| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is fbp [H]
Identifier: 238026497
GI number: 238026497
Start: 906046
End: 907065
Strand: Reverse
Name: fbp [H]
Synonym: bglu_1g08410
Alternate gene names: 238026497
Gene position: 907065-906046 (Counterclockwise)
Preceding gene: 238026498
Following gene: 238026496
Centisome position: 23.22
GC content: 65.69
Gene sequence:
>1020_bases ATGTCCCTTTCCCGACGTACCACGCTGTCGAAGTATCTGATCGAGCAGCAACGCGAGAACCACAACCTTCCCGCCGACCT GCGCCTGCTGATCGAAGTCGTCGCGCGCGCCTGCAAGGCGATCAGCTTCCACGTCTCGAAGGGCGCGCTCGGCGACGCGC TCGGCACGGCCGGCAGCGAGAACGTGCAAGGCGAGGTGCAGAAAAAGCTCGACATCCTGTCGAACGAAATCCTGCTCGAC GCGAACGAATGGGGCGGCAATCTCGCCGCCATGGCTTCGGAGGAAATGGAAACGTTCTTCCCGATTCCCGAGAATTACCC GCGCGGCGAATACCTGCTGGTGTTCGATCCGCTCGACGGCTCCTCGAACATCGACGTGAACGTCTCGATCGGCACGATCT TCTCGGTGCTGCGCTGCCCGCACGGCCAGCAGGCCACCGAGCAGTCGTTCCTGCAGCCCGGCGTCAAGCAGGTGGCAGCC GGCTATGCCGTCTACGGCCCGCAGACGGTGCTGGTGCTGACCACCGGCCACGGCGTGAACTGCTTCACGCTCGACCGCGA GCTCGGCTCGTGGGTGCTGACGCAGAGCAACATGCGGATTCCGGCCGACACGCGCGAATACGCGATCAACGCCTCGAACG CACGCCACTGGCATGAACCGGTCAGGCGCTATATCGACGAGCTGAACGCCGGCGCCGACGGCCCGCGCGGCGAGAACTTC AACATGCGCTGGATCGCCTCGATGGTGGCCGACGTCCACCGCATCCTGAACCGCGGCGGCGTATTCATGTATCCGGCCGA CGCCCGCACGCCCGACCGCCCCGGCAAGCTGCGCCTGATGTATGAAGCCAACCCGATGTCCTTCATCGTGGAGCAGGCGG GCGGGGCCGCGTCGACCGGCACCGAGCGCATCCTCGAGGTGCAGCCGACCGGCCTGCATCAGCGCGTGCCGGTGATCCTC GGCTCGAAGCACGAGGTCGAACGCGTGGTCCGCTACCACCAGGAAGCAGCCGCCAGATAA
Upstream 100 bases:
>100_bases CGCCCGTGGCCGTGATACGGAACAAAAAGGCGGCGGTGCGTCAGGGCGGCGCGGGTAAAATTGCGAAAAACAGCTATTTT CCCGCCTCTCGGAGCTCAGC
Downstream 100 bases:
>100_bases GGCCCGCGCGGCGCCGTTGCGGCGGCGCCGCAAAAAAGCCCGCACGGCGCGGCGGATGTGCTTCCTCCCCTGCGTTTTTC ATCGTAGAATTCGGGCCGTT
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSLSRRTTLSKYLIEQQRENHNLPADLRLLIEVVARACKAISFHVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLD ANEWGGNLAAMASEEMETFFPIPENYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPHGQQATEQSFLQPGVKQVAA GYAVYGPQTVLVLTTGHGVNCFTLDRELGSWVLTQSNMRIPADTREYAINASNARHWHEPVRRYIDELNAGADGPRGENF NMRWIASMVADVHRILNRGGVFMYPADARTPDRPGKLRLMYEANPMSFIVEQAGGAASTGTERILEVQPTGLHQRVPVIL GSKHEVERVVRYHQEAAAR
Sequences:
>Translated_339_residues MSLSRRTTLSKYLIEQQRENHNLPADLRLLIEVVARACKAISFHVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLD ANEWGGNLAAMASEEMETFFPIPENYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPHGQQATEQSFLQPGVKQVAA GYAVYGPQTVLVLTTGHGVNCFTLDRELGSWVLTQSNMRIPADTREYAINASNARHWHEPVRRYIDELNAGADGPRGENF NMRWIASMVADVHRILNRGGVFMYPADARTPDRPGKLRLMYEANPMSFIVEQAGGAASTGTERILEVQPTGLHQRVPVIL GSKHEVERVVRYHQEAAAR >Mature_338_residues SLSRRTTLSKYLIEQQRENHNLPADLRLLIEVVARACKAISFHVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLDA NEWGGNLAAMASEEMETFFPIPENYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPHGQQATEQSFLQPGVKQVAAG YAVYGPQTVLVLTTGHGVNCFTLDRELGSWVLTQSNMRIPADTREYAINASNARHWHEPVRRYIDELNAGADGPRGENFN MRWIASMVADVHRILNRGGVFMYPADARTPDRPGKLRLMYEANPMSFIVEQAGGAASTGTERILEVQPTGLHQRVPVILG SKHEVERVVRYHQEAAAR
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI189083692, Length=332, Percent_Identity=41.566265060241, Blast_Score=255, Evalue=3e-68, Organism=Homo sapiens, GI16579888, Length=332, Percent_Identity=41.566265060241, Blast_Score=255, Evalue=3e-68, Organism=Homo sapiens, GI22907028, Length=331, Percent_Identity=41.3897280966767, Blast_Score=251, Evalue=6e-67, Organism=Escherichia coli, GI1790679, Length=330, Percent_Identity=46.6666666666667, Blast_Score=285, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17508131, Length=325, Percent_Identity=44.3076923076923, Blast_Score=280, Evalue=8e-76, Organism=Saccharomyces cerevisiae, GI6323409, Length=326, Percent_Identity=40.4907975460123, Blast_Score=255, Evalue=6e-69, Organism=Drosophila melanogaster, GI45550998, Length=329, Percent_Identity=43.161094224924, Blast_Score=258, Evalue=5e-69, Organism=Drosophila melanogaster, GI19921562, Length=329, Percent_Identity=43.161094224924, Blast_Score=258, Evalue=5e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 37464; Mature: 37333
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRRTTLSKYLIEQQRENHNLPADLRLLIEVVARACKAISFHVSKGALGDALGTAGSE CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCC NVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPENYPRGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEECCCCCCCEEHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPHGQQATEQSFLQPGVKQVAAGYAVYGPQTVLVLTTGHGVN CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCE CFTLDRELGSWVLTQSNMRIPADTREYAINASNARHWHEPVRRYIDELNAGADGPRGENF EEEECCCCCCEEEECCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC NMRWIASMVADVHRILNRGGVFMYPADARTPDRPGKLRLMYEANPMSFIVEQAGGAASTG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCC TERILEVQPTGLHQRVPVILGSKHEVERVVRYHQEAAAR CCEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLSRRTTLSKYLIEQQRENHNLPADLRLLIEVVARACKAISFHVSKGALGDALGTAGSE CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCC NVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPENYPRGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEECCCCCCCEEHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPHGQQATEQSFLQPGVKQVAAGYAVYGPQTVLVLTTGHGVN CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCE CFTLDRELGSWVLTQSNMRIPADTREYAINASNARHWHEPVRRYIDELNAGADGPRGENF EEEECCCCCCEEEECCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC NMRWIASMVADVHRILNRGGVFMYPADARTPDRPGKLRLMYEANPMSFIVEQAGGAASTG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCC TERILEVQPTGLHQRVPVILGSKHEVERVVRYHQEAAAR CCEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA