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The map label for this gene is yccS [C]

Identifier: 238026679

GI number: 238026679

Start: 1117902

End: 1120214

Strand: Reverse

Name: yccS [C]

Synonym: bglu_1g10330

Alternate gene names: 238026679

Gene position: 1120214-1117902 (Counterclockwise)

Preceding gene: 238026684

Following gene: 339905962

Centisome position: 28.68

GC content: 67.4

Gene sequence:

>2313_bases
ATGCGCTATTCGATCGAAATCAGGAAGTTCCTCTACAGCCAGTATTTCTTCGGCGGGCTGCGCATCGCGGTCGGTGTCTC
GCTGCCGGCGGTGCTCTGCCTGATCGTGTTCCACGAGCGCGACCTCGGCTTCACGATCGCCACCGGCGCGCTCGGCGCCT
GCGTGGTGGACATGCCCGGCCCGCTCAAGTACAAGCACAACGAGATGCTGGCCTGCAGCGTGATCGGCTTCCTGTCGGCG
CTCGCCACGGGCCTGGCCACGCCGAACATCTTCGCGCTGTGGCTGACCATCGTGCCGCTCACCTTCGTGCTGTCGCTGAT
CGTGGTGTACGGCAACCGCTGGCCGCAGATCAGCTTCGCCACGCTGTTCATGATGGTGATGACGCTGGAGGACACCTTCA
CGCCGCTGCAGGCGCTCGTCAACGCGGCGTGGATTCTCGCGGGCGGGCTCTGGTACACCTACTGGGCGACTTTCGTGTCG
CGCTGGCAGGCGCGCCGCATCGAGCAGCAGGCGCTGGCCGACAGCTTCTTCGCGCTGGCCGGCTACCTGCTCGCGCGTGC
CGAGTTCTACGACCTCGACGCCGACCTCGACGACTGCTACCGCAACCTCGTGCTCAAGCAGGTGGCCGCCGTCGAATCGC
AGGAAACCGCGCGCGACATCGTGCTGCGCAACCTGCCGAAGCTGCGCCACGGCAAGCTCGACGCGGCGCGCACCATGATG
TTCAACCTGTTCATCAACAGCGTGGACCTGCACGAGATGTTCGTCGGCGCGCATACCGACTACTCGCTGGTGCGCAGCAC
GTTCGGCGGCTCGGACCTGCTGATCTTCTATCGCGACCTGATCCGCAAGGCGGCCGGCGACCTCGAAACCGTGGGCCTGG
CCGTGCTGGAGAACCGGGCCCCGCAGTCACGCACCAGCGTGAAGGCCGAGCTGCGCGCGATCGAGTACGAGATCGAGCTG
ATGCGCAAGAAGAATTTCCCGGCCACCAACCCGGAGGCCTACGCGGCGGTGCTCGCCACGTTCCGGCGGATCTGGAGCGC
GACGCGCCTGATCGACAAGATGCGCCGCTCGCTGACCGACACGCCCGACGGCACGCGCACCGAGATCAGGATCGACAAGA
CGCTCGCGCGCTTCCTGCAGCGCCGCCGGCTCTCGCCGATGCTGATCTTCTCGAACCTGAGCCTGCGCTCGCCGAGCTTT
CGCCACGCGCTGCGCGTGACGGTGGCGGTGGCCGTGGCGTTCTGGCTCGGCCGGCTCCTGCCGCTCACCAACGCGTACTG
GATCGTGATGACCACCATCATCATCCTGAAGCCCGGCTATTCGCTGACCAAGCAGCGCAACGCGCAGCGGATCGTCGGCA
CGCTGCTCGGCTGCGCGATCAGCATCGCGCTGATCTACACGGTGAAGTCGCCGGCACTGCTGATCGCCATCATGTTCGGC
TCGATGGTGATGAGCTACAGCCTGCTGCTGTTCAACTACGCGGCCAGCGTGGTGTTCACCTCGTCCTACGTGCTGCTGAT
GTTCCACCTGCTCGCGCCGGGCAGCATGCGCATCATCGGCGAGCGCGCGATCGACACCGTGGTGGGCTGCATGATCGCGA
TCGCGGCGAGCCGGCTGTTCCCGTACTGGGAATATCGCGCGATGGGCAAGCTGGTGGCCGAGGTGCTCGCCACCACCCGC
AAGTACTTCGAGGCCGCGTGGCGCGTGGGGCGCGGGCAGACCCAGGGCGCGCCGTCGGTGGCGGCCGTGGACGGTGCGGC
GGTGGTGCCGGCCGTGGCGGCCGCGGCCGAGGCGGCGGCCAAGGACGCGGCGAAGGGCTCGCCGCTCGAGGACGATTATC
CGTACCGGCTCGCGCGCAAGAACGTTCACATCGCATTCGCGAATCTGGGCCAGGCGTTCCAGCGCATGATGATCGAGCCG
AAGGCGCAGCAGCGCTTCGTGCCCGAACTGAACGACCTGCTGGTGCAGACGCACGTGCTGGGCGCGCAGATCACGGCGGC
CGCGCCGCTGCTGCGCAATACCAGCGAGGAGGCCGGGCCGGGCAGCTACGCGGCGCTGCAGAAGGGCCTCGCGCAGGTGC
GCGAGAATCTCGAGCAGGCCGAGGCCGGCACGCCGCCGCCCGCCGACCAGGCCGAGCTGACGAAGCAGCTCACCCGTGAG
CTCGACTCGATGGTGGTCGCGGCGGAAAAATCGGAGACGGCCGGCGCGGACATGGTGCGCGACCTGAAGGAACTCGCGCA
TCAGTGCAAGCAGATGCTCGCCTCGTCGCTGCTGATCCGCAAGGATGCGAGCCTGATCCGGCTACCGCAGTGA

