Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is uidR [C]

Identifier: 238027549

GI number: 238027549

Start: 2150683

End: 2151480

Strand: Direct

Name: uidR [C]

Synonym: bglu_1g19670

Alternate gene names: 238027549

Gene position: 2150683-2151480 (Clockwise)

Preceding gene: 238027548

Following gene: 238027550

Centisome position: 55.05

GC content: 69.67

Gene sequence:

>798_bases
ATGGCGGTTCGGCAAGCCAGCCGGCAAACCGGCGGCACGAAGGCGCGCATTCTCGACGCAGCGGAAGACCTGTTCGTCGA
ACATGGTTTCGAAGCGATGTCGATGCGGCAGATCACATCACGCGCCGCGGTGAATCTCGCGGCGGTCAATTACCACTTCG
GCAGCAAGGAGGCGCTGATCCACGCGATGCTGTCGCGTCGCCTCGACCAGCTCAACGACGAGCGGCTGCGCATCCTCGAC
CGCTTCGAGGCCCAGCTCGGCGAAGCCATCACCTGCGAGCACGTGCTCGGCGCGATGTTCATCCCGGCGCTGCAGGCCTC
GCGCGATCCGCAGCGCGGCGGCCGCGCGTTCCTGCGCCTGATCGGCCGCGCCTACACCGACCCCTCCACCTTCGTGCGCG
GCTTTCTGGCCGCGCATTACGCGAGCGTGGCCGGCCGCTTCTTCGATGCGTTCCAGCGCGCGCTGCCGCTGTTGCCGCGC
GCCGAGCTGGGCTGGCGCCTGCACTATGCGATCGGCGCGCTGTCGGGCGCGCTCGCGGGTGCCGAGACCGACAGCCTGCT
CGACGATTTCTCGCAGGGCCGCACCATGAACGACGTACAGCTGATCGCGCGCCTGTCCTCGCTGATCGTGGCCGCGCTGA
AGGCACCGATGCCGGACACGGCGCAGATGTCGATCTTCGCGGCCGTGCTCGACGATGCGCAGCGCGGCAGCATCGCGCCG
CCGAATGGCGGCGAGCTGCCGTCGGGACCGTTCGGCGCGTCGGCCGGCACGCGGCTGCATGCGCGGCACGCGTCTTGA

Upstream 100 bases:

>100_bases
CCGCCCGCCCCCGCGCCTTTTTATCTTAATAAAAACGCTTGTTTCAATTACCGATTTGAATCGCTCGTTCGATAACCGAA
ACAGTGATCATGGAGGCGAC

Downstream 100 bases:

>100_bases
CGCGCGGCCCGCGCACGGCTCACGCACGGAATCGGCAGCACCAGTGCCCGCGGGCACCGCAGACGCGCTCGCCAGCCCAA
CCCAAGAACGGCACGCGCCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcriptional Regulator PsrA; TetR Family Regulatory Protein; Regulatory Protein Tetr; Transcription Regulator Protein; PsrA Protein; TetR Family Transcription Factor; TRANSCRIPTIONal REGULATOR TetR Family; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; Transcliptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MAVRQASRQTGGTKARILDAAEDLFVEHGFEAMSMRQITSRAAVNLAAVNYHFGSKEALIHAMLSRRLDQLNDERLRILD
RFEAQLGEAITCEHVLGAMFIPALQASRDPQRGGRAFLRLIGRAYTDPSTFVRGFLAAHYASVAGRFFDAFQRALPLLPR
AELGWRLHYAIGALSGALAGAETDSLLDDFSQGRTMNDVQLIARLSSLIVAALKAPMPDTAQMSIFAAVLDDAQRGSIAP
PNGGELPSGPFGASAGTRLHARHAS

Sequences:

>Translated_265_residues
MAVRQASRQTGGTKARILDAAEDLFVEHGFEAMSMRQITSRAAVNLAAVNYHFGSKEALIHAMLSRRLDQLNDERLRILD
RFEAQLGEAITCEHVLGAMFIPALQASRDPQRGGRAFLRLIGRAYTDPSTFVRGFLAAHYASVAGRFFDAFQRALPLLPR
AELGWRLHYAIGALSGALAGAETDSLLDDFSQGRTMNDVQLIARLSSLIVAALKAPMPDTAQMSIFAAVLDDAQRGSIAP
PNGGELPSGPFGASAGTRLHARHAS
>Mature_264_residues
AVRQASRQTGGTKARILDAAEDLFVEHGFEAMSMRQITSRAAVNLAAVNYHFGSKEALIHAMLSRRLDQLNDERLRILDR
FEAQLGEAITCEHVLGAMFIPALQASRDPQRGGRAFLRLIGRAYTDPSTFVRGFLAAHYASVAGRFFDAFQRALPLLPRA
ELGWRLHYAIGALSGALAGAETDSLLDDFSQGRTMNDVQLIARLSSLIVAALKAPMPDTAQMSIFAAVLDDAQRGSIAPP
NGGELPSGPFGASAGTRLHARHAS

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28598; Mature: 28467

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRQASRQTGGTKARILDAAEDLFVEHGFEAMSMRQITSRAAVNLAAVNYHFGSKEALI
CCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH
HAMLSRRLDQLNDERLRILDRFEAQLGEAITCEHVLGAMFIPALQASRDPQRGGRAFLRL
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IGRAYTDPSTFVRGFLAAHYASVAGRFFDAFQRALPLLPRAELGWRLHYAIGALSGALAG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHCC
AETDSLLDDFSQGRTMNDVQLIARLSSLIVAALKAPMPDTAQMSIFAAVLDDAQRGSIAP
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
PNGGELPSGPFGASAGTRLHARHAS
CCCCCCCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure 
AVRQASRQTGGTKARILDAAEDLFVEHGFEAMSMRQITSRAAVNLAAVNYHFGSKEALI
CCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH
HAMLSRRLDQLNDERLRILDRFEAQLGEAITCEHVLGAMFIPALQASRDPQRGGRAFLRL
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IGRAYTDPSTFVRGFLAAHYASVAGRFFDAFQRALPLLPRAELGWRLHYAIGALSGALAG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHCC
AETDSLLDDFSQGRTMNDVQLIARLSSLIVAALKAPMPDTAQMSIFAAVLDDAQRGSIAP
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
PNGGELPSGPFGASAGTRLHARHAS
CCCCCCCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA