| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is glk [H]
Identifier: 238026460
GI number: 238026460
Start: 865274
End: 867190
Strand: Reverse
Name: glk [H]
Synonym: bglu_1g08040
Alternate gene names: 238026460
Gene position: 867190-865274 (Counterclockwise)
Preceding gene: 238026461
Following gene: 238026458
Centisome position: 22.2
GC content: 69.8
Gene sequence:
>1917_bases ATGTCTACTGGTGCGCAAACTAAACCGGCAGCGGGCCAGCACGCCGACGGCCCGCGCCTGCTGGCCGACATCGGCGGCAC CAACGCGCGCTTCGCGCTCGAGGTCGGCCCCGGCGAGATCACGCAGATCCGCGTCTACCCCGGCGCCGACTACCCGACGC TGACCGACGCGATCCGCAAGTATCTGAAGGACGCCAAGATCGGCCGCGTCAACCACGCGGCGATCGCGATCGCGAACCCG GTCGACGGCGACCAGGTGCGCATGACCAACCACGACTGGAGCTTCTCGATCGAGGCCACGCGCCGCGCGCTGGGCTTCGA CACGCTGCTCGTGGTCAACGATTTCACCGCGCTCGCAATGGCGCTGCCCGGCCTGACCGACGCGCAGCGCCAGCAGGTGG GCGGCGGCACGCGCCGCCAGAACAGCGTGATCGGCCTGATGGGGCCGGGCACCGGGCTCGGCGTGTCGGGCCTGATCCCG GCCGACGACCGCTGGATCGCGCTCGGCAGCGAAGGCGGCCATGCCAGCTTCGCGCCGATGGACGAGCGCGAGGACCTGGT CATGCAGTACGCGCGCAAGAAGTTTGCGCACGTCTCGTTCGAGCGCGTTTGCGCGGGGCCCGGCATCGAGCTCGTCTACC GGGCACTGGCCGGGCGCGACAAGAAGCGCGTGCCGTCGGGCTTCGGCACGCCCGAGGTGGTCGAGCGGGCCCATGCGGGC GATGCGCTCGCGCTCGAGGCGGTGGACGTGTTCTGCGCGATCCTCGGCACCTTCGCGGGCAACCTCGCCGTCACGCTCGG CTCGCTCGGCGGCGTCTACATCGGCGGCGGCGTGGTGCTGAAGCTCGGCGAGCTGTTCCTGAAGTCGCGCTTTCGCGAGC GCTTCGAGCAGAAAGGGCGCTTTTCCGAGTACCTCGCGAACGTGCCGACCTACCTGATCACCGCCGACTATCCGGCATTC CTCGGCGTCTCGGCGATCCTCGCCGAGCAGTTGTCGAACCGCACGGGCGGCGCCTCGTCGGCCGTGTTCGAGCGGATCCG CCAGATGCGCGACGCGCTCACGCCGGCCGAGCGCCGCGTGGCCGACCTCGCGCTGAACCATCCGCGCTCGATCATCAACG ATCCGATCGTCGACATCGCGCGCAAGGCCGACGTGAGCCAGCCCACCGTGATCCGCTTCTGCCGCTCGCTCGGCTGCCAG GGGCTGTCCGACTTCAAGCTCAAGCTCGCCACCGGCCTGACCGGCACCATCCCGATGAGCCACAGCCAGGTCCATCTCGG CGACACGGCCACCGACTTCGGCGCGAAGGTGCTCGACAACACGGTCTCGGCGATCCTGCAGCTGCGCGAGCACCTGAACT TCGAGCACGTCGCGCAGGCCATCGAGATCCTGAACGGCGCGCGGCGCATCGAGTTCTACGGGCTCGGCAACTCGAACATC GTCGCGCAGGACGCGCATTACAAGTTCTTCCGCTTCGGGATTCCGACCATCGCCTACGGCGACCTCTACATGCAGGCCGC CTCGGCCGCGCTGCTCGGCAAGGGCGACGTGATCGTGGCCGTCTCGAAGTCGGGCCGCGCGCCCGAGCTGCTGCGCGTGC TCGAAGTGGCGATGCAGGCCGGCGCCAAGGTGATCGCGATCACCTCCAGCAACACGCCGCTCGCCAAGCGCGCGACGGTG GCGCTGGAGACCGACCACATCGAGATGCGCGAGTCGCAGCTGTCGATGATCTCGCGGATCCTGCACCTCGTGATGATCGA CATCCTGGCGGTGGGCGTCGCGATCCGGCGCGCCGCGCCGAACGCCGAGATCACCGAGGCGGTCGCGCAGGCGCGCTCGC GTGCCGGCGACGACGAATCGGCCGACGTGCTCGACTGGCTCAGCCACGGCGCGGCGCCCGCGGCCGCGCGCGAATGA
Upstream 100 bases:
>100_bases ATCGCCGGCGCCCGCAAGCGCGAGGTGCTGGAGGCCGCCGCCGCGGCGCCGCAGCGCAACGCGATTTCCCAACTGGCCAA CGACAAGGGGACCAAGCTCG
Downstream 100 bases:
>100_bases AGCGGCGCGCGCCGCCGCCGGGTCGCTGAAGCGGCGCCGGGCCGGCACCGCGCGGGTCGATCCCAAGCCAAGACAAGCCC GGGCCGGCGCTTTCGGGGCG
Product: bifunctional glucokinase/RpiR family transcriptional regulator
Products: NA
Alternate protein names: Glucokinase; Glucose kinase; Putative HTH-type transcriptional regulator [H]
Number of amino acids: Translated: 638; Mature: 637
Protein sequence:
>638_residues MSTGAQTKPAAGQHADGPRLLADIGGTNARFALEVGPGEITQIRVYPGADYPTLTDAIRKYLKDAKIGRVNHAAIAIANP VDGDQVRMTNHDWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRQQVGGGTRRQNSVIGLMGPGTGLGVSGLIP ADDRWIALGSEGGHASFAPMDEREDLVMQYARKKFAHVSFERVCAGPGIELVYRALAGRDKKRVPSGFGTPEVVERAHAG DALALEAVDVFCAILGTFAGNLAVTLGSLGGVYIGGGVVLKLGELFLKSRFRERFEQKGRFSEYLANVPTYLITADYPAF LGVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQ GLSDFKLKLATGLTGTIPMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVAQAIEILNGARRIEFYGLGNSNI VAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLEVAMQAGAKVIAITSSNTPLAKRATV ALETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAAPNAEITEAVAQARSRAGDDESADVLDWLSHGAAPAAARE
Sequences:
>Translated_638_residues MSTGAQTKPAAGQHADGPRLLADIGGTNARFALEVGPGEITQIRVYPGADYPTLTDAIRKYLKDAKIGRVNHAAIAIANP VDGDQVRMTNHDWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRQQVGGGTRRQNSVIGLMGPGTGLGVSGLIP ADDRWIALGSEGGHASFAPMDEREDLVMQYARKKFAHVSFERVCAGPGIELVYRALAGRDKKRVPSGFGTPEVVERAHAG DALALEAVDVFCAILGTFAGNLAVTLGSLGGVYIGGGVVLKLGELFLKSRFRERFEQKGRFSEYLANVPTYLITADYPAF LGVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQ GLSDFKLKLATGLTGTIPMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVAQAIEILNGARRIEFYGLGNSNI VAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLEVAMQAGAKVIAITSSNTPLAKRATV ALETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAAPNAEITEAVAQARSRAGDDESADVLDWLSHGAAPAAARE >Mature_637_residues STGAQTKPAAGQHADGPRLLADIGGTNARFALEVGPGEITQIRVYPGADYPTLTDAIRKYLKDAKIGRVNHAAIAIANPV DGDQVRMTNHDWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRQQVGGGTRRQNSVIGLMGPGTGLGVSGLIPA DDRWIALGSEGGHASFAPMDEREDLVMQYARKKFAHVSFERVCAGPGIELVYRALAGRDKKRVPSGFGTPEVVERAHAGD ALALEAVDVFCAILGTFAGNLAVTLGSLGGVYIGGGVVLKLGELFLKSRFRERFEQKGRFSEYLANVPTYLITADYPAFL GVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQG LSDFKLKLATGLTGTIPMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVAQAIEILNGARRIEFYGLGNSNIV AQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLEVAMQAGAKVIAITSSNTPLAKRATVA LETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAAPNAEITEAVAQARSRAGDDESADVLDWLSHGAAPAAARE
Specific function: Not Highly Important In E.Coli As Glucose Is Transported Into The Cell By The Pts System Already As Glucose 6-Phosphate. [C]
COG id: COG0837
COG function: function code G; Glucokinase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788732, Length=316, Percent_Identity=45.253164556962, Blast_Score=278, Evalue=6e-76, Organism=Escherichia coli, GI1788159, Length=275, Percent_Identity=35.6363636363636, Blast_Score=186, Evalue=4e-48, Organism=Escherichia coli, GI87082369, Length=268, Percent_Identity=28.7313432835821, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1788767, Length=249, Percent_Identity=27.3092369477912, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082130, Length=226, Percent_Identity=28.3185840707965, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003836 - InterPro: IPR000843 - InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF02685 Glucokinase; PF01418 HTH_6; PF01380 SIS [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 68193; Mature: 68062
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: PS00356 HTH_LACI_1 ; PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGAQTKPAAGQHADGPRLLADIGGTNARFALEVGPGEITQIRVYPGADYPTLTDAIRK CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHH YLKDAKIGRVNHAAIAIANPVDGDQVRMTNHDWSFSIEATRRALGFDTLLVVNDFTALAM HHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEHHHHHHHHCCCEEEEHHHHHHHHH ALPGLTDAQRQQVGGGTRRQNSVIGLMGPGTGLGVSGLIPADDRWIALGSEGGHASFAPM HCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC DEREDLVMQYARKKFAHVSFERVCAGPGIELVYRALAGRDKKRVPSGFGTPEVVERAHAG CCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHCCC DALALEAVDVFCAILGTFAGNLAVTLGSLGGVYIGGGVVLKLGELFLKSRFRERFEQKGR CHHHHHHHHHHHHHHHHHHCHHEEEHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC FSEYLANVPTYLITADYPAFLGVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERRV HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHH ADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQGLSDFKLKLATGLTGTIPMS HHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC HSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVAQAIEILNGARRIEFYGLGNSNI CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCE VAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLEVAMQA EEECCCCEEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC GAKVIAITSSNTPLAKRATVALETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAAP CCEEEEEECCCCCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NAEITEAVAQARSRAGDDESADVLDWLSHGAAPAAARE CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure STGAQTKPAAGQHADGPRLLADIGGTNARFALEVGPGEITQIRVYPGADYPTLTDAIRK CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHH YLKDAKIGRVNHAAIAIANPVDGDQVRMTNHDWSFSIEATRRALGFDTLLVVNDFTALAM HHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEHHHHHHHHCCCEEEEHHHHHHHHH ALPGLTDAQRQQVGGGTRRQNSVIGLMGPGTGLGVSGLIPADDRWIALGSEGGHASFAPM HCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC DEREDLVMQYARKKFAHVSFERVCAGPGIELVYRALAGRDKKRVPSGFGTPEVVERAHAG CCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHCCC DALALEAVDVFCAILGTFAGNLAVTLGSLGGVYIGGGVVLKLGELFLKSRFRERFEQKGR CHHHHHHHHHHHHHHHHHHCHHEEEHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC FSEYLANVPTYLITADYPAFLGVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERRV HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHH ADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQGLSDFKLKLATGLTGTIPMS HHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC HSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVAQAIEILNGARRIEFYGLGNSNI CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCE VAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLEVAMQA EEECCCCEEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC GAKVIAITSSNTPLAKRATVALETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAAP CCEEEEEECCCCCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NAEITEAVAQARSRAGDDESADVLDWLSHGAAPAAARE CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA