| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027279
Identifier: 238027279
GI number: 238027279
Start: 1833706
End: 1834818
Strand: Direct
Name: 238027279
Synonym: bglu_1g16660
Alternate gene names: NA
Gene position: 1833706-1834818 (Clockwise)
Preceding gene: 238027278
Following gene: 238027280
Centisome position: 46.94
GC content: 75.38
Gene sequence:
>1113_bases ATGTCCGCGCAACCCGTTTTCGCTGACCCGGCCGCGGCCGCCGCGCCGCCCGCCTCGCCGTTCCTGATCGAGGCGGATCT CGACGCCGCGCGCTGCCTGCGCCTTGCCGGCTCGCGCCGCGAGGTCGGCCGCCAGCACGGCGCGGCGCTGCGCGAGCCGA TCGCGCGCTTTCTCGGCGATCGCGTCACGCGGCTCGAGCCGCTCGTCTCGGCACGCCGCCTGCACGAGTTCGCGCCGCTG ATCGCCAGCCACACCCGCGAGATCGAACGCGTGCTGCCCGAGCTGGCCGAGGAAATCCACGGCCTGGCCGAGGGCGCCGA CATCGCCACCGAGGATGCGTTCCTGCTGCAGCTGCGCCGCGAGCTGTCGGGTTTCCAGCGGATTCCGGCGCGCGGCGATT GCACCACCTTCGGGCGGCATGCCGGCGGCGAATCGATCGTCGCGCAGACCATCGACCTGAACGGCGACATGGCCGGCGAG CTGAACGTGCTCGAGATCGCCGGCGCCCCGGGCGCGGCGCGGCCGGCCGGCGTGGCGCTGCTCAGCTTCACGGGCCTGGT CGGCTACCTCGGCATCAACGATCGCGGCCTCGCGATCGGGCTGAACCTGGTGCTCGGCGGCCAGTGGCGGCCCGGCATCC CCGGCTACCTGGCGATCCGCCATCTGCTCGAGCGCTGCGCGAGCGTGGACGAATGCCTCGACACGCTGCAGGCGCTGCCG CTCGCGAGCTCGCGCGCGCTGACGATCGCCGACGCGGCGCGCGTGGTGACGGTGGAGTACACGCCCGATGCGCTGGTGGT GCTGGAGGGCGCGCAGCACGCGCACGCGAACCACTTCCTGCACCCCGGGCTCGCGTCCGACGACGCGCTCAATCCGTTCG CGCGCAGCTCGTCGCTGCGCCGGCTCGAGGCCTGCCGCGAGCTGCTGGCGAGCCTGCCGGCCGGGGCCGACGCGCGCGCC TGTCTCGACGGCCTGGCGCGCGCGCCGATCGAGGTGCCGCCCACCGGCGACGTGCGCCGCGAATGCACGGTGGCCTCGGT GGCGATGTTCCCCGCGCGCCGCGCGCTGCACGTGCGCGGCCGGCCGGCCGCGCCGCCCGCGGCAGGGGCCTGA
Upstream 100 bases:
>100_bases GGCGCGACCGAGGAAGGCGTGATGCGCAGCTTCAACTTCATGCCGAGCGGCCGGCGCCGCGACGCGGTCTATTACTCGAT CCTCAAATCGGAGTGGCCCG
Downstream 100 bases:
>100_bases GCCGTGCTCCGGCCGCCGCGGCGCAGGCGAGACAGGAGCCGGCTGCCCGCCACACCCGACAGCAGAACCCGCAACGCAAC CAACGCCTCACCCCAGCGAA
Product: peptidase C45
Products: NA
Alternate protein names: Peptidase C
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MSAQPVFADPAAAAAPPASPFLIEADLDAARCLRLAGSRREVGRQHGAALREPIARFLGDRVTRLEPLVSARRLHEFAPL IASHTREIERVLPELAEEIHGLAEGADIATEDAFLLQLRRELSGFQRIPARGDCTTFGRHAGGESIVAQTIDLNGDMAGE LNVLEIAGAPGAARPAGVALLSFTGLVGYLGINDRGLAIGLNLVLGGQWRPGIPGYLAIRHLLERCASVDECLDTLQALP LASSRALTIADAARVVTVEYTPDALVVLEGAQHAHANHFLHPGLASDDALNPFARSSSLRRLEACRELLASLPAGADARA CLDGLARAPIEVPPTGDVRRECTVASVAMFPARRALHVRGRPAAPPAAGA
Sequences:
>Translated_370_residues MSAQPVFADPAAAAAPPASPFLIEADLDAARCLRLAGSRREVGRQHGAALREPIARFLGDRVTRLEPLVSARRLHEFAPL IASHTREIERVLPELAEEIHGLAEGADIATEDAFLLQLRRELSGFQRIPARGDCTTFGRHAGGESIVAQTIDLNGDMAGE LNVLEIAGAPGAARPAGVALLSFTGLVGYLGINDRGLAIGLNLVLGGQWRPGIPGYLAIRHLLERCASVDECLDTLQALP LASSRALTIADAARVVTVEYTPDALVVLEGAQHAHANHFLHPGLASDDALNPFARSSSLRRLEACRELLASLPAGADARA CLDGLARAPIEVPPTGDVRRECTVASVAMFPARRALHVRGRPAAPPAAGA >Mature_369_residues SAQPVFADPAAAAAPPASPFLIEADLDAARCLRLAGSRREVGRQHGAALREPIARFLGDRVTRLEPLVSARRLHEFAPLI ASHTREIERVLPELAEEIHGLAEGADIATEDAFLLQLRRELSGFQRIPARGDCTTFGRHAGGESIVAQTIDLNGDMAGEL NVLEIAGAPGAARPAGVALLSFTGLVGYLGINDRGLAIGLNLVLGGQWRPGIPGYLAIRHLLERCASVDECLDTLQALPL ASSRALTIADAARVVTVEYTPDALVVLEGAQHAHANHFLHPGLASDDALNPFARSSSLRRLEACRELLASLPAGADARAC LDGLARAPIEVPPTGDVRRECTVASVAMFPARRALHVRGRPAAPPAAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38985; Mature: 38854
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQPVFADPAAAAAPPASPFLIEADLDAARCLRLAGSRREVGRQHGAALREPIARFLGD CCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHH RVTRLEPLVSARRLHEFAPLIASHTREIERVLPELAEEIHGLAEGADIATEDAFLLQLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ELSGFQRIPARGDCTTFGRHAGGESIVAQTIDLNGDMAGELNVLEIAGAPGAARPAGVAL HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHH LSFTGLVGYLGINDRGLAIGLNLVLGGQWRPGIPGYLAIRHLLERCASVDECLDTLQALP HHHHHHHHEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LASSRALTIADAARVVTVEYTPDALVVLEGAQHAHANHFLHPGLASDDALNPFARSSSLR CCCCCEEEEECCEEEEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHH RLEACRELLASLPAGADARACLDGLARAPIEVPPTGDVRRECTVASVAMFPARRALHVRG HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECC RPAAPPAAGA CCCCCCCCCC >Mature Secondary Structure SAQPVFADPAAAAAPPASPFLIEADLDAARCLRLAGSRREVGRQHGAALREPIARFLGD CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHH RVTRLEPLVSARRLHEFAPLIASHTREIERVLPELAEEIHGLAEGADIATEDAFLLQLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ELSGFQRIPARGDCTTFGRHAGGESIVAQTIDLNGDMAGELNVLEIAGAPGAARPAGVAL HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHH LSFTGLVGYLGINDRGLAIGLNLVLGGQWRPGIPGYLAIRHLLERCASVDECLDTLQALP HHHHHHHHEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LASSRALTIADAARVVTVEYTPDALVVLEGAQHAHANHFLHPGLASDDALNPFARSSSLR CCCCCEEEEECCEEEEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHH RLEACRELLASLPAGADARACLDGLARAPIEVPPTGDVRRECTVASVAMFPARRALHVRG HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECC RPAAPPAAGA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA