| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026744
Identifier: 238026744
GI number: 238026744
Start: 1211980
End: 1212423
Strand: Reverse
Name: 238026744
Synonym: bglu_1g11020
Alternate gene names: NA
Gene position: 1212423-1211980 (Counterclockwise)
Preceding gene: 238026746
Following gene: 238026740
Centisome position: 31.04
GC content: 75.0
Gene sequence:
>444_bases ATGACGACGATGACGACGATGTCCGAACCGAGCCCGACCGGCCAAGCCGGCGCACGCCCCGACGCCGACTGGATGGTCGA CGATTACGAACTCGAGCAGATGGCCGCCGACCGCGCGCGCCATCGCGCCCAGCAGGACCTGCAACAGGTGCTGGTCGCGC TCGCGCGGCGGGCGTTCGGCCCGCGCCGCGGCAGCCCGTTCGGCGAGCTGCGCGGCCCGAGCTGGGGCATGCTGCTGGCG ATCGAGGCGCGCGCGTTCGGCGACCCCGGCCTGCGCGCGCGCCACGATCCCGCCGTGCTCGCCACGCTGCCGCGGCTGGC CGGCCGCCGCGGCATCGAGGACGAACTCGATGCCGAGGCGAACCTGCGGGCCGACGACGACGACCTGCCGCTCGTGATCG GCGTGGCCGCCGCGCTGCTCGGCGCGCACGACAGCGAACTCTGA
Upstream 100 bases:
>100_bases TCGCGGCGCGCCGTCGTTGAATTTCCCGCTCGCGACCGATTGCATGCCGCAAAAAGACTGTATATATTTACAGTACCCGA TCACCCGACGAGGTCTTCCG
Downstream 100 bases:
>100_bases GCGGCCGGCGGCCCGCGCCGGGCCAAGTGCCGGTCCGCTGATCGACGGCCGTCGCCTGCCGGCGATGCCGTCCAGCCCCG GCATCGCCGGCCCATCGTGC
Product: outer membrane receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTTMTTMSEPSPTGQAGARPDADWMVDDYELEQMAADRARHRAQQDLQQVLVALARRAFGPRRGSPFGELRGPSWGMLLA IEARAFGDPGLRARHDPAVLATLPRLAGRRGIEDELDAEANLRADDDDLPLVIGVAAALLGAHDSEL
Sequences:
>Translated_147_residues MTTMTTMSEPSPTGQAGARPDADWMVDDYELEQMAADRARHRAQQDLQQVLVALARRAFGPRRGSPFGELRGPSWGMLLA IEARAFGDPGLRARHDPAVLATLPRLAGRRGIEDELDAEANLRADDDDLPLVIGVAAALLGAHDSEL >Mature_146_residues TTMTTMSEPSPTGQAGARPDADWMVDDYELEQMAADRARHRAQQDLQQVLVALARRAFGPRRGSPFGELRGPSWGMLLAI EARAFGDPGLRARHDPAVLATLPRLAGRRGIEDELDAEANLRADDDDLPLVIGVAAALLGAHDSEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15896; Mature: 15765
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMTTMSEPSPTGQAGARPDADWMVDDYELEQMAADRARHRAQQDLQQVLVALARRAFG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRRGSPFGELRGPSWGMLLAIEARAFGDPGLRARHDPAVLATLPRLAGRRGIEDELDAEA CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCC NLRADDDDLPLVIGVAAALLGAHDSEL CCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTMTTMSEPSPTGQAGARPDADWMVDDYELEQMAADRARHRAQQDLQQVLVALARRAFG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRRGSPFGELRGPSWGMLLAIEARAFGDPGLRARHDPAVLATLPRLAGRRGIEDELDAEA CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCC NLRADDDDLPLVIGVAAALLGAHDSEL CCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA