| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is fdxA [H]
Identifier: 238027280
GI number: 238027280
Start: 1834945
End: 1835280
Strand: Direct
Name: fdxA [H]
Synonym: bglu_1g16670
Alternate gene names: 238027280
Gene position: 1834945-1835280 (Clockwise)
Preceding gene: 238027279
Following gene: 238027281
Centisome position: 46.97
GC content: 63.99
Gene sequence:
>336_bases ATGACCTATGTCGTGACCGAGAACTGCATCCAGTGCAAGCACACCGATTGCGTCGACGTGTGTCCCGTCGACTGCTTTCA CGAAGGCGAGAACTTCCTCGCGATCGATCCCGACGAATGCATCGACTGCGGCGTGTGCGAACCCGAATGCCCGGTGGACG CGATCCGCCAGGACAGCGCACTCGCCCCCGAGCAGCGCATCTTCCTCGACCTGAACCGCGAGCTGGCGCAGAACTGGCCC AGCATCACCAGCAAGCGGGCGGCACTGCCCGACGCCGCGCGCTGGAAGGACGTCGAGGGCAAGCTCGAACACCTGAAGCG CGACGTGATCGCGTAA
Upstream 100 bases:
>100_bases GCGAGACAGGAGCCGGCTGCCCGCCACACCCGACAGCAGAACCCGCAACGCAACCAACGCCTCACCCCAGCGAACCCTCA TCGTCCCCAGGAGAAATTCG
Downstream 100 bases:
>100_bases GGCGAGGGAGCCGGCATGTCGAATTCCTCCACCCTCGCGCCGGGCGCCGCCGCCCCGGTCCGGCCGCATCGCCGCATGCT GCCGCTGCTGCTGATCGGGC
Product: 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
Products: NA
Alternate protein names: Ferredoxin I; FdI [H]
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTYVVTENCIQCKHTDCVDVCPVDCFHEGENFLAIDPDECIDCGVCEPECPVDAIRQDSALAPEQRIFLDLNRELAQNWP SITSKRAALPDAARWKDVEGKLEHLKRDVIA
Sequences:
>Translated_111_residues MTYVVTENCIQCKHTDCVDVCPVDCFHEGENFLAIDPDECIDCGVCEPECPVDAIRQDSALAPEQRIFLDLNRELAQNWP SITSKRAALPDAARWKDVEGKLEHLKRDVIA >Mature_110_residues TYVVTENCIQCKHTDCVDVCPVDCFHEGENFLAIDPDECIDCGVCEPECPVDAIRQDSALAPEQRIFLDLNRELAQNWPS ITSKRAALPDAARWKDVEGKLEHLKRDVIA
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA [H]
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR000813 - InterPro: IPR022569 [H]
Pfam domain/function: PF11953 DUF3470 [H]
EC number: NA
Molecular weight: Translated: 12502; Mature: 12371
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYVVTENCIQCKHTDCVDVCPVDCFHEGENFLAIDPDECIDCGVCEPECPVDAIRQDSA CEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEECHHHHCCCCCCCCCCCHHHHCCCCC LAPEQRIFLDLNRELAQNWPSITSKRAALPDAARWKDVEGKLEHLKRDVIA CCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TYVVTENCIQCKHTDCVDVCPVDCFHEGENFLAIDPDECIDCGVCEPECPVDAIRQDSA EEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEECHHHHCCCCCCCCCCCHHHHCCCCC LAPEQRIFLDLNRELAQNWPSITSKRAALPDAARWKDVEGKLEHLKRDVIA CCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2826477; 8244942; 6848518; 7120409; 3422475; 2926817; 9600844; 10387068; 10593945; 1855590; 2153958; 1657971; 8132582 [H]