Click here to switch to the map view.

The map label for this gene is yjnA [H]

Identifier: 238026374

GI number: 238026374

Start: 764268

End: 765056

Strand: Reverse

Name: yjnA [H]

Synonym: bglu_1g07080

Alternate gene names: 238026374

Gene position: 765056-764268 (Counterclockwise)

Preceding gene: 238026381

Following gene: 238026372

Centisome position: 19.58

GC content: 71.36

Gene sequence:

>789_bases
ATGTCGCTTCCCCATATCGATCTGCTCTACACCGCCTCCGGCCTGTTCGTCGGCTTTCTCGTCGGCATGACGGGCGTGGG
CGGCGGCTCGCTGATGACGCCGATCCTGGTACTGCTGTTCAACGTCCATCCGGCCACGGCGGTCGGCACCGACCTGCTCT
ACGCGGCGGCCACCAAGGCCACCGGCACCCTCGTGCACGGCGCCAAGGGCTCGGTCGACTGGCGCATCACGGGCCGCCTC
GCGGCGGGCAGCGTGCCGGCCGCCGCGCTCACGCTGTGGCTGCTGCACGCACACGGCCTGGGCTCGACCTCGACCAACCG
GCTGATCCAGATCGTGCTCGGCGGCGCGCTGCTGCTGACCTCGGTGGCGCTGATGTTCCGGCCGCAGCTCGCCGCGTTCG
CCTCGCGCCACGCACTGGCGCCGAATCCGGCCCGCACCGTCGCGCTGACGGTGCTGACCGGCATCGTGCTCGGCGTGCTG
GTGTCGCTGACCTCGGTGGGCGCGGGCGCGATCGGCGTGACGGTGCTGCTGCTGCTCTATCCGACGCTGTCCACCACGCG
CATCGTCGGTTCGGACATCGCGCACGCGGTGCCGCTCACGCTGGTGGCCGGGATGGGCCACTGGCTGCTCGGCTCGGTCG
ACTGGTCGATGCTGGTGTCGCTGCTGCTCGGCTCGCTGCCCGGCATCGTGGCGGGCAGCCATCTGTCAACGCGCGCGCCC
GAACGCCTGCTGCGCAACGTTCTGGCCGCGACGCTGGTGGCAGTCGGCCTGAAGCTCGTCGCCTCCTGA

Upstream 100 bases:

>100_bases
TGCCCGCCACCGCACCGCGCCAGCCGACATTCCCACGCCCGAGCGGCAATTTTGCGACAATGGCGGGTTTGGACCGCGCG
CAACCACCGAGCCCTCGCCG

Downstream 100 bases:

>100_bases
CGCGGCACGGCGCGCGCCGCGGGCCTGCCTCCGGCGGCCGGCACGACCCCGCCTGCCGCCTCAAAAAGAATGCGCCGCTC
GAGGCGGCGCAGGTTTCACG

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSLPHIDLLYTASGLFVGFLVGMTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAAATKATGTLVHGAKGSVDWRITGRL
AAGSVPAAALTLWLLHAHGLGSTSTNRLIQIVLGGALLLTSVALMFRPQLAAFASRHALAPNPARTVALTVLTGIVLGVL
VSLTSVGAGAIGVTVLLLLYPTLSTTRIVGSDIAHAVPLTLVAGMGHWLLGSVDWSMLVSLLLGSLPGIVAGSHLSTRAP
ERLLRNVLAATLVAVGLKLVAS

Sequences:

>Translated_262_residues
MSLPHIDLLYTASGLFVGFLVGMTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAAATKATGTLVHGAKGSVDWRITGRL
AAGSVPAAALTLWLLHAHGLGSTSTNRLIQIVLGGALLLTSVALMFRPQLAAFASRHALAPNPARTVALTVLTGIVLGVL
VSLTSVGAGAIGVTVLLLLYPTLSTTRIVGSDIAHAVPLTLVAGMGHWLLGSVDWSMLVSLLLGSLPGIVAGSHLSTRAP
ERLLRNVLAATLVAVGLKLVAS
>Mature_261_residues
SLPHIDLLYTASGLFVGFLVGMTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAAATKATGTLVHGAKGSVDWRITGRLA
AGSVPAAALTLWLLHAHGLGSTSTNRLIQIVLGGALLLTSVALMFRPQLAAFASRHALAPNPARTVALTVLTGIVLGVLV
SLTSVGAGAIGVTVLLLLYPTLSTTRIVGSDIAHAVPLTLVAGMGHWLLGSVDWSMLVSLLLGSLPGIVAGSHLSTRAPE
RLLRNVLAATLVAVGLKLVAS

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26629; Mature: 26498

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPHIDLLYTASGLFVGFLVGMTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAAATKA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
TGTLVHGAKGSVDWRITGRLAAGSVPAAALTLWLLHAHGLGSTSTNRLIQIVLGGALLLT
CCCEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SVALMFRPQLAAFASRHALAPNPARTVALTVLTGIVLGVLVSLTSVGAGAIGVTVLLLLY
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
PTLSTTRIVGSDIAHAVPLTLVAGMGHWLLGSVDWSMLVSLLLGSLPGIVAGSHLSTRAP
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCCH
ERLLRNVLAATLVAVGLKLVAS
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLPHIDLLYTASGLFVGFLVGMTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAAATKA
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
TGTLVHGAKGSVDWRITGRLAAGSVPAAALTLWLLHAHGLGSTSTNRLIQIVLGGALLLT
CCCEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SVALMFRPQLAAFASRHALAPNPARTVALTVLTGIVLGVLVSLTSVGAGAIGVTVLLLLY
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
PTLSTTRIVGSDIAHAVPLTLVAGMGHWLLGSVDWSMLVSLLLGSLPGIVAGSHLSTRAP
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCCH
ERLLRNVLAATLVAVGLKLVAS
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]