Upstream 100 bases:

>100_bases
CACGAAGCAGGTCGAATATCGGGCCAAACGGGCGGACGGTCGGCGCCGTGAAATACGTTAGACTCGTCGGTCTCCGCGCC
GCCTTGCCAACCCTCCATCG

Downstream 100 bases:

>100_bases
GCCGCCGAGCGGGCGCACCGGCGAACCGCGAACGGGGCAAGAGCAACGCGGCGCACTTCAGCGGCGCACTTCAGCCGCCC
GACGTCGGGCCGCCCCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 770; Mature: 770

Protein sequence:

>770_residues
MRYSIEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHERDLGFTIATGALGACVVDMPGPLKYKHNEMLACSVIGFLSA
LATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEDTFTPLQALVNAAWILAGGLWYTYWATFVS
RWQARRIEQQALADSFFALAGYLLARAEFYDLDADLDDCYRNLVLKQVAAVESQETARDIVLRNLPKLRHGKLDAARTMM
FNLFINSVDLHEMFVGAHTDYSLVRSTFGGSDLLIFYRDLIRKAAGDLETVGLAVLENRAPQSRTSVKAELRAIEYEIEL
MRKKNFPATNPEAYAAVLATFRRIWSATRLIDKMRRSLTDTPDGTRTEIRIDKTLARFLQRRRLSPMLIFSNLSLRSPSF
RHALRVTVAVAVAFWLGRLLPLTNAYWIVMTTIIILKPGYSLTKQRNAQRIVGTLLGCAISIALIYTVKSPALLIAIMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLFPYWEYRAMGKLVAEVLATTR
KYFEAAWRVGRGQTQGAPSVAAVDGAAVVPAVAAAAEAAAKDAAKGSPLEDDYPYRLARKNVHIAFANLGQAFQRMMIEP
KAQQRFVPELNDLLVQTHVLGAQITAAAPLLRNTSEEAGPGSYAALQKGLAQVRENLEQAEAGTPPPADQAELTKQLTRE
LDSMVVAAEKSETAGADMVRDLKELAHQCKQMLASSLLIRKDASLIRLPQ

Sequences:

>Translated_770_residues
MRYSIEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHERDLGFTIATGALGACVVDMPGPLKYKHNEMLACSVIGFLSA
LATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEDTFTPLQALVNAAWILAGGLWYTYWATFVS
RWQARRIEQQALADSFFALAGYLLARAEFYDLDADLDDCYRNLVLKQVAAVESQETARDIVLRNLPKLRHGKLDAARTMM
FNLFINSVDLHEMFVGAHTDYSLVRSTFGGSDLLIFYRDLIRKAAGDLETVGLAVLENRAPQSRTSVKAELRAIEYEIEL
MRKKNFPATNPEAYAAVLATFRRIWSATRLIDKMRRSLTDTPDGTRTEIRIDKTLARFLQRRRLSPMLIFSNLSLRSPSF
RHALRVTVAVAVAFWLGRLLPLTNAYWIVMTTIIILKPGYSLTKQRNAQRIVGTLLGCAISIALIYTVKSPALLIAIMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLFPYWEYRAMGKLVAEVLATTR
KYFEAAWRVGRGQTQGAPSVAAVDGAAVVPAVAAAAEAAAKDAAKGSPLEDDYPYRLARKNVHIAFANLGQAFQRMMIEP
KAQQRFVPELNDLLVQTHVLGAQITAAAPLLRNTSEEAGPGSYAALQKGLAQVRENLEQAEAGTPPPADQAELTKQLTRE
LDSMVVAAEKSETAGADMVRDLKELAHQCKQMLASSLLIRKDASLIRLPQ
>Mature_770_residues
MRYSIEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHERDLGFTIATGALGACVVDMPGPLKYKHNEMLACSVIGFLSA
LATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEDTFTPLQALVNAAWILAGGLWYTYWATFVS
RWQARRIEQQALADSFFALAGYLLARAEFYDLDADLDDCYRNLVLKQVAAVESQETARDIVLRNLPKLRHGKLDAARTMM
FNLFINSVDLHEMFVGAHTDYSLVRSTFGGSDLLIFYRDLIRKAAGDLETVGLAVLENRAPQSRTSVKAELRAIEYEIEL
MRKKNFPATNPEAYAAVLATFRRIWSATRLIDKMRRSLTDTPDGTRTEIRIDKTLARFLQRRRLSPMLIFSNLSLRSPSF
RHALRVTVAVAVAFWLGRLLPLTNAYWIVMTTIIILKPGYSLTKQRNAQRIVGTLLGCAISIALIYTVKSPALLIAIMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLFPYWEYRAMGKLVAEVLATTR
KYFEAAWRVGRGQTQGAPSVAAVDGAAVVPAVAAAAEAAAKDAAKGSPLEDDYPYRLARKNVHIAFANLGQAFQRMMIEP
KAQQRFVPELNDLLVQTHVLGAQITAAAPLLRNTSEEAGPGSYAALQKGLAQVRENLEQAEAGTPPPADQAELTKQLTRE
LDSMVVAAEKSETAGADMVRDLKELAHQCKQMLASSLLIRKDASLIRLPQ

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=684, Percent_Identity=22.8070175438596, Blast_Score=126, Evalue=5e-30,
Organism=Escherichia coli, GI87082248, Length=211, Percent_Identity=33.6492890995261, Blast_Score=83, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85300; Mature: 85300

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSIEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHERDLGFTIATGALGACVVDMPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGFLSALATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMVMTLEDTFTPLQALVNAAWILAGGLWYTYWATFVSRWQARRIEQQALADSFFALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLLARAEFYDLDADLDDCYRNLVLKQVAAVESQETARDIVLRNLPKLRHGKLDAARTMM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHH
FNLFINSVDLHEMFVGAHTDYSLVRSTFGGSDLLIFYRDLIRKAAGDLETVGLAVLENRA
HHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PQSRTSVKAELRAIEYEIELMRKKNFPATNPEAYAAVLATFRRIWSATRLIDKMRRSLTD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPDGTRTEIRIDKTLARFLQRRRLSPMLIFSNLSLRSPSFRHALRVTVAVAVAFWLGRLL
CCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTTIIILKPGYSLTKQRNAQRIVGTLLGCAISIALIYTVKSPALLIAIMFG
HHCCHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
PYWEYRAMGKLVAEVLATTRKYFEAAWRVGRGQTQGAPSVAAVDGAAVVPAVAAAAEAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH
KDAAKGSPLEDDYPYRLARKNVHIAFANLGQAFQRMMIEPKAQQRFVPELNDLLVQTHVL
HHCCCCCCCCCCCCHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH
GAQITAAAPLLRNTSEEAGPGSYAALQKGLAQVRENLEQAEAGTPPPADQAELTKQLTRE
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LDSMVVAAEKSETAGADMVRDLKELAHQCKQMLASSLLIRKDASLIRLPQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRYSIEIRKFLYSQYFFGGLRIAVGVSLPAVLCLIVFHERDLGFTIATGALGACVVDMPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGFLSALATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMVMTLEDTFTPLQALVNAAWILAGGLWYTYWATFVSRWQARRIEQQALADSFFALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLLARAEFYDLDADLDDCYRNLVLKQVAAVESQETARDIVLRNLPKLRHGKLDAARTMM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHH
FNLFINSVDLHEMFVGAHTDYSLVRSTFGGSDLLIFYRDLIRKAAGDLETVGLAVLENRA
HHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PQSRTSVKAELRAIEYEIELMRKKNFPATNPEAYAAVLATFRRIWSATRLIDKMRRSLTD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPDGTRTEIRIDKTLARFLQRRRLSPMLIFSNLSLRSPSFRHALRVTVAVAVAFWLGRLL
CCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTTIIILKPGYSLTKQRNAQRIVGTLLGCAISIALIYTVKSPALLIAIMFG
HHCCHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
PYWEYRAMGKLVAEVLATTRKYFEAAWRVGRGQTQGAPSVAAVDGAAVVPAVAAAAEAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH
KDAAKGSPLEDDYPYRLARKNVHIAFANLGQAFQRMMIEPKAQQRFVPELNDLLVQTHVL
HHCCCCCCCCCCCCHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH
GAQITAAAPLLRNTSEEAGPGSYAALQKGLAQVRENLEQAEAGTPPPADQAELTKQLTRE
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LDSMVVAAEKSETAGADMVRDLKELAHQCKQMLASSLLIRKDASLIRLPQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]