| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027361
Identifier: 238027361
GI number: 238027361
Start: 1927257
End: 1927877
Strand: Reverse
Name: 238027361
Synonym: bglu_1g17510
Alternate gene names: NA
Gene position: 1927877-1927257 (Counterclockwise)
Preceding gene: 238027362
Following gene: 238027360
Centisome position: 49.35
GC content: 57.81
Gene sequence:
>621_bases ATGCCGCACACGAAACCGACCAAGATCGACACGAACACACAAACGGGCTCGCAAAAAGAAGTCCCCGTGAAGGCGATCAC ATTCAAAGAACTTTGGGACGCCTACCCTTCCGGCGACCCGTACGACAACCCGGATTACACGAATCAGTGCGCTATCCGCT TGAGCGTGACCTTGCACCGCGTCGGCGTCGGCATGAAGTCGTTTTCTCAGAAAACGGTCAAGCCCATGTCCGGATCACCG ACCATCGGCCGAATCATGCTCGATGGAAAGCCGACGGCGACGCGTGCCGATGAACTCGGCGAATGGTTACAACATCAGCC CTTCGCGGGACTGCCGAAAGCCGAAAACATCACCGGCGCCGATTGGGAATCCAAGGTGAAGGGGCGCACCGGCATAATCC AGTTCTCGCGCTACTGGACACGCGAAGGCGAAGCCGCAGGGAACGCGAGCGGCGGGCACATCGATTTGTGGAATGGCTCG CGCCTGACCGTGAGCAGCGCACCTGATGCTGTCGCAACGTTTAGCCGGGTGCTCGGGTTTCAGGCGTTCGCACCCGGAAC GTCGTTCGGGTGGTCTGATCTTCGGAATTCGAAGCAAATTCTTTTCTGGGAAATCAAATAA
Upstream 100 bases:
>100_bases GAGCGGGACATTGCCGCGTGTCTACACCGGAGACGATCCGGGCTCCTATACCGTTCATTGGGGCGACGACGCGCTCGCCA TGCAACACGGGGAATGATCG
Downstream 100 bases:
>100_bases TGCGGCGTCTATTGGGAACGATCGGATTCGCGATTGCGGGGCTCGTCAGCGTGATCGCGTGGTCTGCGGTCGATTCTCGC CTATGCACGGTCATCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MPHTKPTKIDTNTQTGSQKEVPVKAITFKELWDAYPSGDPYDNPDYTNQCAIRLSVTLHRVGVGMKSFSQKTVKPMSGSP TIGRIMLDGKPTATRADELGEWLQHQPFAGLPKAENITGADWESKVKGRTGIIQFSRYWTREGEAAGNASGGHIDLWNGS RLTVSSAPDAVATFSRVLGFQAFAPGTSFGWSDLRNSKQILFWEIK
Sequences:
>Translated_206_residues MPHTKPTKIDTNTQTGSQKEVPVKAITFKELWDAYPSGDPYDNPDYTNQCAIRLSVTLHRVGVGMKSFSQKTVKPMSGSP TIGRIMLDGKPTATRADELGEWLQHQPFAGLPKAENITGADWESKVKGRTGIIQFSRYWTREGEAAGNASGGHIDLWNGS RLTVSSAPDAVATFSRVLGFQAFAPGTSFGWSDLRNSKQILFWEIK >Mature_205_residues PHTKPTKIDTNTQTGSQKEVPVKAITFKELWDAYPSGDPYDNPDYTNQCAIRLSVTLHRVGVGMKSFSQKTVKPMSGSPT IGRIMLDGKPTATRADELGEWLQHQPFAGLPKAENITGADWESKVKGRTGIIQFSRYWTREGEAAGNASGGHIDLWNGSR LTVSSAPDAVATFSRVLGFQAFAPGTSFGWSDLRNSKQILFWEIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22647; Mature: 22515
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHTKPTKIDTNTQTGSQKEVPVKAITFKELWDAYPSGDPYDNPDYTNQCAIRLSVTLHR CCCCCCCEECCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEE VGVGMKSFSQKTVKPMSGSPTIGRIMLDGKPTATRADELGEWLQHQPFAGLPKAENITGA HHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC DWESKVKGRTGIIQFSRYWTREGEAAGNASGGHIDLWNGSRLTVSSAPDAVATFSRVLGF CCHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHCC QAFAPGTSFGWSDLRNSKQILFWEIK HHCCCCCCCCHHHHCCCCEEEEEEEC >Mature Secondary Structure PHTKPTKIDTNTQTGSQKEVPVKAITFKELWDAYPSGDPYDNPDYTNQCAIRLSVTLHR CCCCCCEECCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEE VGVGMKSFSQKTVKPMSGSPTIGRIMLDGKPTATRADELGEWLQHQPFAGLPKAENITGA HHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC DWESKVKGRTGIIQFSRYWTREGEAAGNASGGHIDLWNGSRLTVSSAPDAVATFSRVLGF CCHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHCC QAFAPGTSFGWSDLRNSKQILFWEIK HHCCCCCCCCHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA