| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yfgL [H]
Identifier: 238027074
GI number: 238027074
Start: 1598807
End: 1599952
Strand: Direct
Name: yfgL [H]
Synonym: bglu_1g14530
Alternate gene names: 238027074
Gene position: 1598807-1599952 (Clockwise)
Preceding gene: 238027073
Following gene: 238027075
Centisome position: 40.93
GC content: 67.89
Gene sequence:
>1146_bases ATGAATTTGCTGAAACGTAACGCTGCTCCGATTGCCTGCGCGGTCGCCGTCCTCGCGCTGGCGGCGTGCTCGTCCACGAA GGACGCGCGCCGCGTGCCGACGCCGCTCACCGAGATCAAGCCAGTGCTGAATGTGCAGCAGGCGTGGAAGACGAGCGTCG GCAAGGGCGGTCGCTATTTGTTCTCGCCGATCGCGGTCGGCGACGCGGTGTTCGTCGCCGCGGCGAACGGCTCGGTCGAG AAGATCGACGCGAAGACGGGCCAGACGGTGTGGCGTACGAAGCTGCACTCGGACCTGTCGGCCGGCGTCGGCAGCGACGG CAACCTGACTGCGGTCGGTGCGCTCAAGGGCGGCGTGTTCGTGCTCGGCGCGGACGGCAAGCAGCTCTGGACGACGACCG TGCAGGGCGAGATCTTCTCGCCGCCGCTGGTCGGCAACGGTCTCGTGATCGTGCGCACGATCGATGGCCAGGTGATCGCG TTCGCCGCGCAGACGGGCGAGCAGAAGTGGATCTACCGCAGCCGCGCGGTGCCGCTGAACCTGCGCGTGTCGGCCGGCAT GACGTTTGCGGGCGATGCGGCGGTGCTGGCCGGTTTCCAGGGTGGCGGCCTGGTCGCGATCAATCTTCAGACGGGTGAGC CGTACTGGCAGACGCCCGTGTCGTATCCGAAGGGCGTGACCGAAGTCGAGCGGATCAACGACGTGAGCGGGCCGCCGACG CTGGTCGGTGCGGAAACCTGCGCGGTCACGTTCCAGGGGCAGATTGGCTGTTTCGACGCGAATTCGGGCCGTCCGGTCTG GGAGAAGCCGTTCTCGAGCCGCAGCGGCATCGCGCAGGACGACACCGTGGTGACGGGCGGCGACGACTGGTCGGTGGTCA CCGCCTACGACGTCGCGAACGGCAACCAGCTCTGGCGCAACGACAAGCTCAAGAGTCGCGATGTCGGCGTGCCCTATCTG CTCGGCCACGCGGTCGTGATGGGCGACTACAAGGGTTTCGTCCACTTCCTGTCGCGTGATGACGGCTCGTTCGTCGCGCG CATGAAGACGGACGGCAGCGCGATCACGGCCGCGCCGGTGCTGGCCGGCGACACGCTCGTCGTGCAGACGCACGACGGCG AGGTGTACGGCTTCCGCCCGCGCTGA
Upstream 100 bases:
>100_bases AAGACGCGTCGGCGCGCCGGCTCGTGCAGTTCAAGCTCGACGCGCTCGGCAGCTGAGCCGCCGCGCTCGCGTTCCCCAAC CTTATTAGCTTCGCTCACCG
Downstream 100 bases:
>100_bases CCGATCGGCAGGAAGGGCGCGGCCCGGCACCGGCGGTGCGGGCCGCGCCTGCTTTTTTCATGCGGCGCTTGCCGCCGGCG CCCCCGAGCGGGCGGGTCCG
Product: PQQ enzyme repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNLLKRNAAPIACAVAVLALAACSSTKDARRVPTPLTEIKPVLNVQQAWKTSVGKGGRYLFSPIAVGDAVFVAAANGSVE KIDAKTGQTVWRTKLHSDLSAGVGSDGNLTAVGALKGGVFVLGADGKQLWTTTVQGEIFSPPLVGNGLVIVRTIDGQVIA FAAQTGEQKWIYRSRAVPLNLRVSAGMTFAGDAAVLAGFQGGGLVAINLQTGEPYWQTPVSYPKGVTEVERINDVSGPPT LVGAETCAVTFQGQIGCFDANSGRPVWEKPFSSRSGIAQDDTVVTGGDDWSVVTAYDVANGNQLWRNDKLKSRDVGVPYL LGHAVVMGDYKGFVHFLSRDDGSFVARMKTDGSAITAAPVLAGDTLVVQTHDGEVYGFRPR
Sequences:
>Translated_381_residues MNLLKRNAAPIACAVAVLALAACSSTKDARRVPTPLTEIKPVLNVQQAWKTSVGKGGRYLFSPIAVGDAVFVAAANGSVE KIDAKTGQTVWRTKLHSDLSAGVGSDGNLTAVGALKGGVFVLGADGKQLWTTTVQGEIFSPPLVGNGLVIVRTIDGQVIA FAAQTGEQKWIYRSRAVPLNLRVSAGMTFAGDAAVLAGFQGGGLVAINLQTGEPYWQTPVSYPKGVTEVERINDVSGPPT LVGAETCAVTFQGQIGCFDANSGRPVWEKPFSSRSGIAQDDTVVTGGDDWSVVTAYDVANGNQLWRNDKLKSRDVGVPYL LGHAVVMGDYKGFVHFLSRDDGSFVARMKTDGSAITAAPVLAGDTLVVQTHDGEVYGFRPR >Mature_381_residues MNLLKRNAAPIACAVAVLALAACSSTKDARRVPTPLTEIKPVLNVQQAWKTSVGKGGRYLFSPIAVGDAVFVAAANGSVE KIDAKTGQTVWRTKLHSDLSAGVGSDGNLTAVGALKGGVFVLGADGKQLWTTTVQGEIFSPPLVGNGLVIVRTIDGQVIA FAAQTGEQKWIYRSRAVPLNLRVSAGMTFAGDAAVLAGFQGGGLVAINLQTGEPYWQTPVSYPKGVTEVERINDVSGPPT LVGAETCAVTFQGQIGCFDANSGRPVWEKPFSSRSGIAQDDTVVTGGDDWSVVTAYDVANGNQLWRNDKLKSRDVGVPYL LGHAVVMGDYKGFVHFLSRDDGSFVARMKTDGSAITAAPVLAGDTLVVQTHDGEVYGFRPR
Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To R.prowazekii RP232 [H]
Homologues:
Organism=Escherichia coli, GI1788859, Length=380, Percent_Identity=30.7894736842105, Blast_Score=168, Evalue=7e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017687 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 [H]
Pfam domain/function: PF01011 PQQ [H]
EC number: NA
Molecular weight: Translated: 40081; Mature: 40081
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKRNAAPIACAVAVLALAACSSTKDARRVPTPLTEIKPVLNVQQAWKTSVGKGGRYL CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE FSPIAVGDAVFVAAANGSVEKIDAKTGQTVWRTKLHSDLSAGVGSDGNLTAVGALKGGVF EEEEECCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEE VLGADGKQLWTTTVQGEIFSPPLVGNGLVIVRTIDGQVIAFAAQTGEQKWIYRSRAVPLN EEECCCCEEEEEEECCEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCEEE LRVSAGMTFAGDAAVLAGFQGGGLVAINLQTGEPYWQTPVSYPKGVTEVERINDVSGPPT EEEECCCEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCE LVGAETCAVTFQGQIGCFDANSGRPVWEKPFSSRSGIAQDDTVVTGGDDWSVVTAYDVAN EEECCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECC GNQLWRNDKLKSRDVGVPYLLGHAVVMGDYKGFVHFLSRDDGSFVARMKTDGSAITAAPV CCEEECCCCCCCCCCCCCHHHCCEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEEEE LAGDTLVVQTHDGEVYGFRPR EECCEEEEEECCCCEEEECCC >Mature Secondary Structure MNLLKRNAAPIACAVAVLALAACSSTKDARRVPTPLTEIKPVLNVQQAWKTSVGKGGRYL CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE FSPIAVGDAVFVAAANGSVEKIDAKTGQTVWRTKLHSDLSAGVGSDGNLTAVGALKGGVF EEEEECCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEE VLGADGKQLWTTTVQGEIFSPPLVGNGLVIVRTIDGQVIAFAAQTGEQKWIYRSRAVPLN EEECCCCEEEEEEECCEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCEEE LRVSAGMTFAGDAAVLAGFQGGGLVAINLQTGEPYWQTPVSYPKGVTEVERINDVSGPPT EEEECCCEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCE LVGAETCAVTFQGQIGCFDANSGRPVWEKPFSSRSGIAQDDTVVTGGDDWSVVTAYDVAN EEECCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECC GNQLWRNDKLKSRDVGVPYLLGHAVVMGDYKGFVHFLSRDDGSFVARMKTDGSAITAAPV CCEEECCCCCCCCCCCCCHHHCCEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEEEE LAGDTLVVQTHDGEVYGFRPR EECCEEEEEECCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]