| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is bcr [H]
Identifier: 238026459
GI number: 238026459
Start: 863472
End: 865094
Strand: Direct
Name: bcr [H]
Synonym: bglu_1g08030
Alternate gene names: 238026459
Gene position: 863472-865094 (Clockwise)
Preceding gene: 238026455
Following gene: 238026463
Centisome position: 22.1
GC content: 71.84
Gene sequence:
>1623_bases ATGCTGCGCGAGAAACCGCAGCCCCAGACGTCGCGCACGGCCTCGCCGGCGCGCACGCGCGCGGCGAGTTCGGGCAACTC GGGCCACGGCCATTTCCGGGGGCTCCAGATCAGCAGGAAGGCGGTCATGTCGGTCGGGTCAACGGGGTTCTCGGGCGGGG GGCGCGAATTCGGGGGCAGCGCCTGCGCGAGCTTACCCGATCGCCGCCGGCGCCGCGTCGATGCGCGTGCACCGGCCCGG CGGCGGGGCCGGACGAACGATTTCGGACAAGCGCGTACAATTACCGCTTTGCGGCGGCCGTCCGGCCGCCCGTCCCGCCC GAGCCGGGCCGCGCCGAATCGCGTCGAACCGCCTCGCGGCGAAGCGAGCCGAAGCGGGCGAAGTCCCGGCCGCTCCCGAG AATTTCCCATGTCGAATCTGGTACGGCGCCGGCCCGACGCCCGGCTCATCCTGTTGCTCGGCGCGCTCGCCGCCTGTGGT CCGATCGGCACCGACATGTACCTGCCGAGCATGCCGTCGGTGGCCGAGAGCCTCGGCACCAGCGCGGCGGCCGTGCAATG GACGCTCACCAGCTTCATTGCGGGCTTCTCGCTCGGCATGCTGCTGTACGGCCCGCTGTCCGACGCGCTCGGGCGCCGGC CGGTGCTGCTCGGCGGCATCGTGCTGTTCACGGTGGCGGGCGTCGGCTGCTTCGTGGCGCCGAGCATCGGCGCGCTGATC GTGCTGCGCTTCCTGCAGGCGCTCGGCGCGGGCGCGGCCTCGGTGTTGTCGCGCGCCATCGCGCGCGACGCGCACGAACC GGCCGACGCGGCCCGCGTGCTGTCGATGGTGGCCATCGTCACCTCGGTCGGCCCGCTGCTCGCGCCGCTGCTGGGCGGGC AGATCCTGCGCTTCGCCGGCTGGCGCACGGTGTTCGTGGTGCTGGCGGTGTTCGGCCTCGGCTGCGCGATCGCCGCGTTC CTGAAGGTGCCGGAGACCTGGCCTAAGGAGCGGCGCCGGTCTTCGGCGATCCTGGGCTCGTTCGCGTCCTACGGGCGCAT CATCGGCGATCCGGTGGCCTGGGGGCACATGCTCTGCGGCGGCATGGCGTTCGCCTCGATGATCACGTACATCACCGCCA CGCCGTTCGTCTACATCGAGTATTTCCACGTCTCGGCGCAGCACTACGGCCTGCTGTTCGGCCTGAACATCATCGGCATC ATCATCGGCAACTTCATCAACACGCGCGTGGTCGGCCGGCTCGGCTCGCTGCGGCTGATCTCGGCGGCCTCGCTGGTGAG CAGCATCGCCTCGTTCGCGGTGGCGTTCTTCGCGCTGACGGGGATCGGCGGGCTCTGGTCGATCGTCGCGGGGCTGTTCT TCGTGGTCGGCGTGATCGGCCTGCTGTCGGCCAACTGCTCGACCGATCTGATGCACCGCTATCCCCACAACGCGGGGGCC GCGGCCGCCGTGTTCGGGGCGATGCAGCTCGGGCTGGGCGCCGTGGCGAGCGCGGTGGTGGGGCTGCTGGCCGACGGCAC GCCGTTCGGCATGGGCGTGACCATCGCGATCACGGGCGCGCTGTGCCTGATGGGCCGCAGGCTCGTGCTGCGCTGGCACG GCCGGCCGGTGCGCGGCGACTGA
Upstream 100 bases:
>100_bases GTCGGCGACCTCGTAGGGCGCGCGCGTCACGTAGCCGGAGCCGAACACGCCCCTGGGCTCCTGGGCGACGCGGTGCAGGA ACACGCGATCGCCGGGCAGG
Downstream 100 bases:
>100_bases GGCCGCGCACCGCGGGACGCACGGGAAGGCGCCCGCGGCCGAAGCCGCAAGGCGAAGCGCGAAACGACACCGGGGCCGGC GCCCCGAAAGCGCCGGCCCG
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MLREKPQPQTSRTASPARTRAASSGNSGHGHFRGLQISRKAVMSVGSTGFSGGGREFGGSACASLPDRRRRRVDARAPAR RRGRTNDFGQARTITALRRPSGRPSRPSRAAPNRVEPPRGEASRSGRSPGRSREFPMSNLVRRRPDARLILLLGALAACG PIGTDMYLPSMPSVAESLGTSAAAVQWTLTSFIAGFSLGMLLYGPLSDALGRRPVLLGGIVLFTVAGVGCFVAPSIGALI VLRFLQALGAGAASVLSRAIARDAHEPADAARVLSMVAIVTSVGPLLAPLLGGQILRFAGWRTVFVVLAVFGLGCAIAAF LKVPETWPKERRRSSAILGSFASYGRIIGDPVAWGHMLCGGMAFASMITYITATPFVYIEYFHVSAQHYGLLFGLNIIGI IIGNFINTRVVGRLGSLRLISAASLVSSIASFAVAFFALTGIGGLWSIVAGLFFVVGVIGLLSANCSTDLMHRYPHNAGA AAAVFGAMQLGLGAVASAVVGLLADGTPFGMGVTIAITGALCLMGRRLVLRWHGRPVRGD
Sequences:
>Translated_540_residues MLREKPQPQTSRTASPARTRAASSGNSGHGHFRGLQISRKAVMSVGSTGFSGGGREFGGSACASLPDRRRRRVDARAPAR RRGRTNDFGQARTITALRRPSGRPSRPSRAAPNRVEPPRGEASRSGRSPGRSREFPMSNLVRRRPDARLILLLGALAACG PIGTDMYLPSMPSVAESLGTSAAAVQWTLTSFIAGFSLGMLLYGPLSDALGRRPVLLGGIVLFTVAGVGCFVAPSIGALI VLRFLQALGAGAASVLSRAIARDAHEPADAARVLSMVAIVTSVGPLLAPLLGGQILRFAGWRTVFVVLAVFGLGCAIAAF LKVPETWPKERRRSSAILGSFASYGRIIGDPVAWGHMLCGGMAFASMITYITATPFVYIEYFHVSAQHYGLLFGLNIIGI IIGNFINTRVVGRLGSLRLISAASLVSSIASFAVAFFALTGIGGLWSIVAGLFFVVGVIGLLSANCSTDLMHRYPHNAGA AAAVFGAMQLGLGAVASAVVGLLADGTPFGMGVTIAITGALCLMGRRLVLRWHGRPVRGD >Mature_540_residues MLREKPQPQTSRTASPARTRAASSGNSGHGHFRGLQISRKAVMSVGSTGFSGGGREFGGSACASLPDRRRRRVDARAPAR RRGRTNDFGQARTITALRRPSGRPSRPSRAAPNRVEPPRGEASRSGRSPGRSREFPMSNLVRRRPDARLILLLGALAACG PIGTDMYLPSMPSVAESLGTSAAAVQWTLTSFIAGFSLGMLLYGPLSDALGRRPVLLGGIVLFTVAGVGCFVAPSIGALI VLRFLQALGAGAASVLSRAIARDAHEPADAARVLSMVAIVTSVGPLLAPLLGGQILRFAGWRTVFVVLAVFGLGCAIAAF LKVPETWPKERRRSSAILGSFASYGRIIGDPVAWGHMLCGGMAFASMITYITATPFVYIEYFHVSAQHYGLLFGLNIIGI IIGNFINTRVVGRLGSLRLISAASLVSSIASFAVAFFALTGIGGLWSIVAGLFFVVGVIGLLSANCSTDLMHRYPHNAGA AAAVFGAMQLGLGAVASAVVGLLADGTPFGMGVTIAITGALCLMGRRLVLRWHGRPVRGD
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=390, Percent_Identity=34.3589743589744, Blast_Score=238, Evalue=5e-64, Organism=Escherichia coli, GI48994889, Length=375, Percent_Identity=30.6666666666667, Blast_Score=135, Evalue=9e-33, Organism=Escherichia coli, GI1790146, Length=257, Percent_Identity=28.7937743190661, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI87082312, Length=344, Percent_Identity=27.3255813953488, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787065, Length=260, Percent_Identity=30, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1790794, Length=165, Percent_Identity=24.2424242424242, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790195, Length=164, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789042, Length=138, Percent_Identity=28.2608695652174, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324264, Length=178, Percent_Identity=24.7191011235955, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6319480, Length=384, Percent_Identity=21.09375, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6319657, Length=213, Percent_Identity=24.4131455399061, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6319517, Length=285, Percent_Identity=24.5614035087719, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 56573; Mature: 56573
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLREKPQPQTSRTASPARTRAASSGNSGHGHFRGLQISRKAVMSVGSTGFSGGGREFGGS CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCH ACASLPDRRRRRVDARAPARRRGRTNDFGQARTITALRRPSGRPSRPSRAAPNRVEPPRG HHHCCCHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC EASRSGRSPGRSREFPMSNLVRRRPDARLILLLGALAACGPIGTDMYLPSMPSVAESLGT CCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC SAAAVQWTLTSFIAGFSLGMLLYGPLSDALGRRPVLLGGIVLFTVAGVGCFVAPSIGALI CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLRFLQALGAGAASVLSRAIARDAHEPADAARVLSMVAIVTSVGPLLAPLLGGQILRFAG HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRTVFVVLAVFGLGCAIAAFLKVPETWPKERRRSSAILGSFASYGRIIGDPVAWGHMLCG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHH GMAFASMITYITATPFVYIEYFHVSAQHYGLLFGLNIIGIIIGNFINTRVVGRLGSLRLI HHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH SAASLVSSIASFAVAFFALTGIGGLWSIVAGLFFVVGVIGLLSANCSTDLMHRYPHNAGA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCH AAAVFGAMQLGLGAVASAVVGLLADGTPFGMGVTIAITGALCLMGRRLVLRWHGRPVRGD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCC >Mature Secondary Structure MLREKPQPQTSRTASPARTRAASSGNSGHGHFRGLQISRKAVMSVGSTGFSGGGREFGGS CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCH ACASLPDRRRRRVDARAPARRRGRTNDFGQARTITALRRPSGRPSRPSRAAPNRVEPPRG HHHCCCHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC EASRSGRSPGRSREFPMSNLVRRRPDARLILLLGALAACGPIGTDMYLPSMPSVAESLGT CCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC SAAAVQWTLTSFIAGFSLGMLLYGPLSDALGRRPVLLGGIVLFTVAGVGCFVAPSIGALI CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLRFLQALGAGAASVLSRAIARDAHEPADAARVLSMVAIVTSVGPLLAPLLGGQILRFAG HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRTVFVVLAVFGLGCAIAAFLKVPETWPKERRRSSAILGSFASYGRIIGDPVAWGHMLCG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHH GMAFASMITYITATPFVYIEYFHVSAQHYGLLFGLNIIGIIIGNFINTRVVGRLGSLRLI HHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH SAASLVSSIASFAVAFFALTGIGGLWSIVAGLFFVVGVIGLLSANCSTDLMHRYPHNAGA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCH AAAVFGAMQLGLGAVASAVVGLLADGTPFGMGVTIAITGALCLMGRRLVLRWHGRPVRGD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]