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The map label for this gene is dedA [H]

Identifier: 238026312

GI number: 238026312

Start: 689442

End: 690137

Strand: Direct

Name: dedA [H]

Synonym: bglu_1g06460

Alternate gene names: 238026312

Gene position: 689442-690137 (Clockwise)

Preceding gene: 238026309

Following gene: 238026318

Centisome position: 17.65

GC content: 66.67

Gene sequence:

>696_bases
TTGGATACGCTGCTTCACTTCGTCAATCTGGTCCTGCACATCGACGCGTTCCTCGGCAAGTTCATCCAGTATTACGGCGC
CTGGGTGTATCTGGTGCTGTTCCTGATCGTGTTCTGCGAAACCGGGCTGGTGATCCTGCCGTTCCTGCCCGGCGATTCGC
TGCTGTTCATCGCGGGCGCGTTCGCCGCGTCGGGCGAGATGAGCCTGGCGGCGCTGATCGTGCTGCTGCTGGTGGCCGCC
ACCCTGGGCAACACGGTCAACTACCTGCTCGGCCGCGCGATCGGCCCGAAGGTGTTCGACACGCATGTGCCGGTGCTCGA
GCGCTTCCTCGACCGCGCCGCGCTGCAGAAAACCCACGATTTCTACGAGCGTCACGGCGGCAAGACGCTGGTGCTGGCGC
GCTTCATCCCGGTGGTACGCACCTTCGCGCCGTTCGTCGCCGGGGTCTCGGCGATGCGCTTGGCGCGCTTTCAGCTCTTC
AACGTCGCCGGCGCGCTGGCCTGGGTGCTGCTGCTCACCCTGCTCGGCTATTTTTTCGGCAACATCCCGTTCATTCGCCA
GTACCTGAACGTGATCGTGCTGGTGGGAGTCGGCGCGGCGGCCGTGCCGGTGGTGATCGGCGCGCTCTGGAAGCTGCTGC
GCGGTCGGACCCGCCCGTCGCGGGGCGGCCCGAATACGCCGCGCGGGCGCGGCTGA

Upstream 100 bases:

>100_bases
CCCGGCCGGCGGCGCGCCTGTTCGGCTCGCCCGCCGGGCCGCCCCCCAGCCCGCGCGCTCGTCCCGCTCCCGCTCCTGTT
CCCGAACCGAAGGAAACGTC

Downstream 100 bases:

>100_bases
GGCCCGTGCCGCCGCGGCGCGGTTCGCGCCTTATCCGGCCGAGCGTTGGATGGTCGGCGTCTCCGGCGTCGGATAGCCGG
CCTGACGGAAGGTGTCGAGG

Product: putative DedA family transmembrane protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDTLLHFVNLVLHIDAFLGKFIQYYGAWVYLVLFLIVFCETGLVILPFLPGDSLLFIAGAFAASGEMSLAALIVLLLVAA
TLGNTVNYLLGRAIGPKVFDTHVPVLERFLDRAALQKTHDFYERHGGKTLVLARFIPVVRTFAPFVAGVSAMRLARFQLF
NVAGALAWVLLLTLLGYFFGNIPFIRQYLNVIVLVGVGAAAVPVVIGALWKLLRGRTRPSRGGPNTPRGRG

Sequences:

>Translated_231_residues
MDTLLHFVNLVLHIDAFLGKFIQYYGAWVYLVLFLIVFCETGLVILPFLPGDSLLFIAGAFAASGEMSLAALIVLLLVAA
TLGNTVNYLLGRAIGPKVFDTHVPVLERFLDRAALQKTHDFYERHGGKTLVLARFIPVVRTFAPFVAGVSAMRLARFQLF
NVAGALAWVLLLTLLGYFFGNIPFIRQYLNVIVLVGVGAAAVPVVIGALWKLLRGRTRPSRGGPNTPRGRG
>Mature_231_residues
MDTLLHFVNLVLHIDAFLGKFIQYYGAWVYLVLFLIVFCETGLVILPFLPGDSLLFIAGAFAASGEMSLAALIVLLLVAA
TLGNTVNYLLGRAIGPKVFDTHVPVLERFLDRAALQKTHDFYERHGGKTLVLARFIPVVRTFAPFVAGVSAMRLARFQLF
NVAGALAWVLLLTLLGYFFGNIPFIRQYLNVIVLVGVGAAAVPVVIGALWKLLRGRTRPSRGGPNTPRGRG

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=208, Percent_Identity=49.5192307692308, Blast_Score=208, Evalue=2e-55,
Organism=Escherichia coli, GI1789481, Length=164, Percent_Identity=42.0731707317073, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789384, Length=169, Percent_Identity=37.2781065088757, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25254; Mature: 25254

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLLHFVNLVLHIDAFLGKFIQYYGAWVYLVLFLIVFCETGLVILPFLPGDSLLFIAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
FAASGEMSLAALIVLLLVAATLGNTVNYLLGRAIGPKVFDTHVPVLERFLDRAALQKTHD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FYERHGGKTLVLARFIPVVRTFAPFVAGVSAMRLARFQLFNVAGALAWVLLLTLLGYFFG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NIPFIRQYLNVIVLVGVGAAAVPVVIGALWKLLRGRTRPSRGGPNTPRGRG
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDTLLHFVNLVLHIDAFLGKFIQYYGAWVYLVLFLIVFCETGLVILPFLPGDSLLFIAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
FAASGEMSLAALIVLLLVAATLGNTVNYLLGRAIGPKVFDTHVPVLERFLDRAALQKTHD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FYERHGGKTLVLARFIPVVRTFAPFVAGVSAMRLARFQLFNVAGALAWVLLLTLLGYFFG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NIPFIRQYLNVIVLVGVGAAAVPVVIGALWKLLRGRTRPSRGGPNTPRGRG
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]