACCTGGCCGGCACGCTCGGAACCTGTTCCGGGTTCAACCAGATTGCTGGCGTC GACTTCATCGGCTACGCGGCGCTGTCGCTGCTCTCCCAGCACCCCCTGATTCGCGCGATGGTCGAGACGCTCGCCGACGA GATGACGCGGAAGTGGATCGAGTTCGGCGGCCAGGGCAGCGAGGAGTCGGATGGCGAGCGCGTTAAAGCTCTGCAGGCGG CCACCGAGCGCTTTCACCTGAAGGCGCACTTCAACGCGGCCATGAAGAAGACCGGCTACTTCGGCGGCTGCATGCTGTTC ATGGACTTCGGCGACGACACGAACACGGAAGCTGGCCGGCGCGAGGTCGAGACGCCGATCACGCTCGACAGCGCGAAGAT CACGAAGAACTCGTTCAAGGGCTTCCGCCTCATCGAGCCGATCAACTGCTACCCGGCGCCGTACAACGCCAACAACCCGC TCGCGCCCGGCTACTACCGGCCCGATGCGTGGCTGGTGCAGGGGCGCAAGGTACACGCCTCGCGCATGCTCCACTTCGTC CAGAACGATCCGCCGGTGCTGCTTCGTCCGGCCTACAACTTCTTCGGCATCCCACTCGCACAGCAGGCGCTCGATTATGT CGACCGGTTCGACACTGTGCGCATCGCTGTCGCGAAGCTCGTGAAGCGATTCAGCACGTCGATCCTGAAGACGGACATGA GCCAGATTCTTCAGGGCGGTGGTTACAACGATGCGTCGTCTCTGCAGGGGCGGGCACTTCTCTGGTCGCTGGCCGGATCA AACGAAGGCCTGCTCATGCTCGACAAGGAAGCCGAGGATTTCGCCCAGCAGAACACGCCTCTGTCCGGCCTGGCCGAGAT TGTCTCGCAGCAGCTCGAGCTGCTCGCCGCGATCAGCCGCACGCCTGCCGTCAAGCTCCTCGGCATCGCGCCAAGCGGCT TCAACTCGACCGGCGAGTACGACGAGGCGAACTGGTACGACCATGTCGCCAGCCAGCAGTCGATCGTGTTCGGCGACAAC CTCGACCGAGCGATCAAGGTGATCCAGCTCAGCGAGACTGGCGCGATCGATGAGGATCTGACGCACCGCTTCGTTCCGCT GCACGAGCAGTCGGAGGTTGAGAAGTCGGCCATCCGCAAGCAGAACGCCGACGCGTTCGCGATCTACTACGACCGCGGCG TGCTGTCGAACGAGGAGGAGCGCACGCGCCTGGCGGCCGACCCCGATAGCGGCTACGACTCGATCGACGTCGACGATCTG CCCGAACCGCCAGGCGGCGCCGGTGGCGAAGGTGAGGAAAGCGAAGACGTCGACACGGACAGCGCCGGCAAGGTGTCCTG A
Upstream 100 bases:
>100_bases GCTGAGTAAAATCCGCTCCCTCATCGGCGGCATGCCGCTTGCCCCGAACTCACCGGCCGTTGCGACGGATTCCGCGCCGC GCGCTGAGCCGCACTGGCCT
Downstream 100 bases:
>100_bases TGCCGGCCCGCGCGCCGAAAGCCAAGGGCGAGATGCGCCCCACCCGGCCGAGCGCGGCGGTGCGCATCGCCTATCAGCGG TCGCTCGACAATCTGATTGC
Product: HI1409 family phage-associated protein
Products: NA
Alternate protein names: Bacteriophage Protein; Phage-Related Protein; Phage Portal Protein; Phage-Like Protein; Phage-Related Protein Family Protein
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MLEGPRRGLEISPELIEQLNKADRARGAQIEWADRFKPPAVMPGTFSKGEGAPVVAMDSVCDNLAGTLGTCSGFNQIAGV DFIGYAALSLLSQHPLIRAMVETLADEMTRKWIEFGGQGSEESDGERVKALQAATERFHLKAHFNAAMKKTGYFGGCMLF MDFGDDTNTEAGRREVETPITLDSAKITKNSFKGFRLIEPINCYPAPYNANNPLAPGYYRPDAWLVQGRKVHASRMLHFV QNDPPVLLRPAYNFFGIPLAQQALDYVDRFDTVRIAVAKLVKRFSTSILKTDMSQILQGGGYNDASSLQGRALLWSLAGS NEGLLMLDKEAEDFAQQNTPLSGLAEIVSQQLELLAAISRTPAVKLLGIAPSGFNSTGEYDEANWYDHVASQQSIVFGDN LDRAIKVIQLSETGAIDEDLTHRFVPLHEQSEVEKSAIRKQNADAFAIYYDRGVLSNEEERTRLAADPDSGYDSIDVDDL PEPPGGAGGEGEESEDVDTDSAGKVS
Sequences:
>Translated_506_residues MLEGPRRGLEISPELIEQLNKADRARGAQIEWADRFKPPAVMPGTFSKGEGAPVVAMDSVCDNLAGTLGTCSGFNQIAGV DFIGYAALSLLSQHPLIRAMVETLADEMTRKWIEFGGQGSEESDGERVKALQAATERFHLKAHFNAAMKKTGYFGGCMLF MDFGDDTNTEAGRREVETPITLDSAKITKNSFKGFRLIEPINCYPAPYNANNPLAPGYYRPDAWLVQGRKVHASRMLHFV QNDPPVLLRPAYNFFGIPLAQQALDYVDRFDTVRIAVAKLVKRFSTSILKTDMSQILQGGGYNDASSLQGRALLWSLAGS NEGLLMLDKEAEDFAQQNTPLSGLAEIVSQQLELLAAISRTPAVKLLGIAPSGFNSTGEYDEANWYDHVASQQSIVFGDN LDRAIKVIQLSETGAIDEDLTHRFVPLHEQSEVEKSAIRKQNADAFAIYYDRGVLSNEEERTRLAADPDSGYDSIDVDDL PEPPGGAGGEGEESEDVDTDSAGKVS >Mature_506_residues MLEGPRRGLEISPELIEQLNKADRARGAQIEWADRFKPPAVMPGTFSKGEGAPVVAMDSVCDNLAGTLGTCSGFNQIAGV DFIGYAALSLLSQHPLIRAMVETLADEMTRKWIEFGGQGSEESDGERVKALQAATERFHLKAHFNAAMKKTGYFGGCMLF MDFGDDTNTEAGRREVETPITLDSAKITKNSFKGFRLIEPINCYPAPYNANNPLAPGYYRPDAWLVQGRKVHASRMLHFV QNDPPVLLRPAYNFFGIPLAQQALDYVDRFDTVRIAVAKLVKRFSTSILKTDMSQILQGGGYNDASSLQGRALLWSLAGS NEGLLMLDKEAEDFAQQNTPLSGLAEIVSQQLELLAAISRTPAVKLLGIAPSGFNSTGEYDEANWYDHVASQQSIVFGDN LDRAIKVIQLSETGAIDEDLTHRFVPLHEQSEVEKSAIRKQNADAFAIYYDRGVLSNEEERTRLAADPDSGYDSIDVDDL PEPPGGAGGEGEESEDVDTDSAGKVS
Specific function: Unknown
COG id: COG3567
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55281; Mature: 55281
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEGPRRGLEISPELIEQLNKADRARGAQIEWADRFKPPAVMPGTFSKGEGAPVVAMDSV CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCCCCCCCCEEEHHHH CDNLAGTLGTCSGFNQIAGVDFIGYAALSLLSQHPLIRAMVETLADEMTRKWIEFGGQGS HHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC EESDGERVKALQAATERFHLKAHFNAAMKKTGYFGGCMLFMDFGDDTNTEAGRREVETPI CCCCHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHCCCCE TLDSAKITKNSFKGFRLIEPINCYPAPYNANNPLAPGYYRPDAWLVQGRKVHASRMLHFV EECCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH QNDPPVLLRPAYNFFGIPLAQQALDYVDRFDTVRIAVAKLVKRFSTSILKTDMSQILQGG CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYNDASSLQGRALLWSLAGSNEGLLMLDKEAEDFAQQNTPLSGLAEIVSQQLELLAAISR CCCCHHHCCCCEEEEEECCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC TPAVKLLGIAPSGFNSTGEYDEANWYDHVASQQSIVFGDNLDRAIKVIQLSETGAIDEDL CCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCHHEEEEEECCCCCCCHHH THRFVPLHEQSEVEKSAIRKQNADAFAIYYDRGVLSNEEERTRLAADPDSGYDSIDVDDL HHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCC PEPPGGAGGEGEESEDVDTDSAGKVS CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLEGPRRGLEISPELIEQLNKADRARGAQIEWADRFKPPAVMPGTFSKGEGAPVVAMDSV CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCCCCCCCCEEEHHHH CDNLAGTLGTCSGFNQIAGVDFIGYAALSLLSQHPLIRAMVETLADEMTRKWIEFGGQGS HHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC EESDGERVKALQAATERFHLKAHFNAAMKKTGYFGGCMLFMDFGDDTNTEAGRREVETPI CCCCHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHCCCCE TLDSAKITKNSFKGFRLIEPINCYPAPYNANNPLAPGYYRPDAWLVQGRKVHASRMLHFV EECCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH QNDPPVLLRPAYNFFGIPLAQQALDYVDRFDTVRIAVAKLVKRFSTSILKTDMSQILQGG CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYNDASSLQGRALLWSLAGSNEGLLMLDKEAEDFAQQNTPLSGLAEIVSQQLELLAAISR CCCCHHHCCCCEEEEEECCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC TPAVKLLGIAPSGFNSTGEYDEANWYDHVASQQSIVFGDNLDRAIKVIQLSETGAIDEDL CCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCHHEEEEEECCCCCCCHHH THRFVPLHEQSEVEKSAIRKQNADAFAIYYDRGVLSNEEERTRLAADPDSGYDSIDVDDL HHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCC PEPPGGAGGEGEESEDVDTDSAGKVS CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA