| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is ymgE [C]
Identifier: 238026496
GI number: 238026496
Start: 905178
End: 905429
Strand: Reverse
Name: ymgE [C]
Synonym: bglu_1g08400
Alternate gene names: 238026496
Gene position: 905429-905178 (Counterclockwise)
Preceding gene: 238026497
Following gene: 238026495
Centisome position: 23.18
GC content: 65.87
Gene sequence:
>252_bases ATGGCTCATGGCTTGATTATGTGGCTCATCATCGGCGCCATCGCCGGCTGGCTGGCTGGCCTGCTCGTGAAGGGCGGGGG CTTCGGCCTGGTCGTCGACATCATCGTCGGCATCGTCGGCGCCATCATCGGCGGCTGGCTCGCAGGCGTGCTCGGCATCT CGATCGGCAGCGGCTTCTTCGCGTCGATCATCGTCGCCGTGATCGGCGCGGTCATCCTGCTGTTCATCATCCGGCTGTTC CGGCGCGCCTAG
Upstream 100 bases:
>100_bases GCGTGGAGCATCCGGCCCGGGCGGCAGTTCGCGCTGCCGATTCGCATCGCGATGCCCGCGGCCGGTTCGTTGCGTAGCAT CCCAACCTGGAGGAACCATC
Downstream 100 bases:
>100_bases CCGCCCGCCCACCGCAGCCCGGCGCGCGCCCGAACGGCGCGCCGGGCCGCCTGCCCGCCTAGGCACCATCTCTGGCCGCC TCGCCCCGCCTCGCGCTCCC
Product: transglycosylase-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLVVDIIVGIVGAIIGGWLAGVLGISIGSGFFASIIVAVIGAVILLFIIRLF RRA
Sequences:
>Translated_83_residues MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLVVDIIVGIVGAIIGGWLAGVLGISIGSGFFASIIVAVIGAVILLFIIRLF RRA >Mature_82_residues AHGLIMWLIIGAIAGWLAGLLVKGGGFGLVVDIIVGIVGAIIGGWLAGVLGISIGSGFFASIIVAVIGAVILLFIIRLFR RA
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8427; Mature: 8295
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLVVDIIVGIVGAIIGGWLAGVLGISIGSGFF CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ASIIVAVIGAVILLFIIRLFRRA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHGLIMWLIIGAIAGWLAGLLVKGGGFGLVVDIIVGIVGAIIGGWLAGVLGISIGSGFF CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ASIIVAVIGAVILLFIIRLFRRA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA