| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027360
Identifier: 238027360
GI number: 238027360
Start: 1926919
End: 1927257
Strand: Reverse
Name: 238027360
Synonym: bglu_1g17500
Alternate gene names: NA
Gene position: 1927257-1926919 (Counterclockwise)
Preceding gene: 238027361
Following gene: 238027334
Centisome position: 49.33
GC content: 60.47
Gene sequence:
>339_bases ATGCGGCGTCTATTGGGAACGATCGGATTCGCGATTGCGGGGCTCGTCAGCGTGATCGCGTGGTCTGCGGTCGATTCTCG CCTATGCACGGTCATCAAAAATTGGTGTACGCCACCGGCCGGGACGTGCGGCGGCGGCGTCGACGCATGCGCCGCAACGA CACACGCCACAATGGATCTGTTCGTGTACTTGTTCGGCCCGCCGATCCTGTTCGCAGCGCTCGGTTTTCTCGTGTTTGCC CGTCGGCCACCGGCGCATATCGTCGTCGCGTACCTTGTCTGCGCGGTGATCGCGCAATGGATACTGTGGTTCGTTGGGAT TCGGATTCTGCATATCTGA
Upstream 100 bases:
>100_bases TTAGCCGGGTGCTCGGGTTTCAGGCGTTCGCACCCGGAACGTCGTTCGGGTGGTCTGATCTTCGGAATTCGAAGCAAATT CTTTTCTGGGAAATCAAATA
Downstream 100 bases:
>100_bases CGCTTCCCGGTTCAACAAAAAAGCCCGCACGTGCGGGCTTTTTCTATGGCTTCCGATACTGCACCGCATACGGGCCGTCC GTTTGACCCACTATCATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MRRLLGTIGFAIAGLVSVIAWSAVDSRLCTVIKNWCTPPAGTCGGGVDACAATTHATMDLFVYLFGPPILFAALGFLVFA RRPPAHIVVAYLVCAVIAQWILWFVGIRILHI
Sequences:
>Translated_112_residues MRRLLGTIGFAIAGLVSVIAWSAVDSRLCTVIKNWCTPPAGTCGGGVDACAATTHATMDLFVYLFGPPILFAALGFLVFA RRPPAHIVVAYLVCAVIAQWILWFVGIRILHI >Mature_112_residues MRRLLGTIGFAIAGLVSVIAWSAVDSRLCTVIKNWCTPPAGTCGGGVDACAATTHATMDLFVYLFGPPILFAALGFLVFA RRPPAHIVVAYLVCAVIAQWILWFVGIRILHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12014; Mature: 12014
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLGTIGFAIAGLVSVIAWSAVDSRLCTVIKNWCTPPAGTCGGGVDACAATTHATMDL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH FVYLFGPPILFAALGFLVFARRPPAHIVVAYLVCAVIAQWILWFVGIRILHI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRLLGTIGFAIAGLVSVIAWSAVDSRLCTVIKNWCTPPAGTCGGGVDACAATTHATMDL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH FVYLFGPPILFAALGFLVFARRPPAHIVVAYLVCAVIAQWILWFVGIRILHI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA