| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is p20 [H]
Identifier: 238027278
GI number: 238027278
Start: 1833144
End: 1833731
Strand: Direct
Name: p20 [H]
Synonym: bglu_1g16650
Alternate gene names: 238027278
Gene position: 1833144-1833731 (Clockwise)
Preceding gene: 238027277
Following gene: 238027279
Centisome position: 46.93
GC content: 68.71
Gene sequence:
>588_bases ATGACCTGGAACATCCCCGCGATACTGAACACGACGCTCGAGAACGAGGTCGTCACGCTGCGCCGCATCGGGCTCGACGA CAAGGACGGCTTCGCGCGCATCGCCTACGACCCGCAGAGCTGGACCTACATGGTGTCGGTGGTGCACGACGAGCCGAGCC TGGTGGCGTTCCTCGAACGCGCGATCGCCGATTCGCTGGCCGGCACGCGCGTGGTGTTCGCGATCATCGACCGCAAGAGC GGCCAGTTCGCCGGCACCAGCGCGTTCGGCAATCTCGCGGCCGCCGACCGGCGCCTCGAGATCGGCTGGTCGTGGCTCGG CGCGCCGTATCGCGGCACCGCCGTGAACCGCGCGGCCAAGGGCCTGCTGCTCGACTACGCGTTCGGCGAGCTCGGCTGCG AGCGCGTCGAGTTCAAGACCGACGTGCTCAACGAGCGCGCGCGGGCCGGCCTGCGCGGCATCGGCGCGACCGAGGAAGGC GTGATGCGCAGCTTCAACTTCATGCCGAGCGGCCGGCGCCGCGACGCGGTCTATTACTCGATCCTCAAATCGGAGTGGCC CGATGTCCGCGCAACCCGTTTTCGCTGA
Upstream 100 bases:
>100_bases ACCGAATTCACCGAGGACGATCTGGCGGCGCTGCGCAGCGCGCGCGACATCGTCGGCCTGCTGTCCTCGAAAGCCGTGAC CTGATCCAGACGGAGACGAC
Downstream 100 bases:
>100_bases CCCGGCCGCGGCCGCCGCGCCGCCCGCCTCGCCGTTCCTGATCGAGGCGGATCTCGACGCCGCGCGCTGCCTGCGCCTTG CCGGCTCGCGCCGCGAGGTC
Product: putative GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTWNIPAILNTTLENEVVTLRRIGLDDKDGFARIAYDPQSWTYMVSVVHDEPSLVAFLERAIADSLAGTRVVFAIIDRKS GQFAGTSAFGNLAAADRRLEIGWSWLGAPYRGTAVNRAAKGLLLDYAFGELGCERVEFKTDVLNERARAGLRGIGATEEG VMRSFNFMPSGRRRDAVYYSILKSEWPDVRATRFR
Sequences:
>Translated_195_residues MTWNIPAILNTTLENEVVTLRRIGLDDKDGFARIAYDPQSWTYMVSVVHDEPSLVAFLERAIADSLAGTRVVFAIIDRKS GQFAGTSAFGNLAAADRRLEIGWSWLGAPYRGTAVNRAAKGLLLDYAFGELGCERVEFKTDVLNERARAGLRGIGATEEG VMRSFNFMPSGRRRDAVYYSILKSEWPDVRATRFR >Mature_194_residues TWNIPAILNTTLENEVVTLRRIGLDDKDGFARIAYDPQSWTYMVSVVHDEPSLVAFLERAIADSLAGTRVVFAIIDRKSG QFAGTSAFGNLAAADRRLEIGWSWLGAPYRGTAVNRAAKGLLLDYAFGELGCERVEFKTDVLNERARAGLRGIGATEEGV MRSFNFMPSGRRRDAVYYSILKSEWPDVRATRFR
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322233, Length=152, Percent_Identity=29.6052631578947, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 21772; Mature: 21641
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWNIPAILNTTLENEVVTLRRIGLDDKDGFARIAYDPQSWTYMVSVVHDEPSLVAFLER CCCCCCHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHH AIADSLAGTRVVFAIIDRKSGQFAGTSAFGNLAAADRRLEIGWSWLGAPYRGTAVNRAAK HHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCEEEECEEECCCCCCCCHHHHHHH GLLLDYAFGELGCERVEFKTDVLNERARAGLRGIGATEEGVMRSFNFMPSGRRRDAVYYS HHEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH ILKSEWPDVRATRFR HHHHCCCCCCCCCCC >Mature Secondary Structure TWNIPAILNTTLENEVVTLRRIGLDDKDGFARIAYDPQSWTYMVSVVHDEPSLVAFLER CCCCCHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHH AIADSLAGTRVVFAIIDRKSGQFAGTSAFGNLAAADRRLEIGWSWLGAPYRGTAVNRAAK HHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCEEEECEEECCCCCCCCHHHHHHH GLLLDYAFGELGCERVEFKTDVLNERARAGLRGIGATEEGVMRSFNFMPSGRRRDAVYYS HHEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH ILKSEWPDVRATRFR HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2838827 [H]