Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027169

Identifier: 238027169

GI number: 238027169

Start: 1708501

End: 1710096

Strand: Direct

Name: 238027169

Synonym: bglu_1g15550

Alternate gene names: NA

Gene position: 1708501-1710096 (Clockwise)

Preceding gene: 238027168

Following gene: 238027170

Centisome position: 43.73

GC content: 65.85

Gene sequence:

>1596_bases
ATGCCCATCCCGTTCCCGTTCGACTTCCGCGCACCGGACTATGTGCAGGTGTTCGAATGGCGAGCGGAGCGCCTGCAGCG
CATCCGCGCGAACCCAGGCGTGCTGCCGGCGCTGCGAGCCTTCTACCGCGACAACCCGGCCCAGTTCATCATCGACTGGG
GCATGACTTTCGATCCGCGGAACGTCGAGCGCGGGCTGCCGGCCACGATCCCGTTCCTGCTTTTCCCCAAGCAGGAGGAT
TGGATCGCCTGGTTCATGGAGCGCTGGCGCGCGCGTGAGCCCGGCATCACCGAGAAGACGCGCGACATGGGGATGTCGTG
GCTGACCGTCGGCCTCGCCGACACGATATGCCTGTTCCACGAAGGAGTTGCGGCCGGTTTCGGCTCGCGCAAGGAAGAGT
ACGTCGACAAGATCGGCTCGCCGAAGAGCCTGTTCTGGAAGGCTCGCGAGTTTCTGCGGCTGCTGCCGGCCGAATTCCGC
GGTTCGTGGGACATCGGCACGCATGCGCCGCACATGCGGATCATCTTCCCCGACACGGGGTCGGTGATCACCGGCGAGTC
GGGCGACGGCATCGGTCGCGGCGATCGCGCGAGCTTCTACGTGGTTGATGAGTCAGCGTTCCTTGAGCGCCCGCAGCTGG
TCGACGCGTCGCTGTCGGCGACGACGAACTGCCGGCAGGACATCTCGACGCCGAACGGCATGGGCAACTCGTTCGCGCAG
CGCCGGCACAGCGGCAAGATCAAGGTGTTCACCTTTCACTGGCGCGATGACCCGCGCAAGGACGACGCCTGGTACGCGAA
ACAGGTGGCCGAGTTGGATCCGGTCGTCGTTGCTCAGGAAATCGACATCAACTACGCGGCGTCCGTCGAGGGCGTCGTGA
TTCCGTCCGCCTGGGTGCAGGCGGCGCTCGGAGCGCACGTCAAGCTTGGCATCTCGCCGAGCGGCGCGCGCCGCGGCGGC
CTCGACGTTGCCGACGAGGGCAAGGACAAGAACGCGTTCGCCGGGCGTTACGGCTTCCTGCTCGAACATCTCGAATCCTG
GTCCGGTGTCGGGGGCGACATTTTCGGCACGGTCGACCGCGCGCTCGGCATCTGCGACGTGCGGGGCTATGAGGTGTTCG
ACTACGACGCCGATGGGCTCGGCGCCGGCGTGCGCGGCGACGCGCGCGTGTTGAACGAGCAGCGCGCGGCGGCCGGCAAG
CGGTCGATCCGCAGCGAGCCGTTCCGCGGCTCCGGTCCGGTGTACGACCCGGACGGGGAGATGGTGAAGGAGCGGAAGAA
CAAGGACTACTTCGCGAACCTGAAGGCGCAGTCGTGGTGGGCACTGCGCCTGCGCTTTCAGGCGACGTATCGCGCGGTGG
TGGAAGGGAAGCCATTCGATCCGGACGAGATCATCTCGATCGATCCGGATCTACCTGAGCGCGCGGCGCTGAGCATGGAA
CTGTCGCAGCCGACTTTCACCGTCAACGGCGTCGGCAAGATTGTGATCGACAAGGCGCCCGACGGAACAAAGTCACCGAA
CCTCGCGGACGCGGTGATGATTGCCTATCAGCCCGCCGCGCGCAGCATTGACATCTGGAAGAGGTTGGCAGGATGA

Upstream 100 bases:

>100_bases
CACACCGGCAGGGGCGGCGGCCCGATCACGGCCATCTCGACGCAGACGAACGATCCGATGGAGGCGGCCAAGATCTACGC
CGAGCTCATGAAGCCATAGC

Downstream 100 bases:

>100_bases
GTCGAAAGAACCGAAGCGGTGCGCGAGGCGCGCCCGCGACTCGTCCGTCGACGGCCAGCATCCGCACGTCCGATTCGTTC
GCCAATTTTCAAGCGCGGCT

Product: bacteriophage TerL protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MPIPFPFDFRAPDYVQVFEWRAERLQRIRANPGVLPALRAFYRDNPAQFIIDWGMTFDPRNVERGLPATIPFLLFPKQED
WIAWFMERWRAREPGITEKTRDMGMSWLTVGLADTICLFHEGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFR
GSWDIGTHAPHMRIIFPDTGSVITGESGDGIGRGDRASFYVVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQ
RRHSGKIKVFTFHWRDDPRKDDAWYAKQVAELDPVVVAQEIDINYAASVEGVVIPSAWVQAALGAHVKLGISPSGARRGG
LDVADEGKDKNAFAGRYGFLLEHLESWSGVGGDIFGTVDRALGICDVRGYEVFDYDADGLGAGVRGDARVLNEQRAAAGK
RSIRSEPFRGSGPVYDPDGEMVKERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPFDPDEIISIDPDLPERAALSME
LSQPTFTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAARSIDIWKRLAG

Sequences:

>Translated_531_residues
MPIPFPFDFRAPDYVQVFEWRAERLQRIRANPGVLPALRAFYRDNPAQFIIDWGMTFDPRNVERGLPATIPFLLFPKQED
WIAWFMERWRAREPGITEKTRDMGMSWLTVGLADTICLFHEGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFR
GSWDIGTHAPHMRIIFPDTGSVITGESGDGIGRGDRASFYVVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQ
RRHSGKIKVFTFHWRDDPRKDDAWYAKQVAELDPVVVAQEIDINYAASVEGVVIPSAWVQAALGAHVKLGISPSGARRGG
LDVADEGKDKNAFAGRYGFLLEHLESWSGVGGDIFGTVDRALGICDVRGYEVFDYDADGLGAGVRGDARVLNEQRAAAGK
RSIRSEPFRGSGPVYDPDGEMVKERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPFDPDEIISIDPDLPERAALSME
LSQPTFTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAARSIDIWKRLAG
>Mature_530_residues
PIPFPFDFRAPDYVQVFEWRAERLQRIRANPGVLPALRAFYRDNPAQFIIDWGMTFDPRNVERGLPATIPFLLFPKQEDW
IAWFMERWRAREPGITEKTRDMGMSWLTVGLADTICLFHEGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFRG
SWDIGTHAPHMRIIFPDTGSVITGESGDGIGRGDRASFYVVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQR
RHSGKIKVFTFHWRDDPRKDDAWYAKQVAELDPVVVAQEIDINYAASVEGVVIPSAWVQAALGAHVKLGISPSGARRGGL
DVADEGKDKNAFAGRYGFLLEHLESWSGVGGDIFGTVDRALGICDVRGYEVFDYDADGLGAGVRGDARVLNEQRAAAGKR
SIRSEPFRGSGPVYDPDGEMVKERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPFDPDEIISIDPDLPERAALSMEL
SQPTFTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAARSIDIWKRLAG

Specific function: Unknown

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 59156; Mature: 59025

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPFPFDFRAPDYVQVFEWRAERLQRIRANPGVLPALRAFYRDNPAQFIIDWGMTFDPR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCC
NVERGLPATIPFLLFPKQEDWIAWFMERWRAREPGITEKTRDMGMSWLTVGLADTICLFH
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
EGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFRGSWDIGTHAPHMRIIFPDTG
HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
SVITGESGDGIGRGDRASFYVVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQ
CEEECCCCCCCCCCCCEEEEEEECHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCHHHHH
RRHSGKIKVFTFHWRDDPRKDDAWYAKQVAELDPVVVAQEIDINYAASVEGVVIPSAWVQ
HHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEECCCCCEEECHHHHH
AALGAHVKLGISPSGARRGGLDVADEGKDKNAFAGRYGFLLEHLESWSGVGGDIFGTVDR
HHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALGICDVRGYEVFDYDADGLGAGVRGDARVLNEQRAAAGKRSIRSEPFRGSGPVYDPDGE
HCCEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
MVKERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPFDPDEIISIDPDLPERAALSME
HHHHHCCCCEEEECCCCCEEEEEEEEEEEEEHEECCCCCCCCCEEEECCCCCCHHEEEEE
LSQPTFTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAARSIDIWKRLAG
ECCCEEEECCCEEEEEECCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure 
PIPFPFDFRAPDYVQVFEWRAERLQRIRANPGVLPALRAFYRDNPAQFIIDWGMTFDPR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCC
NVERGLPATIPFLLFPKQEDWIAWFMERWRAREPGITEKTRDMGMSWLTVGLADTICLFH
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
EGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFRGSWDIGTHAPHMRIIFPDTG
HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
SVITGESGDGIGRGDRASFYVVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQ
CEEECCCCCCCCCCCCEEEEEEECHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCHHHHH
RRHSGKIKVFTFHWRDDPRKDDAWYAKQVAELDPVVVAQEIDINYAASVEGVVIPSAWVQ
HHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEECCCCCEEECHHHHH
AALGAHVKLGISPSGARRGGLDVADEGKDKNAFAGRYGFLLEHLESWSGVGGDIFGTVDR
HHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALGICDVRGYEVFDYDADGLGAGVRGDARVLNEQRAAAGKRSIRSEPFRGSGPVYDPDGE
HCCEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
MVKERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPFDPDEIISIDPDLPERAALSME
HHHHHCCCCEEEECCCCCEEEEEEEEEEEEEHEECCCCCCCCCEEEECCCCCCHHEEEEE
LSQPTFTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAARSIDIWKRLAG
ECCCEEEECCCEEEEEECCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]