Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yfgM [C]

Identifier: 238027073

GI number: 238027073

Start: 1598133

End: 1598762

Strand: Direct

Name: yfgM [C]

Synonym: bglu_1g14520

Alternate gene names: 238027073

Gene position: 1598133-1598762 (Clockwise)

Preceding gene: 238027072

Following gene: 238027074

Centisome position: 40.91

GC content: 68.57

Gene sequence:

>630_bases
ATGAGCTATCACGACGAACAAGAATCGATTGAAAGCGTAAAAGCATGGTGGGCCCGCTGGGGCGACCTGACGACCTGGAT
CCTGACCGCCGTGCTCGTCGTGGCAGCCGCCTGGAACGGCTGGAACTATTGGCAGCGCCATCAGGCGGCCCAGGCCTCTG
GGTTGTACGAGGCCGTGCAGCAGGCCGTCAGCTCCGGCGACAAGGCGAAGATCGCGCGCGCCGCGTCCGACATGGAGGAC
AAGTACGGCCGCACCGCCTATGCGCAGATGACGGCGCTCGCGGCCGCGAAAGCGCTGTACATGGCGGGCGACACGGCCGG
CGCGAAGGCGCAGCTGCAGTGGACGATCGATCACGCGCAGGACGATGCCTACAAGCAGATCGCGAAGTTGCGCCTGGCCT
CGCTGCTGCTCGAGGAGAAGGCCTACGACGCGGGCCTCGCGCTGCTGAGCGGCACGCCGGACGACGGTTTCAAGGGCCTC
GTTGCCGACCGCCGCGGCGATCTGCTCGCCGCGCAGGGCAAGCGCGGCGACGCGCGCGCCGCCTACCAGCTCGCGCTCGA
TGCGCTGCCGAAGGAAGACGCGTCGGCGCGCCGGCTCGTGCAGTTCAAGCTCGACGCGCTCGGCAGCTGA

Upstream 100 bases:

>100_bases
TTTCTAATCAATGCGATGGTTGCATCCGCCGAAGACGGCGACGACTGATGTCGGCGCCCGGCGCTCGACAACAAGCTGGA
CAGTAAGGAATCGCTAGCCG

Downstream 100 bases:

>100_bases
GCCGCCGCGCTCGCGTTCCCCAACCTTATTAGCTTCGCTCACCGATGAATTTGCTGAAACGTAACGCTGCTCCGATTGCC
TGCGCGGTCGCCGTCCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSYHDEQESIESVKAWWARWGDLTTWILTAVLVVAAAWNGWNYWQRHQAAQASGLYEAVQQAVSSGDKAKIARAASDMED
KYGRTAYAQMTALAAAKALYMAGDTAGAKAQLQWTIDHAQDDAYKQIAKLRLASLLLEEKAYDAGLALLSGTPDDGFKGL
VADRRGDLLAAQGKRGDARAAYQLALDALPKEDASARRLVQFKLDALGS

Sequences:

>Translated_209_residues
MSYHDEQESIESVKAWWARWGDLTTWILTAVLVVAAAWNGWNYWQRHQAAQASGLYEAVQQAVSSGDKAKIARAASDMED
KYGRTAYAQMTALAAAKALYMAGDTAGAKAQLQWTIDHAQDDAYKQIAKLRLASLLLEEKAYDAGLALLSGTPDDGFKGL
VADRRGDLLAAQGKRGDARAAYQLALDALPKEDASARRLVQFKLDALGS
>Mature_208_residues
SYHDEQESIESVKAWWARWGDLTTWILTAVLVVAAAWNGWNYWQRHQAAQASGLYEAVQQAVSSGDKAKIARAASDMEDK
YGRTAYAQMTALAAAKALYMAGDTAGAKAQLQWTIDHAQDDAYKQIAKLRLASLLLEEKAYDAGLALLSGTPDDGFKGLV
ADRRGDLLAAQGKRGDARAAYQLALDALPKEDASARRLVQFKLDALGS

Specific function: Unknown

COG id: COG2976

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788860, Length=213, Percent_Identity=28.6384976525822, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018704
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF09976 DUF2133 [H]

EC number: NA

Molecular weight: Translated: 22737; Mature: 22605

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYHDEQESIESVKAWWARWGDLTTWILTAVLVVAAAWNGWNYWQRHQAAQASGLYEAVQ
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QAVSSGDKAKIARAASDMEDKYGRTAYAQMTALAAAKALYMAGDTAGAKAQLQWTIDHAQ
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
DDAYKQIAKLRLASLLLEEKAYDAGLALLSGTPDDGFKGLVADRRGDLLAAQGKRGDARA
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHCCCCCEEEECCCCCCHHH
AYQLALDALPKEDASARRLVQFKLDALGS
HHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYHDEQESIESVKAWWARWGDLTTWILTAVLVVAAAWNGWNYWQRHQAAQASGLYEAVQ
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QAVSSGDKAKIARAASDMEDKYGRTAYAQMTALAAAKALYMAGDTAGAKAQLQWTIDHAQ
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
DDAYKQIAKLRLASLLLEEKAYDAGLALLSGTPDDGFKGLVADRRGDLLAAQGKRGDARA
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHCCCCCEEEECCCCCCHHH
AYQLALDALPKEDASARRLVQFKLDALGS
HHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10655208 [H]