| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is rcsC [C]
Identifier: 238027103
GI number: 238027103
Start: 1636590
End: 1637039
Strand: Direct
Name: rcsC [C]
Synonym: bglu_1g14830
Alternate gene names: 238027103
Gene position: 1636590-1637039 (Clockwise)
Preceding gene: 238027100
Following gene: 238027104
Centisome position: 41.89
GC content: 69.78
Gene sequence:
>450_bases ATGAACACCACTAACGCCACACGCTGTTCGTCAAGAACGTTCCGGCGCGCCGGCGATCGGGCGCTTCGGGTGCTCGTGGT CGACGATCACGCCGACGCCGCCGAGGCGACCGCCCTGTACCTGTCGGTGGTGGGACACGAGGCGCGCTACGTCACCACGG CGCTGGCCGCCGGCGACGCCGCGACGGGGCACGCGCCGGCGGTGGTCCTGCTGGACATCAACATGCCGGGCAAGAGCGGC TTCGACGTCGCGACGGAACTACGCGCGCTGGCCGCGACGCGCGACGCCATCCTGATCGCCTACACCTCCGACGAGTGGGC GGCCATACGAGAGGACGCCATGGCCAGCGGATTCGACGGCTATTTCCGCAAGGCCTCCGAACTGTCCGTCCTGCTGGACC TGATTGCGTCGTGCGCGGAAAGCGAAGCTCCGCGCGCGGGGGCGGCGTAG
Upstream 100 bases:
>100_bases GCCGCCGGTCATACTTCGGCCATCACAATACACAGTCTCGGCACGCTTTCCGTGCGGCTCGGCGGCATGATGGGACGCAT GCAACGAAGGAAGGGATGGT
Downstream 100 bases:
>100_bases ACGCTGCGCTCCGGCGCACCGCGCGCGACGCGCGCCGGTGTCCCTCATCGCGCCGAGCACGGCGCGCCGATTGCCGGCCA GCAGCAGGCCGGCAGCAGGC
Product: multi-sensor hybrid histidine kinase
Products: NA
Alternate protein names: PAS Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Response Regulator Receiver Protein; Response Regulator Receiver Domain-Containing Protein; Sensor Hybrid Histidine Kinase With PAS Domin; Two-Component Regulatory System Protein
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNTTNATRCSSRTFRRAGDRALRVLVVDDHADAAEATALYLSVVGHEARYVTTALAAGDAATGHAPAVVLLDINMPGKSG FDVATELRALAATRDAILIAYTSDEWAAIREDAMASGFDGYFRKASELSVLLDLIASCAESEAPRAGAA
Sequences:
>Translated_149_residues MNTTNATRCSSRTFRRAGDRALRVLVVDDHADAAEATALYLSVVGHEARYVTTALAAGDAATGHAPAVVLLDINMPGKSG FDVATELRALAATRDAILIAYTSDEWAAIREDAMASGFDGYFRKASELSVLLDLIASCAESEAPRAGAA >Mature_149_residues MNTTNATRCSSRTFRRAGDRALRVLVVDDHADAAEATALYLSVVGHEARYVTTALAAGDAATGHAPAVVLLDINMPGKSG FDVATELRALAATRDAILIAYTSDEWAAIREDAMASGFDGYFRKASELSVLLDLIASCAESEAPRAGAA
Specific function: Member Of The Two-Component Regulatory System rcsC/rcsB Involved In The Regulation Of The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. rcsC Probably Functions As A Membrane-Associated Protein Kinase That Phosphorylates rcsB In Response
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 15619; Mature: 15619
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTNATRCSSRTFRRAGDRALRVLVVDDHADAAEATALYLSVVGHEARYVTTALAAGDA CCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC ATGHAPAVVLLDINMPGKSGFDVATELRALAATRDAILIAYTSDEWAAIREDAMASGFDG CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCH YFRKASELSVLLDLIASCAESEAPRAGAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNTTNATRCSSRTFRRAGDRALRVLVVDDHADAAEATALYLSVVGHEARYVTTALAAGDA CCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC ATGHAPAVVLLDINMPGKSGFDVATELRALAATRDAILIAYTSDEWAAIREDAMASGFDG CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCH YFRKASELSVLLDLIASCAESEAPRAGAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA