| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pgl [H]
Identifier: 238026461
GI number: 238026461
Start: 867168
End: 867848
Strand: Reverse
Name: pgl [H]
Synonym: bglu_1g08050
Alternate gene names: 238026461
Gene position: 867848-867168 (Counterclockwise)
Preceding gene: 238026462
Following gene: 238026460
Centisome position: 22.22
GC content: 73.27
Gene sequence:
>681_bases GTGATCGAGCTTCACGCATTCGAAAGCCCGCACGCGCAGTGCGAGGCGCTCGCGCAGGCGGTGCGCGCGGCGCTGGAAGC GCCGCTCGCCGAGCACGCGCGCGCGACGCTCGCCGTGTCGGGCGGCACCAGCCCGCGCCCGTTCCTGCAAACGCTGTCCC GCTACCCGCTCGACTGGGCGAAGGTCGACGTCACGCTGGTGGACGACCGCTGGGTGGCCGACACCGACGGCGCGAGCAAC GCACGGCTGGTGCGCGACACGCTGCTGCAGAACGCAGCGGCCGCCGCCCGCTTCCAGCCGCTCGTCGACGTCTCGCGCAC GCTCGACGCCCAGGTCGCCGCGCTGAACGCCGACCCGGCGTACCGGCTGCCGCACGTCGCCGTGCTCGGCATGGGCGAGG ACGGCCACACCGCCTCGCTTTTCGCCGACGCGCCCGAGTGGGAACTGGCGATCAGCACGCCGGCGCGCTACGTGGCCGTG CATCCCGGCGCCGCGCCGCATCCGCGCGTGAGCCTGTCGCTCGACGCGCTGCGCCACGTCGAGCGCCTGTTCCTCCTGAT CGCCGGCGCCCGCAAGCGCGAGGTGCTGGAGGCCGCCGCCGCGGCGCCGCAGCGCAACGCGATTTCCCAACTGGCCAACG ACAAGGGGACCAAGCTCGATGTCTACTGGTGCGCAAACTAA
Upstream 100 bases:
>100_bases CTGAGCGAAACCGCGATGCGGCGGCTCGCGGCCGGTCGGCCACGCCGCGGCATCGGCAATCCATGATGTCCGAAATCAAT AAGAGCAGCCTGGAGGAGAA
Downstream 100 bases:
>100_bases ACCGGCAGCGGGCCAGCACGCCGACGGCCCGCGCCTGCTGGCCGACATCGGCGGCACCAACGCGCGCTTCGCGCTCGAGG TCGGCCCCGGCGAGATCACG
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MIELHAFESPHAQCEALAQAVRAALEAPLAEHARATLAVSGGTSPRPFLQTLSRYPLDWAKVDVTLVDDRWVADTDGASN ARLVRDTLLQNAAAAARFQPLVDVSRTLDAQVAALNADPAYRLPHVAVLGMGEDGHTASLFADAPEWELAISTPARYVAV HPGAAPHPRVSLSLDALRHVERLFLLIAGARKREVLEAAAAAPQRNAISQLANDKGTKLDVYWCAN
Sequences:
>Translated_226_residues MIELHAFESPHAQCEALAQAVRAALEAPLAEHARATLAVSGGTSPRPFLQTLSRYPLDWAKVDVTLVDDRWVADTDGASN ARLVRDTLLQNAAAAARFQPLVDVSRTLDAQVAALNADPAYRLPHVAVLGMGEDGHTASLFADAPEWELAISTPARYVAV HPGAAPHPRVSLSLDALRHVERLFLLIAGARKREVLEAAAAAPQRNAISQLANDKGTKLDVYWCAN >Mature_226_residues MIELHAFESPHAQCEALAQAVRAALEAPLAEHARATLAVSGGTSPRPFLQTLSRYPLDWAKVDVTLVDDRWVADTDGASN ARLVRDTLLQNAAAAARFQPLVDVSRTLDAQVAALNADPAYRLPHVAVLGMGEDGHTASLFADAPEWELAISTPARYVAV HPGAAPHPRVSLSLDALRHVERLFLLIAGARKREVLEAAAAAPQRNAISQLANDKGTKLDVYWCAN
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=174, Percent_Identity=32.7586206896552, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 24259; Mature: 24259
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELHAFESPHAQCEALAQAVRAALEAPLAEHARATLAVSGGTSPRPFLQTLSRYPLDWA CEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCEEEEEECCCCCCHHHHHHHHHCCCCCC KVDVTLVDDRWVADTDGASNARLVRDTLLQNAAAAARFQPLVDVSRTLDAQVAALNADPA EEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC YRLPHVAVLGMGEDGHTASLFADAPEWELAISTPARYVAVHPGAAPHPRVSLSLDALRHV CCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCEEEEHHHHHHH ERLFLLIAGARKREVLEAAAAAPQRNAISQLANDKGTKLDVYWCAN HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MIELHAFESPHAQCEALAQAVRAALEAPLAEHARATLAVSGGTSPRPFLQTLSRYPLDWA CEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCEEEEEECCCCCCHHHHHHHHHCCCCCC KVDVTLVDDRWVADTDGASNARLVRDTLLQNAAAAARFQPLVDVSRTLDAQVAALNADPA EEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC YRLPHVAVLGMGEDGHTASLFADAPEWELAISTPARYVAVHPGAAPHPRVSLSLDALRHV CCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCEEEEHHHHHHH ERLFLLIAGARKREVLEAAAAAPQRNAISQLANDKGTKLDVYWCAN HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]