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The map label for this gene is bexD [H]

Identifier: 238026318

GI number: 238026318

Start: 697056

End: 698288

Strand: Direct

Name: bexD [H]

Synonym: bglu_1g06520

Alternate gene names: 238026318

Gene position: 697056-698288 (Clockwise)

Preceding gene: 238026312

Following gene: 238026319

Centisome position: 17.84

GC content: 61.72

Gene sequence:

>1233_bases
GTGCGACAATTCAGATCCGTAGATTTTCCGTTTCCCTGGCAACACATGTCGCTTTTGCTCCGTGGTGTTACGTGTTCGGT
CCTTGTCAGCGGTGCGCTAGTCGGCTGCTCGATCATTCCGACGTCAGGGCCTAGCCGGTCCGCGATTGTGCAATCCGCCA
ACGGGTCCGCCGAGGCGACGGCCGGCATGGCAGGGATCCAGGTCGTCGACCTGACCGACTCCATCGCGCGCCGGCTTTAT
GCCGAACGCGAGCAGGGCGATTTCGCCACCACGCTGGGTATCGATACGCACTTTCGTCAGCAACTCGGGATCGGCGATAC
GATCGAGGTGTCGATCTGGGAGGCGCCGCCCGCGACCTTGTTCGGTGCCGCGCAAGCCGACACGCGCAGTAGCGGCGCAA
GCGCGCCGAGCAATGCGCGCGTGACCGTATTGCCAGACCAGACCATCGACGGCGACGGCAATATCAACGTGCCGTTCGTC
GGCGCCGTCAAGGCTCAGGGCAAGACGCCGACGCAGCTCGAGCGTGACATCACGTTGCGTCTGAAGAATATGGCGCACGA
TCCCCAGGTGCTGGTGAAACTGTCACGAAATGTAACTTCCTATGTCACCGTGGTGGGCGACGTGGTCTCCAGCAATCGCA
TGCAGTTGTCGGCGAGAGGCGAGCGCCTGCTCGATGCGTTGGCCAGCGCTGGCGGCGTGCGTCAGCCGATCGACAAGATC
ACGTTGCAGGTGACGCGCGGCGACAAGGTTGCTTCCTTGCCGTTGCAGACCGTGATTCGCGATCCGCGCCAGAACGTGCC
GCTGCACGCCGGCGACGTGGTGACGGCGTTGTACCAGCCCTACAGCTTCACCGCGCTCGGCGCGACGGGCAAGAATCAGG
AAATCAATTTCGAGGCCCAGGGCATCTCGCTTGCTCAGGCGATCGCGCGCGCAGGCGGCCTGGAGGATTCGCGTTCGGAT
GCGCAGGGCGTGTTCATCTTCCGCCTCGAGGACGCCAATGCGTTGCCGTGGCCTGTCAAGCCGGTGCGCACCACGGCGGA
CGGCAAGGTGCCCGTCATCTATCGCATGAACCTGAAGGACCCGAGTGCATTTTTCACCGCGCAGAGTTTCGTGATGGATA
ACAAGGATCTCCTGTACGTGTCGAATGCGCCGATTACCGAGCTTCAGAAAGTCTTGAATCTGGTGTTCTCGGTTGCCTAT
CCCGTCGTGACGGGTGTTCAGTCGTTCAAATAA

Upstream 100 bases:

>100_bases
TGTTGGCAAGCGGTTGCGGCACCAATTATTACCGGCGTGCCGGCGGGCGCGGTGGCACTCGGCCCAGTCTGCAAAAAACT
AGTTTATTGCATCTACTAAC

Downstream 100 bases:

>100_bases
GAATCAAGGGTTGGCATATCGCACGGATGCCCAAGTCCGCTGCGATATGCTGCATCTGACGCGACTTCTAATGGATCGCC
GGATTTGTCGAGTCACGGCG

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MRQFRSVDFPFPWQHMSLLLRGVTCSVLVSGALVGCSIIPTSGPSRSAIVQSANGSAEATAGMAGIQVVDLTDSIARRLY
AEREQGDFATTLGIDTHFRQQLGIGDTIEVSIWEAPPATLFGAAQADTRSSGASAPSNARVTVLPDQTIDGDGNINVPFV
GAVKAQGKTPTQLERDITLRLKNMAHDPQVLVKLSRNVTSYVTVVGDVVSSNRMQLSARGERLLDALASAGGVRQPIDKI
TLQVTRGDKVASLPLQTVIRDPRQNVPLHAGDVVTALYQPYSFTALGATGKNQEINFEAQGISLAQAIARAGGLEDSRSD
AQGVFIFRLEDANALPWPVKPVRTTADGKVPVIYRMNLKDPSAFFTAQSFVMDNKDLLYVSNAPITELQKVLNLVFSVAY
PVVTGVQSFK

Sequences:

>Translated_410_residues
MRQFRSVDFPFPWQHMSLLLRGVTCSVLVSGALVGCSIIPTSGPSRSAIVQSANGSAEATAGMAGIQVVDLTDSIARRLY
AEREQGDFATTLGIDTHFRQQLGIGDTIEVSIWEAPPATLFGAAQADTRSSGASAPSNARVTVLPDQTIDGDGNINVPFV
GAVKAQGKTPTQLERDITLRLKNMAHDPQVLVKLSRNVTSYVTVVGDVVSSNRMQLSARGERLLDALASAGGVRQPIDKI
TLQVTRGDKVASLPLQTVIRDPRQNVPLHAGDVVTALYQPYSFTALGATGKNQEINFEAQGISLAQAIARAGGLEDSRSD
AQGVFIFRLEDANALPWPVKPVRTTADGKVPVIYRMNLKDPSAFFTAQSFVMDNKDLLYVSNAPITELQKVLNLVFSVAY
PVVTGVQSFK
>Mature_410_residues
MRQFRSVDFPFPWQHMSLLLRGVTCSVLVSGALVGCSIIPTSGPSRSAIVQSANGSAEATAGMAGIQVVDLTDSIARRLY
AEREQGDFATTLGIDTHFRQQLGIGDTIEVSIWEAPPATLFGAAQADTRSSGASAPSNARVTVLPDQTIDGDGNINVPFV
GAVKAQGKTPTQLERDITLRLKNMAHDPQVLVKLSRNVTSYVTVVGDVVSSNRMQLSARGERLLDALASAGGVRQPIDKI
TLQVTRGDKVASLPLQTVIRDPRQNVPLHAGDVVTALYQPYSFTALGATGKNQEINFEAQGISLAQAIARAGGLEDSRSD
AQGVFIFRLEDANALPWPVKPVRTTADGKVPVIYRMNLKDPSAFFTAQSFVMDNKDLLYVSNAPITELQKVLNLVFSVAY
PVVTGVQSFK

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=321, Percent_Identity=27.1028037383178, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1788376, Length=317, Percent_Identity=24.6056782334385, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 43950; Mature: 43950

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQFRSVDFPFPWQHMSLLLRGVTCSVLVSGALVGCSIIPTSGPSRSAIVQSANGSAEAT
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCCCHHH
AGMAGIQVVDLTDSIARRLYAEREQGDFATTLGIDTHFRQQLGIGDTIEVSIWEAPPATL
CCCCCEEEEECHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCEEEEEEECCCCCCE
FGAAQADTRSSGASAPSNARVTVLPDQTIDGDGNINVPFVGAVKAQGKTPTQLERDITLR
EECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHEE
LKNMAHDPQVLVKLSRNVTSYVTVVGDVVSSNRMQLSARGERLLDALASAGGVRQPIDKI
EHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCE
TLQVTRGDKVASLPLQTVIRDPRQNVPLHAGDVVTALYQPYSFTALGATGKNQEINFEAQ
EEEEECCCCEECCCHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCEEEEEEC
GISLAQAIARAGGLEDSRSDAQGVFIFRLEDANALPWPVKPVRTTADGKVPVIYRMNLKD
CHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEECCCCCEEEEEEECCCC
PSAFFTAQSFVMDNKDLLYVSNAPITELQKVLNLVFSVAYPVVTGVQSFK
CCHHHEEHHHEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQFRSVDFPFPWQHMSLLLRGVTCSVLVSGALVGCSIIPTSGPSRSAIVQSANGSAEAT
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCCCHHH
AGMAGIQVVDLTDSIARRLYAEREQGDFATTLGIDTHFRQQLGIGDTIEVSIWEAPPATL
CCCCCEEEEECHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCEEEEEEECCCCCCE
FGAAQADTRSSGASAPSNARVTVLPDQTIDGDGNINVPFVGAVKAQGKTPTQLERDITLR
EECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHEE
LKNMAHDPQVLVKLSRNVTSYVTVVGDVVSSNRMQLSARGERLLDALASAGGVRQPIDKI
EHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCE
TLQVTRGDKVASLPLQTVIRDPRQNVPLHAGDVVTALYQPYSFTALGATGKNQEINFEAQ
EEEEECCCCEECCCHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCEEEEEEC
GISLAQAIARAGGLEDSRSDAQGVFIFRLEDANALPWPVKPVRTTADGKVPVIYRMNLKD
CHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEECCCCCEEEEEEECCCC
PSAFFTAQSFVMDNKDLLYVSNAPITELQKVLNLVFSVAYPVVTGVQSFK
CCHHHEEHHHEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]