Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027170

Identifier: 238027170

GI number: 238027170

Start: 1710093

End: 1711568

Strand: Direct

Name: 238027170

Synonym: bglu_1g15560

Alternate gene names: NA

Gene position: 1710093-1711568 (Clockwise)

Preceding gene: 238027169

Following gene: 238027171

Centisome position: 43.78

GC content: 64.77

Gene sequence:

>1476_bases
ATGAGTCGAAAGAACCGAAGCGGTGCGCGAGGCGCGCCCGCGACTCGTCCGTCGACGGCCAGCATCCGCACGTCCGATTC
GTTCGCCAATTTTCAAGCGCGGCTCGGCTGGGGTGCCGACAATCAGTCGTCGGCGTCGCAATACACGCTGACCTACCAGA
GCCGCAACCGGATCTGGCTCGAAGCGGCATACCGCGGTTCGTGGATCGTGCGAGCGGCCGTCGACGCGATTCCGGAAGAC
ATGACCCGCAAGGGCATCGAGATGTCCGGCCTCGAGCCGGACGACATCACGAAGCTCGAGACAGCGCTGACGCGGCTCGG
TATCTGGGATCACCTGTGCGACACCGGGAAGTGGGCGCAGCTGTACGGAGGCGCGATCGCGGTGATGCTGATCGACGGCC
AGGACATGTCGACGCCGCTGCGCGTCGAGACGATCGGGAAGGGGCAGTTCAAGGGCCTGCTCGTGCTCGACCGTTGGATG
GTGGCGCCACCGGTCGGCGAGCTCGTGACCGAACTCGGCCCGGACCTGGGCATGCCGAAGTTCTACAACGTGCTGCCTGC
GTCGGTGGCGCTGGCCGGCGAAAAGATCCACTACAGCCGCGTCATCCGTCTCGACGGCGAGGCGCTGCCGTACTACCAGC
GCATCAGCGAGAACGGCTGGGGGTTGTCGATCCTCGAGCCCATGTGGGACCGCCTGATCGCGTTCGATAGTGCAACGGTT
GGCGCGGGGCAACTCGTCTACAAGGCGCACTTGCGCGTCATTAGCGTCGAGAAGCTGCGCGAAATCCTTGCGGCGGGCGG
CGAAATTGAAGAAGGTCTTAAGAAGCAGATCGAATGGATTCGTGCCGGCCAGACCAACGAAGGCATGACGATACTGGACG
CGAGCGACAAATTCGAAACGCACCAGTACAGCTTCAGCGGCCTGTCTGACGTGATGCTGCAGTTTGCGATGCAGCTCAGC
GGCGCGACGGGCATCCCGCTCGATCGTCTGTTCGGCCAGCAGCCGGCCGGGCTGAGCGATACCGGCGAGGGCTCGCGCCA
GCTCTACCACGAGAAAGTGCATGCCAGGCAAGAGCGTAAGTTCCGGAACCCGCTGCACGTGCTGCTCGACGTGCTGTCGT
GCTCGGTGCTCGGGCGTCCGCTGCCCGACGACTTCGGCTATGAGTTCCGGCCGCTGCAGGAGATGACGGCGGCCGAGAAG
GCGGAGATCGGCAACAAGACGGTCGATTCGGTCACTAAGGCGGTCGATGCAGACCTGATCACGCGCAGCCAGGGCATGCG
CGAACTGAAGGCGTCCTCGCCGGACACTGGCATGTTCGGCGACATCTCCGATGAGGCGATCACACAGGCCGAGCAGGACG
AGCAGGCGCCCGAGCCGCCGGACATCGACACGTCGCTGCCGGGTGGCGCGGTACTGCCGCCGTCGTCGGCGCGCACTGGT
GATTCTCTAATCCGTCGCCTGTTCCGCCGCCGATGA

Upstream 100 bases:

>100_bases
AGGCGCCCGACGGAACAAAGTCACCGAACCTCGCGGACGCGGTGATGATTGCCTATCAGCCCGCCGCGCGCAGCATTGAC
ATCTGGAAGAGGTTGGCAGG

Downstream 100 bases:

>100_bases
TCCTCACCCTCGACAAGAAGCGCGGCCGGAAGAAGAACCCGGTCCGCCTGAGCGTGCCCGAGCAGCAGTACGGCACGCAG
TTGCGCAAGATCGCGCAGCA

Product: phage-associated protein, HI1409 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSRKNRSGARGAPATRPSTASIRTSDSFANFQARLGWGADNQSSASQYTLTYQSRNRIWLEAAYRGSWIVRAAVDAIPED
MTRKGIEMSGLEPDDITKLETALTRLGIWDHLCDTGKWAQLYGGAIAVMLIDGQDMSTPLRVETIGKGQFKGLLVLDRWM
VAPPVGELVTELGPDLGMPKFYNVLPASVALAGEKIHYSRVIRLDGEALPYYQRISENGWGLSILEPMWDRLIAFDSATV
GAGQLVYKAHLRVISVEKLREILAAGGEIEEGLKKQIEWIRAGQTNEGMTILDASDKFETHQYSFSGLSDVMLQFAMQLS
GATGIPLDRLFGQQPAGLSDTGEGSRQLYHEKVHARQERKFRNPLHVLLDVLSCSVLGRPLPDDFGYEFRPLQEMTAAEK
AEIGNKTVDSVTKAVDADLITRSQGMRELKASSPDTGMFGDISDEAITQAEQDEQAPEPPDIDTSLPGGAVLPPSSARTG
DSLIRRLFRRR

Sequences:

>Translated_491_residues
MSRKNRSGARGAPATRPSTASIRTSDSFANFQARLGWGADNQSSASQYTLTYQSRNRIWLEAAYRGSWIVRAAVDAIPED
MTRKGIEMSGLEPDDITKLETALTRLGIWDHLCDTGKWAQLYGGAIAVMLIDGQDMSTPLRVETIGKGQFKGLLVLDRWM
VAPPVGELVTELGPDLGMPKFYNVLPASVALAGEKIHYSRVIRLDGEALPYYQRISENGWGLSILEPMWDRLIAFDSATV
GAGQLVYKAHLRVISVEKLREILAAGGEIEEGLKKQIEWIRAGQTNEGMTILDASDKFETHQYSFSGLSDVMLQFAMQLS
GATGIPLDRLFGQQPAGLSDTGEGSRQLYHEKVHARQERKFRNPLHVLLDVLSCSVLGRPLPDDFGYEFRPLQEMTAAEK
AEIGNKTVDSVTKAVDADLITRSQGMRELKASSPDTGMFGDISDEAITQAEQDEQAPEPPDIDTSLPGGAVLPPSSARTG
DSLIRRLFRRR
>Mature_490_residues
SRKNRSGARGAPATRPSTASIRTSDSFANFQARLGWGADNQSSASQYTLTYQSRNRIWLEAAYRGSWIVRAAVDAIPEDM
TRKGIEMSGLEPDDITKLETALTRLGIWDHLCDTGKWAQLYGGAIAVMLIDGQDMSTPLRVETIGKGQFKGLLVLDRWMV
APPVGELVTELGPDLGMPKFYNVLPASVALAGEKIHYSRVIRLDGEALPYYQRISENGWGLSILEPMWDRLIAFDSATVG
AGQLVYKAHLRVISVEKLREILAAGGEIEEGLKKQIEWIRAGQTNEGMTILDASDKFETHQYSFSGLSDVMLQFAMQLSG
ATGIPLDRLFGQQPAGLSDTGEGSRQLYHEKVHARQERKFRNPLHVLLDVLSCSVLGRPLPDDFGYEFRPLQEMTAAEKA
EIGNKTVDSVTKAVDADLITRSQGMRELKASSPDTGMFGDISDEAITQAEQDEQAPEPPDIDTSLPGGAVLPPSSARTGD
SLIRRLFRRR

Specific function: Unknown

COG id: COG3567

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006445 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54029; Mature: 53898

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKNRSGARGAPATRPSTASIRTSDSFANFQARLGWGADNQSSASQYTLTYQSRNRIWL
CCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHEEECCCCCCCCCCCEEEEEEECCCEEEE
EAAYRGSWIVRAAVDAIPEDMTRKGIEMSGLEPDDITKLETALTRLGIWDHLCDTGKWAQ
EEECCCCCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
LYGGAIAVMLIDGQDMSTPLRVETIGKGQFKGLLVLDRWMVAPPVGELVTELGPDLGMPK
HCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEECHHCCCCHHHHHHHHCCCCCCCH
FYNVLPASVALAGEKIHYSRVIRLDGEALPYYQRISENGWGLSILEPMWDRLIAFDSATV
HHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
GAGQLVYKAHLRVISVEKLREILAAGGEIEEGLKKQIEWIRAGQTNEGMTILDASDKFET
CCHHHHHHHHHHEECHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
HQYSFSGLSDVMLQFAMQLSGATGIPLDRLFGQQPAGLSDTGEGSRQLYHEKVHARQERK
HHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FRNPLHVLLDVLSCSVLGRPLPDDFGYEFRPLQEMTAAEKAEIGNKTVDSVTKAVDADLI
HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TRSQGMRELKASSPDTGMFGDISDEAITQAEQDEQAPEPPDIDTSLPGGAVLPPSSARTG
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
DSLIRRLFRRR
HHHHHHHHHCC
>Mature Secondary Structure 
SRKNRSGARGAPATRPSTASIRTSDSFANFQARLGWGADNQSSASQYTLTYQSRNRIWL
CCCCCCCCCCCCCCCCCCCEEECCCCHHHHHEEECCCCCCCCCCCEEEEEEECCCEEEE
EAAYRGSWIVRAAVDAIPEDMTRKGIEMSGLEPDDITKLETALTRLGIWDHLCDTGKWAQ
EEECCCCCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
LYGGAIAVMLIDGQDMSTPLRVETIGKGQFKGLLVLDRWMVAPPVGELVTELGPDLGMPK
HCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEECHHCCCCHHHHHHHHCCCCCCCH
FYNVLPASVALAGEKIHYSRVIRLDGEALPYYQRISENGWGLSILEPMWDRLIAFDSATV
HHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
GAGQLVYKAHLRVISVEKLREILAAGGEIEEGLKKQIEWIRAGQTNEGMTILDASDKFET
CCHHHHHHHHHHEECHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
HQYSFSGLSDVMLQFAMQLSGATGIPLDRLFGQQPAGLSDTGEGSRQLYHEKVHARQERK
HHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FRNPLHVLLDVLSCSVLGRPLPDDFGYEFRPLQEMTAAEKAEIGNKTVDSVTKAVDADLI
HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TRSQGMRELKASSPDTGMFGDISDEAITQAEQDEQAPEPPDIDTSLPGGAVLPPSSARTG
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
DSLIRRLFRRR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]