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The map label for this gene is peh [H]

Identifier: 238027130

GI number: 238027130

Start: 1674191

End: 1675570

Strand: Direct

Name: peh [H]

Synonym: bglu_1g15100

Alternate gene names: 238027130

Gene position: 1674191-1675570 (Clockwise)

Preceding gene: 238027129

Following gene: 238027131

Centisome position: 42.86

GC content: 65.36

Gene sequence:

>1380_bases
ATGAAAGGGAAACTCAGCATGCGCGCGGCACTGGCGCTGTCCACCTTCGCCGCGCTCGCAGCACAGAGCCCGGCGCAGGC
CGGCACCTGCACGCCGCAGTGGAGCAGTTCGGCAAGCAGCAACACCAGCAACCTGCAGGCCGCCATCAAGAGCTGCTCGG
CCAGCGGCACCAGCAGCAGCCCCGGGCTGGTCGACCTGACCGCCAACAACGGCGTGTCGACGGCGGTCATCACGAGCGTG
ACGCTCGCCAGCAATATCGTGCTGAAGCTGGAGAAGGGCTTCACGCTGAAAGGCTCGCCGAACCAGTCCGCCGACAGCGC
GATGTTGACCGGCAGCGGCCTGAGCAACGTCACGATCACCGGCACCGGCGCGATCGACGGCGACGGCCAGTCCTACTGGA
CGGCCGCAGTCGGTGGCAACAACACGGCACGGCCCAAGCTGATCGCGATCGCCGGCTCGAACCTCAATATCGGCTCGAAC
TTCACCGATGCCGGAAAATCGCAGTCGATCGTCAGCTTCCCGACCTCGTCCAACGCCACCGACAATGCGCTCATCATCCG
CAACTCGCCCAAGGAGCAACTGGTCATCGAGTCGGGCTCCAAGAACGTGACGATCGACGGCGTGTGGATCTACGCCAACC
CGAAGCGCAACGCCAGCGGCGACGATCTCGCCCCCAACACCGACGCGATCGACCTGATCGGCACCCAGACCGCGACGGTG
AAGAACTGCCTGCTCGACACCGGCGACGACGATATCGCCATCAAGTCGAACTCGGGCGGCGCGGCCACCTCGAATGTCAA
CATCAGCCAATGCGTCGTGGGCGGCGGACACGGCATCTCGATCGGCGGCCAGGAAGCGGCCGGCACCACGCTCGCGCAGC
CCGGCGTGTCGCAGGTGACCGTCAGCAACGTGCAGTTCAGCGGCACGGACTACGGCTACCGCATCAAGACCGACCAGACC
TCGAAGGACAGCGGCGCGACCACCGGCGTCACCTACAAGAACACCTGCATGCGCAACGTGCAGCAGCCCTTCCTGTTCAC
TTACGCCTACGCATCCGGCACCGGCGGCGCGCTGCCGATCATCGCCAACGTCACGATCGACAACATCATCGCCACGGCCA
CCAAGCAGCAAGGCGCCATCGTCGGGCTGTCGAACGACCTGATGGGCGTGCCGAGTTCGGGCAATACCGGCATCACCATG
ACGAACACCCGGATCAGCGGCGGCAGCGCCTTCTCGGTCACGAACGGTGAACTGCAACTGGGCAGCCATAGCAGTGTGAC
GACCTCGGTCGGCACGAACGGCACGGTGAAGCCGATCACGTCCGACAGCGGCGCCACGGTGTCCTGCCCGAGCAGCATCA
CGATACCGGCGCAGCTCTGA

Upstream 100 bases:

>100_bases
CCGGCCAGCGTTTGCCGGCGCCGATGCGTCGAGATTTGCCGCCACCGGCCGGCCGAACCTGGTTTCTCCCTCGTCAATGC
CTACAAAAAGGAAAACTGTT

Downstream 100 bases:

>100_bases
GCGCCGAGGCGCGCGCCTCATGGCGTCGTGAAGCAGGCCCGCGATGCGATTGGCCGCCGGCTGCCGCCCGTATCGGCTGA
TCGTGGCGGCTGATCGCAGC

Product: glycoside hydrolase, family 28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MKGKLSMRAALALSTFAALAAQSPAQAGTCTPQWSSSASSNTSNLQAAIKSCSASGTSSSPGLVDLTANNGVSTAVITSV
TLASNIVLKLEKGFTLKGSPNQSADSAMLTGSGLSNVTITGTGAIDGDGQSYWTAAVGGNNTARPKLIAIAGSNLNIGSN
FTDAGKSQSIVSFPTSSNATDNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNASGDDLAPNTDAIDLIGTQTATV
KNCLLDTGDDDIAIKSNSGGAATSNVNISQCVVGGGHGISIGGQEAAGTTLAQPGVSQVTVSNVQFSGTDYGYRIKTDQT
SKDSGATTGVTYKNTCMRNVQQPFLFTYAYASGTGGALPIIANVTIDNIIATATKQQGAIVGLSNDLMGVPSSGNTGITM
TNTRISGGSAFSVTNGELQLGSHSSVTTSVGTNGTVKPITSDSGATVSCPSSITIPAQL

Sequences:

>Translated_459_residues
MKGKLSMRAALALSTFAALAAQSPAQAGTCTPQWSSSASSNTSNLQAAIKSCSASGTSSSPGLVDLTANNGVSTAVITSV
TLASNIVLKLEKGFTLKGSPNQSADSAMLTGSGLSNVTITGTGAIDGDGQSYWTAAVGGNNTARPKLIAIAGSNLNIGSN
FTDAGKSQSIVSFPTSSNATDNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNASGDDLAPNTDAIDLIGTQTATV
KNCLLDTGDDDIAIKSNSGGAATSNVNISQCVVGGGHGISIGGQEAAGTTLAQPGVSQVTVSNVQFSGTDYGYRIKTDQT
SKDSGATTGVTYKNTCMRNVQQPFLFTYAYASGTGGALPIIANVTIDNIIATATKQQGAIVGLSNDLMGVPSSGNTGITM
TNTRISGGSAFSVTNGELQLGSHSSVTTSVGTNGTVKPITSDSGATVSCPSSITIPAQL
>Mature_459_residues
MKGKLSMRAALALSTFAALAAQSPAQAGTCTPQWSSSASSNTSNLQAAIKSCSASGTSSSPGLVDLTANNGVSTAVITSV
TLASNIVLKLEKGFTLKGSPNQSADSAMLTGSGLSNVTITGTGAIDGDGQSYWTAAVGGNNTARPKLIAIAGSNLNIGSN
FTDAGKSQSIVSFPTSSNATDNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNASGDDLAPNTDAIDLIGTQTATV
KNCLLDTGDDDIAIKSNSGGAATSNVNISQCVVGGGHGISIGGQEAAGTTLAQPGVSQVTVSNVQFSGTDYGYRIKTDQT
SKDSGATTGVTYKNTCMRNVQQPFLFTYAYASGTGGALPIIANVTIDNIIATATKQQGAIVGLSNDLMGVPSSGNTGITM
TNTRISGGSAFSVTNGELQLGSHSSVTTSVGTNGTVKPITSDSGATVSCPSSITIPAQL

Specific function: Involved in maceration and soft-rotting of plant tissue [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 28 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000743
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.15 [H]

Molecular weight: Translated: 46060; Mature: 46060

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00147 ARGINASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKLSMRAALALSTFAALAAQSPAQAGTCTPQWSSSASSNTSNLQAAIKSCSASGTSSS
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PGLVDLTANNGVSTAVITSVTLASNIVLKLEKGFTLKGSPNQSADSAMLTGSGLSNVTIT
CCEEEEECCCCCCEEHEEEEEECCEEEEEEECCEEECCCCCCCCCCEEEECCCCCEEEEE
GTGAIDGDGQSYWTAAVGGNNTARPKLIAIAGSNLNIGSNFTDAGKSQSIVSFPTSSNAT
ECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCC
DNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNASGDDLAPNTDAIDLIGTQTATV
CCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHH
KNCLLDTGDDDIAIKSNSGGAATSNVNISQCVVGGGHGISIGGQEAAGTTLAQPGVSQVT
HHHEEECCCCCEEEECCCCCCEECCCCHHEEEEECCCEEECCCCCCCCCEECCCCCCEEE
VSNVQFSGTDYGYRIKTDQTSKDSGATTGVTYKNTCMRNVQQPFLFTYAYASGTGGALPI
EEEEEECCCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEEECCCCCCEEE
IANVTIDNIIATATKQQGAIVGLSNDLMGVPSSGNTGITMTNTRISGGSAFSVTNGELQL
EEEEEECCEEEECCCCCCEEEEECCCCEECCCCCCCCEEEEEEEECCCCEEEEECCEEEE
GSHSSVTTSVGTNGTVKPITSDSGATVSCPSSITIPAQL
CCCCCEEEECCCCCEEEEEECCCCCEEECCCCEEEECCC
>Mature Secondary Structure
MKGKLSMRAALALSTFAALAAQSPAQAGTCTPQWSSSASSNTSNLQAAIKSCSASGTSSS
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PGLVDLTANNGVSTAVITSVTLASNIVLKLEKGFTLKGSPNQSADSAMLTGSGLSNVTIT
CCEEEEECCCCCCEEHEEEEEECCEEEEEEECCEEECCCCCCCCCCEEEECCCCCEEEEE
GTGAIDGDGQSYWTAAVGGNNTARPKLIAIAGSNLNIGSNFTDAGKSQSIVSFPTSSNAT
ECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCC
DNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNASGDDLAPNTDAIDLIGTQTATV
CCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHH
KNCLLDTGDDDIAIKSNSGGAATSNVNISQCVVGGGHGISIGGQEAAGTTLAQPGVSQVT
HHHEEECCCCCEEEECCCCCCEECCCCHHEEEEECCCEEECCCCCCCCCEECCCCCCEEE
VSNVQFSGTDYGYRIKTDQTSKDSGATTGVTYKNTCMRNVQQPFLFTYAYASGTGGALPI
EEEEEECCCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEEECCCCCCEEE
IANVTIDNIIATATKQQGAIVGLSNDLMGVPSSGNTGITMTNTRISGGSAFSVTNGELQL
EEEEEECCEEEECCCCCCEEEEECCCCEECCCCCCCCEEEEEEEECCCCEEEEECCEEEE
GSHSSVTTSVGTNGTVKPITSDSGATVSCPSSITIPAQL
CCCCCEEEECCCCCEEEEEECCCCCEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2215211; 8074530; 8407675 [H]