| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is qorA [H]
Identifier: 238027129
GI number: 238027129
Start: 1671103
End: 1672041
Strand: Direct
Name: qorA [H]
Synonym: bglu_1g15090
Alternate gene names: 238027129
Gene position: 1671103-1672041 (Clockwise)
Preceding gene: 238027124
Following gene: 238027130
Centisome position: 42.78
GC content: 72.1
Gene sequence:
>939_bases ATGGATGGGATGAAAGCATGGCGGATCCACCGTTTCGGTGGCCGCGCGGCCTTGCAGTGCGACGAGGTCGAACTGCCGGT GCCCATGCCGACCGACGTGCGGGTGCGCGTGAGCGCGGCCGGCCTGAATCCGGTCGACCTGAAAACCAGCAAGGGGCACT ATCCGTTGGTGAAGGAGGACGCGCTGCCCCACACGCTTGGCCGCGATTGCGCGGGCGTGGTCGACCAGGTCGGCTCGGCC GTCACCGGCTGGCGGCCCGGCGACGAGGTGATGGGCTTTGTCGGCCAGCGCGAGGGCACCTTCGCCGGGCAGGTCTGCGT GGCCGCCGACGCGCTGGCCCGGCGTCCCGCGAAGGCGGATCTGCCGGTGGCCGGTGCGCTGCCGCTCGCCGCGCTGACGG CATGGCAGGGACTCGTCGAGCATGGCCGGCTGATGCCTGGCCAGCGCGTGCTGATTCACGCGGCGTCGGGCGGGGTCGGC CATCTGGCGGTCCAGTTCGCGCGACGTCTGGGCGCGCACGTGATCGCGACCGCGTCGGGCGACGGCGCCGCTTTCGTGCG CGGGCTCGGCGCCGACGAGGTAATCGATTATCGCCGGCAGCGTTTCGAGGACGTGGTGCACGACGTCGATCTCGTCTACG ACCTGTTGGGAGGCGAAACGCAGGCGCGCTCGTGGAAGGTGCTCCGCCAGGGCGGCACGCTGGTCTCGACCCTGACGCAG CCGAGCGAGGAGCGGGCGGCCCAGCATGGCGCCCGGGCGATCCGCTACCTCACGCGGCCGGACGGCGCCGCGCTGGCGCA GATCGGTGCCTGGCTCGACGAGGGGGAGGTCGCCATGACGCTCGTCGACAGTTTCGGCTTCGACGCGCTGCCCGAGGCGT TCGCGCGGCTCGAGGCCGGGCACCTGTACGGCAAGCTGGCGCTGAGGTGCGCCGCGTGA
Upstream 100 bases:
>100_bases TCGAGCGGCCTCGCCGGTACGTCGCTTGCGGCTGCCCTATCGGGCGCGGTGTCCCGCGTCCCGCTCGCGTGCGTGACGCG TCATTTCCGAGGAGTTCGCG
Downstream 100 bases:
>100_bases CGGGCGTTGCACGGGCCGCAGGCGGCGGTGGACATCGCAGCCGACGATGAGCCCCGAGCGTCGGGCGCGATTGGACGCAT CGAAGCGCCGCCGTCACGCT
Product: putative zinc-binding dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MDGMKAWRIHRFGGRAALQCDEVELPVPMPTDVRVRVSAAGLNPVDLKTSKGHYPLVKEDALPHTLGRDCAGVVDQVGSA VTGWRPGDEVMGFVGQREGTFAGQVCVAADALARRPAKADLPVAGALPLAALTAWQGLVEHGRLMPGQRVLIHAASGGVG HLAVQFARRLGAHVIATASGDGAAFVRGLGADEVIDYRRQRFEDVVHDVDLVYDLLGGETQARSWKVLRQGGTLVSTLTQ PSEERAAQHGARAIRYLTRPDGAALAQIGAWLDEGEVAMTLVDSFGFDALPEAFARLEAGHLYGKLALRCAA
Sequences:
>Translated_312_residues MDGMKAWRIHRFGGRAALQCDEVELPVPMPTDVRVRVSAAGLNPVDLKTSKGHYPLVKEDALPHTLGRDCAGVVDQVGSA VTGWRPGDEVMGFVGQREGTFAGQVCVAADALARRPAKADLPVAGALPLAALTAWQGLVEHGRLMPGQRVLIHAASGGVG HLAVQFARRLGAHVIATASGDGAAFVRGLGADEVIDYRRQRFEDVVHDVDLVYDLLGGETQARSWKVLRQGGTLVSTLTQ PSEERAAQHGARAIRYLTRPDGAALAQIGAWLDEGEVAMTLVDSFGFDALPEAFARLEAGHLYGKLALRCAA >Mature_312_residues MDGMKAWRIHRFGGRAALQCDEVELPVPMPTDVRVRVSAAGLNPVDLKTSKGHYPLVKEDALPHTLGRDCAGVVDQVGSA VTGWRPGDEVMGFVGQREGTFAGQVCVAADALARRPAKADLPVAGALPLAALTAWQGLVEHGRLMPGQRVLIHAASGGVG HLAVQFARRLGAHVIATASGDGAAFVRGLGADEVIDYRRQRFEDVVHDVDLVYDLLGGETQARSWKVLRQGGTLVSTLTQ PSEERAAQHGARAIRYLTRPDGAALAQIGAWLDEGEVAMTLVDSFGFDALPEAFARLEAGHLYGKLALRCAA
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI47519420, Length=352, Percent_Identity=31.5340909090909, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI194239674, Length=240, Percent_Identity=29.5833333333333, Blast_Score=114, Evalue=9e-26, Organism=Homo sapiens, GI13236495, Length=240, Percent_Identity=29.5833333333333, Blast_Score=114, Evalue=9e-26, Organism=Homo sapiens, GI194239676, Length=248, Percent_Identity=30.241935483871, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI24308257, Length=240, Percent_Identity=30, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI18379349, Length=233, Percent_Identity=34.3347639484979, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI67078404, Length=217, Percent_Identity=30.4147465437788, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI28557745, Length=204, Percent_Identity=31.8627450980392, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI22538446, Length=236, Percent_Identity=31.7796610169492, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI22538444, Length=236, Percent_Identity=31.7796610169492, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI67078406, Length=209, Percent_Identity=29.6650717703349, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1790485, Length=236, Percent_Identity=33.0508474576271, Blast_Score=105, Evalue=5e-24, Organism=Caenorhabditis elegans, GI71987554, Length=365, Percent_Identity=26.3013698630137, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17507255, Length=200, Percent_Identity=32.5, Blast_Score=84, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6319520, Length=246, Percent_Identity=27.6422764227642, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24581339, Length=364, Percent_Identity=29.9450549450549, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24581341, Length=362, Percent_Identity=29.8342541436464, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI45550423, Length=232, Percent_Identity=26.7241379310345, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 33148; Mature: 33148
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGMKAWRIHRFGGRAALQCDEVELPVPMPTDVRVRVSAAGLNPVDLKTSKGHYPLVKED CCCCCCEEEEECCCCEEEEECCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC ALPHTLGRDCAGVVDQVGSAVTGWRPGDEVMGFVGQREGTFAGQVCVAADALARRPAKAD CCCHHHCHHHHHHHHHHCCHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC LPVAGALPLAALTAWQGLVEHGRLMPGQRVLIHAASGGVGHLAVQFARRLGAHVIATASG CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECC DGAAFVRGLGADEVIDYRRQRFEDVVHDVDLVYDLLGGETQARSWKVLRQGGTLVSTLTQ CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHCC PSEERAAQHGARAIRYLTRPDGAALAQIGAWLDEGEVAMTLVDSFGFDALPEAFARLEAG CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHHHHH HLYGKLALRCAA HHHHHHHEEECC >Mature Secondary Structure MDGMKAWRIHRFGGRAALQCDEVELPVPMPTDVRVRVSAAGLNPVDLKTSKGHYPLVKED CCCCCCEEEEECCCCEEEEECCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC ALPHTLGRDCAGVVDQVGSAVTGWRPGDEVMGFVGQREGTFAGQVCVAADALARRPAKAD CCCHHHCHHHHHHHHHHCCHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC LPVAGALPLAALTAWQGLVEHGRLMPGQRVLIHAASGGVGHLAVQFARRLGAHVIATASG CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECC DGAAFVRGLGADEVIDYRRQRFEDVVHDVDLVYDLLGGETQARSWKVLRQGGTLVSTLTQ CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHCC PSEERAAQHGARAIRYLTRPDGAALAQIGAWLDEGEVAMTLVDSFGFDALPEAFARLEAG CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHHHHH HLYGKLALRCAA HHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]