| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yqgE [C]
Identifier: 238026384
GI number: 238026384
Start: 778188
End: 778766
Strand: Direct
Name: yqgE [C]
Synonym: bglu_1g07190
Alternate gene names: 238026384
Gene position: 778188-778766 (Clockwise)
Preceding gene: 238026383
Following gene: 238026385
Centisome position: 19.92
GC content: 65.63
Gene sequence:
>579_bases ATGTCAAAGAGTTCCGATCGCATCAATCTCACCAACCAGTTCCTGATCGCCATGCCCAGCATGGCCGATCCGACGTTCGC CGGGACGGTGGTCTATCTTTGCGATCACAGCGAGCGCGGCGCGCTCGGCCTCGTCATCAACCGTCCCACCGACATCGACC TCGAATCGCTGTTCAACCGCATCGACCTCAAGCTCGAGATCGAGCCGCTGCTGCACATTCCCGTCTATTTCGGCGGCCCG GTGCAGACCGAGCGCGGCTTCGTGCTGCACGAGCCGGTGGAGGGCAGCACCTACAGTTCGTCGATGACGGTAGAGGGCGG GCTCGAGATGACGACGTCGAAGGACGTGCTCGAGGCGGTCGCCTCGGGCAGCGGCCCGAAACGCTTCCTGTTGACGCTCG GCCATGCCGGCTGGGGCGCCGGCCAGCTCGAGGATGAAATCTCGAAGAACGGCTGGCTGACCGTGGCGGCCGACCCGCGC ATCGTGTTCGACACGCCGGCCGAGGAGCGCTTCGAAGCCGCGCTCGGCCTGCTCGGCGTGTCCTCGACGATGCTTTCCGG CGAGGCGGGCCACGCATGA
Upstream 100 bases:
>100_bases ATAGAGTGCGACGTGATCCGTCATATCGACCCTCGCGGCGGGCGGCGCCGGATGACATGGCGCCGGCTGCTACCGCGCGG TCTTTGCTAAAATTCAAACC
Downstream 100 bases:
>100_bases GCGGTTCGAACGCGCGCGAGGCGACGCTGCTCGCGTTCGACTACGGCGAGAAGCGGATCGGCGTGGCGGTCGGCAACACG CTCACGCGCACGGCTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSKSSDRINLTNQFLIAMPSMADPTFAGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGP VQTERGFVLHEPVEGSTYSSSMTVEGGLEMTTSKDVLEAVASGSGPKRFLLTLGHAGWGAGQLEDEISKNGWLTVAADPR IVFDTPAEERFEAALGLLGVSSTMLSGEAGHA
Sequences:
>Translated_192_residues MSKSSDRINLTNQFLIAMPSMADPTFAGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGP VQTERGFVLHEPVEGSTYSSSMTVEGGLEMTTSKDVLEAVASGSGPKRFLLTLGHAGWGAGQLEDEISKNGWLTVAADPR IVFDTPAEERFEAALGLLGVSSTMLSGEAGHA >Mature_191_residues SKSSDRINLTNQFLIAMPSMADPTFAGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPV QTERGFVLHEPVEGSTYSSSMTVEGGLEMTTSKDVLEAVASGSGPKRFLLTLGHAGWGAGQLEDEISKNGWLTVAADPRI VFDTPAEERFEAALGLLGVSSTMLSGEAGHA
Specific function: Unknown
COG id: COG1678
COG function: function code K; Putative transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0301 (AlgH) family [H]
Homologues:
Organism=Escherichia coli, GI87082187, Length=191, Percent_Identity=42.4083769633508, Blast_Score=159, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003774 [H]
Pfam domain/function: PF02622 DUF179 [H]
EC number: NA
Molecular weight: Translated: 20579; Mature: 20447
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSSDRINLTNQFLIAMPSMADPTFAGTVVYLCDHSERGALGLVINRPTDIDLESLFNR CCCCCCEEEECCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHH IDLKLEIEPLLHIPVYFGGPVQTERGFVLHEPVEGSTYSSSMTVEGGLEMTTSKDVLEAV CCEEEEECEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEECCCEEECCHHHHHHHH ASGSGPKRFLLTLGHAGWGAGQLEDEISKNGWLTVAADPRIVFDTPAEERFEAALGLLGV HCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCEEEEECCEEEEECCHHHHHHHHHHHHCC SSTMLSGEAGHA CHHEECCCCCCC >Mature Secondary Structure SKSSDRINLTNQFLIAMPSMADPTFAGTVVYLCDHSERGALGLVINRPTDIDLESLFNR CCCCCEEEECCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHH IDLKLEIEPLLHIPVYFGGPVQTERGFVLHEPVEGSTYSSSMTVEGGLEMTTSKDVLEAV CCEEEEECEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEECCCEEECCHHHHHHHH ASGSGPKRFLLTLGHAGWGAGQLEDEISKNGWLTVAADPRIVFDTPAEERFEAALGLLGV HCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCEEEEECCEEEEECCHHHHHHHHHHHHCC SSTMLSGEAGHA CHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA