| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027168
Identifier: 238027168
GI number: 238027168
Start: 1708020
End: 1708499
Strand: Direct
Name: 238027168
Synonym: bglu_1g15540
Alternate gene names: NA
Gene position: 1708020-1708499 (Clockwise)
Preceding gene: 238027167
Following gene: 238027169
Centisome position: 43.72
GC content: 67.08
Gene sequence:
>480_bases ATGGCAGCACTCCCCGACAACATCAAGGTGTTCGTCACGCAGGCGCTCGCCTGCTTCGACACGCCCACGCGCGCCGCCAA GTCGGTGCTCGAGGAGTTCGGTGTCGTCGTCTCGCCGCAGGCGTGCGAGCGCTACGACCCGACGAAGCGGGCCGGCGCGA CGCTCAGTAAAAAATACCGGGACATCTTCGAGAGCACGCGGGCGGAGTTCATCGCCGACACTTCGCGCATCGGTATCGCG CACCGCTCGGTCCGCCTGCGCAAGTTGGCGGCGGCCGTCGACAAGGCCGAGGAGCGCGGGAACCTGCCGCTGATGGCGCA GTTGCTCGAGCAGGCGGCGAAGGAGGTCGGCGACGCGTTCACGAACCGCCATCGTCTCGAACACACCGGCAGGGGCGGCG GCCCGATCACGGCCATCTCGACGCAGACGAACGATCCGATGGAGGCGGCCAAGATCTACGCCGAGCTCATGAAGCCATAG
Upstream 100 bases:
>100_bases TGAGAAGCACCAGGTTTCCGTCCGCACGATTCGCGACGTGCGAGCTCGTCGGACGTGGGCCCACATCTGACGCGCCGCGT AACCCTCCCGCATTCCCGCC
Downstream 100 bases:
>100_bases CATGCCCATCCCGTTCCCGTTCGACTTCCGCGCACCGGACTATGTGCAGGTGTTCGAATGGCGAGCGGAGCGCCTGCAGC GCATCCGCGCGAACCCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Like Protein
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MAALPDNIKVFVTQALACFDTPTRAAKSVLEEFGVVVSPQACERYDPTKRAGATLSKKYRDIFESTRAEFIADTSRIGIA HRSVRLRKLAAAVDKAEERGNLPLMAQLLEQAAKEVGDAFTNRHRLEHTGRGGGPITAISTQTNDPMEAAKIYAELMKP
Sequences:
>Translated_159_residues MAALPDNIKVFVTQALACFDTPTRAAKSVLEEFGVVVSPQACERYDPTKRAGATLSKKYRDIFESTRAEFIADTSRIGIA HRSVRLRKLAAAVDKAEERGNLPLMAQLLEQAAKEVGDAFTNRHRLEHTGRGGGPITAISTQTNDPMEAAKIYAELMKP >Mature_158_residues AALPDNIKVFVTQALACFDTPTRAAKSVLEEFGVVVSPQACERYDPTKRAGATLSKKYRDIFESTRAEFIADTSRIGIAH RSVRLRKLAAAVDKAEERGNLPLMAQLLEQAAKEVGDAFTNRHRLEHTGRGGGPITAISTQTNDPMEAAKIYAELMKP
Specific function: Unknown
COG id: COG5556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17387; Mature: 17256
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALPDNIKVFVTQALACFDTPTRAAKSVLEEFGVVVSPQACERYDPTKRAGATLSKKYR CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCHHHHHCCCHHHHHHHHHHHHH DIFESTRAEFIADTSRIGIAHRSVRLRKLAAAVDKAEERGNLPLMAQLLEQAAKEVGDAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TNRHRLEHTGRGGGPITAISTQTNDPMEAAKIYAELMKP HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AALPDNIKVFVTQALACFDTPTRAAKSVLEEFGVVVSPQACERYDPTKRAGATLSKKYR CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCHHHHHCCCHHHHHHHHHHHHH DIFESTRAEFIADTSRIGIAHRSVRLRKLAAAVDKAEERGNLPLMAQLLEQAAKEVGDAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TNRHRLEHTGRGGGPITAISTQTNDPMEAAKIYAELMKP HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA