| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026746
Identifier: 238026746
GI number: 238026746
Start: 1213549
End: 1213917
Strand: Reverse
Name: 238026746
Synonym: bglu_1g11040
Alternate gene names: NA
Gene position: 1213917-1213549 (Counterclockwise)
Preceding gene: 238026747
Following gene: 238026744
Centisome position: 31.07
GC content: 69.38
Gene sequence:
>369_bases ATGAAAGAACGCGCCACCATCCTGTGCCGCCGCGCCAACAAGATCCTGCTCGTGACGCGCCCGCGCTCGCGCTGGGCCCT GCCGGGCGGCACGATCCACCCGGGCGAGTCGCCGCTCGAGGCGGCCCGGCGCGAGCTGTACGAGGAAACCCGGCTCGACG GCATCGAGCTGCGCTATGCGTTTCAGTTCGGGGGCCTGACGAAGCGCCATCACGTATTCATCGCCGACGTGCCGCGCGGC CTCAAGGCGATCGCCAGCAACGAGATCACCGACTGCCGCTGGTTCGGCCGCACCCGCTTCGCGACGCTCGCGGTCAGCGT GCCGACCCGCAAGATCATCGAGCTGGTGCAGAAGATGCCGGCGCGCTAG
Upstream 100 bases:
>100_bases CTGGACGCCGACGCGCGACGCGGCGCTCGATTCGCCACCGAACCCGGCCTCGCCGGCCCAACCCGCCGGCCTTCGCCGCC CAGACCGATCACGGATACCG
Downstream 100 bases:
>100_bases GGCCGCCGGCCGGGCGGCCGGCGCGGCTCAGCGGCCGCCGAGATCGAACGCCTGCCCCATCCGCTCGGCCTCCTCGGGCG ACTGCGGGCGCGCCAGCTCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; NUDIX Family Hydrolase; NTP Pyrophosphohydrolase; Hydrolaso; Hydrolase NUDIX Family Domain-Containing Protein; MutT/NUDIX Family Hydrolase
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKERATILCRRANKILLVTRPRSRWALPGGTIHPGESPLEAARRELYEETRLDGIELRYAFQFGGLTKRHHVFIADVPRG LKAIASNEITDCRWFGRTRFATLAVSVPTRKIIELVQKMPAR
Sequences:
>Translated_122_residues MKERATILCRRANKILLVTRPRSRWALPGGTIHPGESPLEAARRELYEETRLDGIELRYAFQFGGLTKRHHVFIADVPRG LKAIASNEITDCRWFGRTRFATLAVSVPTRKIIELVQKMPAR >Mature_122_residues MKERATILCRRANKILLVTRPRSRWALPGGTIHPGESPLEAARRELYEETRLDGIELRYAFQFGGLTKRHHVFIADVPRG LKAIASNEITDCRWFGRTRFATLAVSVPTRKIIELVQKMPAR
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13968; Mature: 13968
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERATILCRRANKILLVTRPRSRWALPGGTIHPGESPLEAARRELYEETRLDGIELRYA CCCCHHEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE FQFGGLTKRHHVFIADVPRGLKAIASNEITDCRWFGRTRFATLAVSVPTRKIIELVQKMP EEECCCCCCCEEEEEECCCHHHHHHCCCCCCCEECCCCEEEEEEEECCHHHHHHHHHHCC AR CC >Mature Secondary Structure MKERATILCRRANKILLVTRPRSRWALPGGTIHPGESPLEAARRELYEETRLDGIELRYA CCCCHHEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE FQFGGLTKRHHVFIADVPRGLKAIASNEITDCRWFGRTRFATLAVSVPTRKIIELVQKMP EEECCCCCCCEEEEEECCCHHHHHHCCCCCCCEECCCCEEEEEEEECCHHHHHHHHHHCC AR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA