Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yjgA [C]

Identifier: 238026570

GI number: 238026570

Start: 990430

End: 991041

Strand: Reverse

Name: yjgA [C]

Synonym: bglu_1g09140

Alternate gene names: 238026570

Gene position: 991041-990430 (Counterclockwise)

Preceding gene: 238026572

Following gene: 238026569

Centisome position: 25.37

GC content: 68.79

Gene sequence:

>612_bases
ATGAACCGCAAAACCCGTATCCAACCGATCGAGCCCGCCGACGACGACAGCGGCCACGGCTACGACCGCCCCAGCAAGTC
GCAACTGAAACGCGAGATGCATGCGCTGCAGCAGCTTGGCCGCGACCTGGTCGAGCTGCCGAAGGACGCGCTCAAGCGCA
TGCCGATGCCGGAGAGCCTCGGCGACGCCGTGCGCGAGGCGCGCCGCATCACCGACCACGAAGGCAAGCGCCGCCAGCTG
CAGTACATCGGCAAGGTGATGCGCGTGCTGACCGAGCCCGAGATCGAGGCGCTCAAGTCCGCGCTCGACGCCCAGCGCGG
CGTGAACAAGGCCGAAACCGCGCGGCTGCACTGGATCGAGCGCACGCGCGACCAGCTGCTCGCCGCCGACGAGGCGCTGA
CCGCCTTCATCCGCGACTATCCGGCCGCCGACGTGCAGGAAGGCCGCACGCTGATCCGCAACGCGCGCAAGGAAGCCGAG
CAGGGCAAGCCGCCGCGCTACTTCCGCGAGCTGTTCCAGTGGATCAAGACCGCGAGCGGCACGCCGGGCGAGGCCGACGG
CGAGCGCGACGAGGATCACGACGAGGATCACGACCATGACGACGAAGCGTAA

Upstream 100 bases:

>100_bases
GCGTATCCCGCGATCATAACAAGGTCCGGCCGCCGCCACCTACCCATGCCGCCCCCTCCGCGCGACCGGCGGCGGCTCGC
GGCGCGATACAATCTCGCCC

Downstream 100 bases:

>100_bases
GCACCCCGACGAACTGATCGTCGGCCTCGTGTCGATCAGCGACCGCGCGAGCCGCGGCGACTACCAGGACCAGGGCATCC
CGGCGCTCGAAGGCTGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESLGDAVREARRITDHEGKRRQL
QYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIERTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAE
QGKPPRYFRELFQWIKTASGTPGEADGERDEDHDEDHDHDDEA

Sequences:

>Translated_203_residues
MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESLGDAVREARRITDHEGKRRQL
QYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIERTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAE
QGKPPRYFRELFQWIKTASGTPGEADGERDEDHDEDHDHDDEA
>Mature_203_residues
MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESLGDAVREARRITDHEGKRRQL
QYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIERTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAE
QGKPPRYFRELFQWIKTASGTPGEADGERDEDHDEDHDHDDEA

Specific function: Unknown

COG id: COG3028

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0307 family [H]

Homologues:

Organism=Escherichia coli, GI1790681, Length=160, Percent_Identity=38.75, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023153
- InterPro:   IPR006839 [H]

Pfam domain/function: PF04751 DUF615 [H]

EC number: NA

Molecular weight: Translated: 23326; Mature: 23326

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GDAVREARRITDHEGKRRQLQYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAEQGKPPRYFRELFQWIKTASG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
TPGEADGERDEDHDEDHDHDDEA
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GDAVREARRITDHEGKRRQLQYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAEQGKPPRYFRELFQWIKTASG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
TPGEADGERDEDHDEDHDHDDEA
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA