| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026383
Identifier: 238026383
GI number: 238026383
Start: 776559
End: 777845
Strand: Direct
Name: 238026383
Synonym: bglu_1g07180
Alternate gene names: NA
Gene position: 776559-777845 (Clockwise)
Preceding gene: 238026382
Following gene: 238026384
Centisome position: 19.88
GC content: 77.23
Gene sequence:
>1287_bases ATGACGATGTCCCCGGCCGCCGTGCCGATCCCCGAGGCACTGCCGAATCCCCGAGGCGGTGCGGTGCTGCTCGTCGAGGC GGCGCTGGCCGAGGCCAGCACCGCGTCGGGCGAGGCGCCCGCGCGGCTGCTGCGGGCCGGCGCGGCAGCCTTGGGCGACG CGGGCTGGCTGGCCGCGCAGCGTTATGCGCTGGCGTTGGCCGCCGCGTCCGTGACGACCGACGCTGATGGCGCGCAGCGC CTGCCGTGGCGCGAGGCCCTGCGCGACTTCCGTTGGGCCGTGGCGCGCCGCAACCTGCGCGAGCTCGCCTGTTCGCCGCT GCTGCACGCGCATTACCGCGCATCGTGCGCCTCGGCCGAGCCCGCAGGCGCCCGCGCCGCGCGCGAGGTGCCGTTCGACG CACTGGCGCTGGCCGGCCGCCCGGTGCCGCCCGCGCGGCTCGACGCGCTGCCTGCCGACCGGTTGGCGCATCTGCGCGCC GTCTACGAGGCGGCGCTGCTGATGGTGCTGCGCGAGCCCGACGCGCCGCCCGCGGCCGCGCTCGATGCGCTCGACGCCTG CCTCGCCGCGCTCGCCGGCGGCGATCCCTATGATTATTGGCGGCTGGCCCGCGCCTGCCTGCGCGCGCTGCGCGGCACGC CGGGGGCCGAACTGCGGCGCTGGCTCGCGCGCGGCAACCTGCAATTGCGCGAGCAGGCCAACGGCGTGCGCGTGGCCGAC GTGGCCCTCGTGCGCGAGACGCTCGCGCTGGTCTGGCGCGATCTCGCCCTGTACGGCGCGGCGGCCGAGGACGCCGCCGA GGTCGAGTTGTTGAACGACTACGGCCTCACGGTGGACTGGCAAACGGCCGGCTCGCAGGCATCGAAGATGCTCTGGGAGG CCGACGCGCTGCGCGATGCCGCGGCGATCCGCCAACTCGGCGTGGTGACCGTCAACGGCCATGCCTACGAAGATTTCCTG CAGACCGCCGACGCGTCGATGGCCGAGCTGGCAAGCGATCCGGCCGCGGCCGACGCGACGCGGGCCTGGCGCGCGTCGGC CGCGGCCTATCGGGTCGGCACTGCCGCGGCCGCGCTCGGGCTCGGCCAGACGGCGCTGCTGGCCGACGCGGTCGGGCTCG GCTGGCGCCGCATCACCCACGGCGAGCCGCCGGGCGACGGCGGCGCGGCGCTCGCGGCCGGCTCCGACGCACTGCGCGCG GCGCTCTACAAGATCGCGGCCGGCGTGGCGCCGCCCGATCTGGCGGCCGCGCGCGAGGCACTGGGCGCGGCGCTCGAGGC CGCCTGA
Upstream 100 bases:
>100_bases GGCCGCGGGCCGGCGTGCCTGACGCGACGCTGGCCCGGCGGTATGCCGCACGGCTCCGGCCGCGCGGCATTTTCGTATTC GCGTCGATGATTGCGAGCCC
Downstream 100 bases:
>100_bases GCGCCGTTCACCGTCTTGTCCCCCTTATGTCCTGTGGCGGGCGCGCCACCGAGGGCCGGCCCCGCCGCGCTGGGCGCGAA GCGGCCGGATCGACGGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTMSPAAVPIPEALPNPRGGAVLLVEAALAEASTASGEAPARLLRAGAAALGDAGWLAAQRYALALAAASVTTDADGAQR LPWREALRDFRWAVARRNLRELACSPLLHAHYRASCASAEPAGARAAREVPFDALALAGRPVPPARLDALPADRLAHLRA VYEAALLMVLREPDAPPAAALDALDACLAALAGGDPYDYWRLARACLRALRGTPGAELRRWLARGNLQLREQANGVRVAD VALVRETLALVWRDLALYGAAAEDAAEVELLNDYGLTVDWQTAGSQASKMLWEADALRDAAAIRQLGVVTVNGHAYEDFL QTADASMAELASDPAAADATRAWRASAAAYRVGTAAAALGLGQTALLADAVGLGWRRITHGEPPGDGGAALAAGSDALRA ALYKIAAGVAPPDLAAAREALGAALEAA
Sequences:
>Translated_428_residues MTMSPAAVPIPEALPNPRGGAVLLVEAALAEASTASGEAPARLLRAGAAALGDAGWLAAQRYALALAAASVTTDADGAQR LPWREALRDFRWAVARRNLRELACSPLLHAHYRASCASAEPAGARAAREVPFDALALAGRPVPPARLDALPADRLAHLRA VYEAALLMVLREPDAPPAAALDALDACLAALAGGDPYDYWRLARACLRALRGTPGAELRRWLARGNLQLREQANGVRVAD VALVRETLALVWRDLALYGAAAEDAAEVELLNDYGLTVDWQTAGSQASKMLWEADALRDAAAIRQLGVVTVNGHAYEDFL QTADASMAELASDPAAADATRAWRASAAAYRVGTAAAALGLGQTALLADAVGLGWRRITHGEPPGDGGAALAAGSDALRA ALYKIAAGVAPPDLAAAREALGAALEAA >Mature_427_residues TMSPAAVPIPEALPNPRGGAVLLVEAALAEASTASGEAPARLLRAGAAALGDAGWLAAQRYALALAAASVTTDADGAQRL PWREALRDFRWAVARRNLRELACSPLLHAHYRASCASAEPAGARAAREVPFDALALAGRPVPPARLDALPADRLAHLRAV YEAALLMVLREPDAPPAAALDALDACLAALAGGDPYDYWRLARACLRALRGTPGAELRRWLARGNLQLREQANGVRVADV ALVRETLALVWRDLALYGAAAEDAAEVELLNDYGLTVDWQTAGSQASKMLWEADALRDAAAIRQLGVVTVNGHAYEDFLQ TADASMAELASDPAAADATRAWRASAAAYRVGTAAAALGLGQTALLADAVGLGWRRITHGEPPGDGGAALAAGSDALRAA LYKIAAGVAPPDLAAAREALGAALEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44285; Mature: 44153
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSPAAVPIPEALPNPRGGAVLLVEAALAEASTASGEAPARLLRAGAAALGDAGWLAAQ CCCCCCCCCCHHHCCCCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHH RYALALAAASVTTDADGAQRLPWREALRDFRWAVARRNLRELACSPLLHAHYRASCASAE HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAGARAAREVPFDALALAGRPVPPARLDALPADRLAHLRAVYEAALLMVLREPDAPPAAA CCCCHHHHHCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LDALDACLAALAGGDPYDYWRLARACLRALRGTPGAELRRWLARGNLQLREQANGVRVAD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHCCCCCHHH VALVRETLALVWRDLALYGAAAEDAAEVELLNDYGLTVDWQTAGSQASKMLWEADALRDA HHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCEEEECCCCHHHHHHHHHHHHHHHH AAIRQLGVVTVNGHAYEDFLQTADASMAELASDPAAADATRAWRASAAAYRVGTAAAALG HHHHHCCCEEECCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGQTALLADAVGLGWRRITHGEPPGDGGAALAAGSDALRAALYKIAAGVAPPDLAAAREA CCHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH LGAALEAA HHHHHHCC >Mature Secondary Structure TMSPAAVPIPEALPNPRGGAVLLVEAALAEASTASGEAPARLLRAGAAALGDAGWLAAQ CCCCCCCCCHHHCCCCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHH RYALALAAASVTTDADGAQRLPWREALRDFRWAVARRNLRELACSPLLHAHYRASCASAE HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAGARAAREVPFDALALAGRPVPPARLDALPADRLAHLRAVYEAALLMVLREPDAPPAAA CCCCHHHHHCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LDALDACLAALAGGDPYDYWRLARACLRALRGTPGAELRRWLARGNLQLREQANGVRVAD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHCCCCCHHH VALVRETLALVWRDLALYGAAAEDAAEVELLNDYGLTVDWQTAGSQASKMLWEADALRDA HHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCEEEECCCCHHHHHHHHHHHHHHHH AAIRQLGVVTVNGHAYEDFLQTADASMAELASDPAAADATRAWRASAAAYRVGTAAAALG HHHHHCCCEEECCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGQTALLADAVGLGWRRITHGEPPGDGGAALAAGSDALRAALYKIAAGVAPPDLAAAREA CCHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH LGAALEAA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA