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The map label for this gene is yqgF [C]

Identifier: 238026385

GI number: 238026385

Start: 778763

End: 779221

Strand: Direct

Name: yqgF [C]

Synonym: bglu_1g07200

Alternate gene names: 238026385

Gene position: 778763-779221 (Clockwise)

Preceding gene: 238026384

Following gene: 238026386

Centisome position: 19.94

GC content: 67.54

Gene sequence:

>459_bases
ATGAGCGGTTCGAACGCGCGCGAGGCGACGCTGCTCGCGTTCGACTACGGCGAGAAGCGGATCGGCGTGGCGGTCGGCAA
CACGCTCACGCGCACGGCTCGCGCGCTCGTCATCGTCGCCAATCTGAATCGCGACCATCGCTTCAAGGCAATCGGCGAGC
TGATCGCCGAATGGCGTCCCGACGCGCTGGTGGTCGGCCTGCCGCTGCATCCGGACGGCACGCCGCACGAGATGACGCAG
CAGGCGAGGCGCTTCGGCAACCAGTTGAACGGCCGCTTCAGCCTGCCCGTCAGCTGGATCGACGAGCGCTATTCGTCGGT
CGAGGCGCGCGCCCAGTTGCGCGAGCGCGGCGCGAGAGGTGCCGCAAGAGGCGCCGCCGCGGCCGTCGATGCCGAAGCGG
CCCGCGTGATCCTTCAAACCCATCTCGACCAGTTGTCCGATCATCATGAGTTCCATTGA

Upstream 100 bases:

>100_bases
CGCGCATCGTGTTCGACACGCCGGCCGAGGAGCGCTTCGAAGCCGCGCTCGGCCTGCTCGGCGTGTCCTCGACGATGCTT
TCCGGCGAGGCGGGCCACGC

Downstream 100 bases:

>100_bases
CGCCGAAGCGCTCTATCGCGTGCTGCTCGACCAGATTCGCGACGCCTGGGGCCAAGCCGCGTTCGCGGCGCCCGACGGCC
CGGCGATCGCCGGCATTCAC

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSGSNAREATLLAFDYGEKRIGVAVGNTLTRTARALVIVANLNRDHRFKAIGELIAEWRPDALVVGLPLHPDGTPHEMTQ
QARRFGNQLNGRFSLPVSWIDERYSSVEARAQLRERGARGAARGAAAAVDAEAARVILQTHLDQLSDHHEFH

Sequences:

>Translated_152_residues
MSGSNAREATLLAFDYGEKRIGVAVGNTLTRTARALVIVANLNRDHRFKAIGELIAEWRPDALVVGLPLHPDGTPHEMTQ
QARRFGNQLNGRFSLPVSWIDERYSSVEARAQLRERGARGAARGAAAAVDAEAARVILQTHLDQLSDHHEFH
>Mature_151_residues
SGSNAREATLLAFDYGEKRIGVAVGNTLTRTARALVIVANLNRDHRFKAIGELIAEWRPDALVVGLPLHPDGTPHEMTQQ
ARRFGNQLNGRFSLPVSWIDERYSSVEARAQLRERGARGAARGAAAAVDAEAARVILQTHLDQLSDHHEFH

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=136, Percent_Identity=44.1176470588235, Blast_Score=113, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 16742; Mature: 16611

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSNAREATLLAFDYGEKRIGVAVGNTLTRTARALVIVANLNRDHRFKAIGELIAEWRP
CCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCC
DALVVGLPLHPDGTPHEMTQQARRFGNQLNGRFSLPVSWIDERYSSVEARAQLRERGARG
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCC
AARGAAAAVDAEAARVILQTHLDQLSDHHEFH
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGSNAREATLLAFDYGEKRIGVAVGNTLTRTARALVIVANLNRDHRFKAIGELIAEWRP
CCCCCCCEEEEEEECCCCEEEEEECCHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCC
DALVVGLPLHPDGTPHEMTQQARRFGNQLNGRFSLPVSWIDERYSSVEARAQLRERGARG
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCC
AARGAAAAVDAEAARVILQTHLDQLSDHHEFH
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA