Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is gal [H]

Identifier: 238027388

GI number: 238027388

Start: 1959523

End: 1960461

Strand: Reverse

Name: gal [H]

Synonym: bglu_1g17840

Alternate gene names: 238027388

Gene position: 1960461-1959523 (Counterclockwise)

Preceding gene: 238027389

Following gene: 238027387

Centisome position: 50.18

GC content: 71.99

Gene sequence:

>939_bases
ATGACCATCAACACGACTACCTATACCCTCGGCATCGTCGGCGTCGGCAAGATCGCGCGCGACCAGCACCTGCCCGCCAT
CGCCACCAATCCGGGCTTCCAGCTGGTGGCCGCCGCGAGCCGTAACGCGCAGGTCGAGGCGGTGCGCAACTACCCCGATC
TCGCGGCGCTGCTGGCCGCCGAGCCGGGCCTTCACGCCGTCTCGCTGTGTGCCCCGCCGCAGGTCCGCTACGAGCAGGCG
CGCGCCGCGCTGCTGGCCGGCAAGCACGTGATGCTCGAAAAGCCGCCCGGCGCCGGCGTGAGCGAGGTGGAGGCGCTGCG
CGCGCTGGCGCGCCAGCACAACCGCACGCTGTTCGCCACCTGGCATTCGCGCCATGCGAGCGCGGTGGAGCCGGCCCGCG
CCTGGCTGGCCGGACGCGAGGTGCGCGAGGTGCAGGTGCGCTGGAAGGAGGACGTGCGGCGCTGGCATCCCGGGCAGCAG
TGGATCTGGGAGGCGGGCGGCCTCGGCGTGTTCGATCCGGGCATCAACGCGCTGTCGATCGTCACGCAGATCCTGCCGAA
CCCGGTGCTGCTGCGCGCGGCCACGCTGCACGTGCCGGCCGACTGCGCGACGCCGATCGCCGCCGAGCTGGACTGCGTGG
ACGCGGCCGGCGCGCCGGTGCGCGCCGAATTCGACTGGCGCCACGGCCCGGTCGAGCAATGGGAGATCGATGTCGACACC
GCCGACGGACGGCTGTCGATCGCCGAGGGCGGCAAGCGCCTGACGATTGCCGGCGAGGCGGTCGCGCTCGATGCCGAGCG
CGAATACGCCTCGCTCTACGAGCGGTTCCACTGGCTGATCGGCCATGGCACCGACGACGTCGACGTGAGCCCGCTGCGGC
TCGTGGCCGACGCATTCATGCTGGGCAAGCACGTCGAGGTCGAGCCGTTCGGTCACTGA

Upstream 100 bases:

>100_bases
GCTGCCGGCCATCCATCCGGACACGCGCGCCGAGCTGCTCGCGATCGCGCGCCGGCTCGACCCGCTCGTGCTGCGCTGGG
GCAAGTGAGATCCACGGACC

Downstream 100 bases:

>100_bases
ACGGCCCGGCCTCGATCATCACCATAACCGAGGAGACAGAAACATGATTCGCAACACCCGCCGCCTGACCCTGCGCGTCC
TGCTCGCAGCCATGTGCGCC

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAAEPGLHAVSLCAPPQVRYEQA
RAALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFATWHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQ
WIWEAGGLGVFDPGINALSIVTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDT
ADGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFMLGKHVEVEPFGH

Sequences:

>Translated_312_residues
MTINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAAEPGLHAVSLCAPPQVRYEQA
RAALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFATWHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQ
WIWEAGGLGVFDPGINALSIVTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDT
ADGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFMLGKHVEVEPFGH
>Mature_311_residues
TINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAAEPGLHAVSLCAPPQVRYEQAR
AALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFATWHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQW
IWEAGGLGVFDPGINALSIVTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDTA
DGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFMLGKHVEVEPFGH

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787574, Length=194, Percent_Identity=29.3814432989691, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: =1.1.1.48 [H]

Molecular weight: Translated: 33915; Mature: 33784

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAA
CEECCEEEEEEEEECCCHHHCCCCCEEECCCCEEEEEECCCCCEEEEECCCCHHHHHHHC
EPGLHAVSLCAPPQVRYEQARAALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFAT
CCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEE
WHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQWIWEAGGLGVFDPGINALSI
ECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCEEECCCCHHHHH
VTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDT
HHHHCCCCEEEEEEEEECCCCCCCCCHHCCEEECCCCCCEEEECCCCCCCCCEEEEEEEC
ADGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFM
CCCEEEECCCCCEEEEECCEEEECCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH
LGKHVEVEPFGH
HCCCEEECCCCC
>Mature Secondary Structure 
TINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAA
EECCEEEEEEEEECCCHHHCCCCCEEECCCCEEEEEECCCCCEEEEECCCCHHHHHHHC
EPGLHAVSLCAPPQVRYEQARAALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFAT
CCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEE
WHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQWIWEAGGLGVFDPGINALSI
ECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCEEECCCCHHHHH
VTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDT
HHHHCCCCEEEEEEEEECCCCCCCCCHHCCEEECCCCCCEEEECCCCCCCCCEEEEEEEC
ADGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFM
CCCEEEECCCCCEEEEECCEEEECCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH
LGKHVEVEPFGH
HCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2503815 [H]