| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is purM [H]
Identifier: 238026309
GI number: 238026309
Start: 684994
End: 686049
Strand: Direct
Name: purM [H]
Synonym: bglu_1g06430
Alternate gene names: 238026309
Gene position: 684994-686049 (Clockwise)
Preceding gene: 238026302
Following gene: 238026312
Centisome position: 17.53
GC content: 68.66
Gene sequence:
>1056_bases ATGACTTCTCCGAAATCCGCTCCCGACGCCCAAGGTCTTTCCTACCGTGACGCGGGCGTCGACATCGACGCGGGCGACGC GCTCGTCGACAAGATCAAGCCATTTGCCAAGAAAACGCTGCGCGACGGCGTGCTGGGCGGGATCGGCGGATTCGGCGCAC TGTTCGAAGTGCCGAAGAAGTATCGGGAGCCGGTGCTGGTGTCGGGCACCGACGGCGTGGGCACCAAGCTCAAGCTCGCG TTCCACCTGAACCGCCACGACACGGTCGGCCAGGATCTGGTGGCGATGAGCGTGAACGACATCCTCGTGCAGGGCGCCGA GCCGCTGTTCTTCCTCGACTACTTCGCCTGCGGCAAGCTCGACGTCGAGACGGCGGCGACGGTGGTGAAGGGCATCGCGA CCGGCTGCGAGCTGGCCGGCTGCGCGCTGATCGGCGGCGAGACGGCGGAAATGCCCGGCATGTATCCGGACGGCGAGTAC GATCTGGCCGGCTTCGCGGTGGGTGCGGTCGAGAAGAGCCGGATCATCGACGGCAGCACCATCGCCGCGGGCGACGTGGT GCTGGGCCTCGCGTCGAGCGGCATCCACTCGAACGGCTTTTCGCTGGTGCGCAAGATCATCGAGCGCGCCAATCCCGATC TCGACGCCGCCTTCGACGGCCGCACGCTGGCCGACGCGCTGATCGCGCCGACCCGCATCTACGTGAAGCCGCTGCTCGCG CTGATGGCCAAGCTGCCCGTCAAGGGCATGGCGCACATCACGGGCGGCGGCCTCGTCGAGAACATCCCGCGCGTGCTGCG CGAGGGCCTGACGGCCGAACTGGACCAGACCGCCTGGACGCTGCCGCCGCTGTTCCAGTGGCTGCAGCAGCACGGCGGCG TGGCCGATGCGGAGATGCACCGCGTGTTCAATTGCGGGATCGGGATGGCCGTGATCGTCGCGGCGGCCGATGCCGACGCG GCCGTGGCGGAACTGAGCGCCGCCGGCGAGCAGGTCTGGAAGATCGGCAAGGTGCGCGCCACGCGCGAGGGCGAGGCGCA GACCGTGGTGGTCTGA
Upstream 100 bases:
>100_bases TCGGACACGATGCGTTACCTGGAGAGATCGGCGCGGGGAATTCGGCCGGGCGTCCGGCTTCGGGTAAAATCGCATTTTAC CGACCTTCTCGCATTCCCCC
Downstream 100 bases:
>100_bases GGCTGGCGCAGCAGGAGGATCGGTGGCACGGCGCTCGTGCCGTGCAGCAGGAAGGGCCGCGGAGCGCGGCCTTTTTTGTT GCCTGGCGCGGACGCGTTCA
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTSPKSAPDAQGLSYRDAGVDIDAGDALVDKIKPFAKKTLRDGVLGGIGGFGALFEVPKKYREPVLVSGTDGVGTKLKLA FHLNRHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKLDVETAATVVKGIATGCELAGCALIGGETAEMPGMYPDGEY DLAGFAVGAVEKSRIIDGSTIAAGDVVLGLASSGIHSNGFSLVRKIIERANPDLDAAFDGRTLADALIAPTRIYVKPLLA LMAKLPVKGMAHITGGGLVENIPRVLREGLTAELDQTAWTLPPLFQWLQQHGGVADAEMHRVFNCGIGMAVIVAAADADA AVAELSAAGEQVWKIGKVRATREGEAQTVVV
Sequences:
>Translated_351_residues MTSPKSAPDAQGLSYRDAGVDIDAGDALVDKIKPFAKKTLRDGVLGGIGGFGALFEVPKKYREPVLVSGTDGVGTKLKLA FHLNRHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKLDVETAATVVKGIATGCELAGCALIGGETAEMPGMYPDGEY DLAGFAVGAVEKSRIIDGSTIAAGDVVLGLASSGIHSNGFSLVRKIIERANPDLDAAFDGRTLADALIAPTRIYVKPLLA LMAKLPVKGMAHITGGGLVENIPRVLREGLTAELDQTAWTLPPLFQWLQQHGGVADAEMHRVFNCGIGMAVIVAAADADA AVAELSAAGEQVWKIGKVRATREGEAQTVVV >Mature_350_residues TSPKSAPDAQGLSYRDAGVDIDAGDALVDKIKPFAKKTLRDGVLGGIGGFGALFEVPKKYREPVLVSGTDGVGTKLKLAF HLNRHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKLDVETAATVVKGIATGCELAGCALIGGETAEMPGMYPDGEYD LAGFAVGAVEKSRIIDGSTIAAGDVVLGLASSGIHSNGFSLVRKIIERANPDLDAAFDGRTLADALIAPTRIYVKPLLAL MAKLPVKGMAHITGGGLVENIPRVLREGLTAELDQTAWTLPPLFQWLQQHGGVADAEMHRVFNCGIGMAVIVAAADADAA VAELSAAGEQVWKIGKVRATREGEAQTVVV
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=346, Percent_Identity=54.0462427745665, Blast_Score=368, Evalue=1e-102, Organism=Homo sapiens, GI209869995, Length=346, Percent_Identity=54.0462427745665, Blast_Score=368, Evalue=1e-102, Organism=Homo sapiens, GI209869993, Length=346, Percent_Identity=54.0462427745665, Blast_Score=368, Evalue=1e-102, Organism=Escherichia coli, GI1788845, Length=343, Percent_Identity=60.0583090379009, Blast_Score=417, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17567511, Length=345, Percent_Identity=44.9275362318841, Blast_Score=267, Evalue=8e-72, Organism=Saccharomyces cerevisiae, GI6321203, Length=335, Percent_Identity=49.5522388059701, Blast_Score=323, Evalue=2e-89, Organism=Drosophila melanogaster, GI24582400, Length=303, Percent_Identity=44.5544554455446, Blast_Score=255, Evalue=4e-68,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 36652; Mature: 36520
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPKSAPDAQGLSYRDAGVDIDAGDALVDKIKPFAKKTLRDGVLGGIGGFGALFEVPKK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YREPVLVSGTDGVGTKLKLAFHLNRHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKL HCCCEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCCC DVETAATVVKGIATGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVEKSRIIDGST CHHHHHHHHHHHHCCCHHHCEEEECCCCCCCCCCCCCCCCCCHHEEECCHHHHHCCCCCC IAAGDVVLGLASSGIHSNGFSLVRKIIERANPDLDAAFDGRTLADALIAPTRIYVKPLLA EECCHHHEEHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHH LMAKLPVKGMAHITGGGLVENIPRVLREGLTAELDQTAWTLPPLFQWLQQHGGVADAEMH HHHHCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHH RVFNCGIGMAVIVAAADADAAVAELSAAGEQVWKIGKVRATREGEAQTVVV HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEC >Mature Secondary Structure TSPKSAPDAQGLSYRDAGVDIDAGDALVDKIKPFAKKTLRDGVLGGIGGFGALFEVPKK CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YREPVLVSGTDGVGTKLKLAFHLNRHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKL HCCCEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCCC DVETAATVVKGIATGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVEKSRIIDGST CHHHHHHHHHHHHCCCHHHCEEEECCCCCCCCCCCCCCCCCCHHEEECCHHHHHCCCCCC IAAGDVVLGLASSGIHSNGFSLVRKIIERANPDLDAAFDGRTLADALIAPTRIYVKPLLA EECCHHHEEHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHH LMAKLPVKGMAHITGGGLVENIPRVLREGLTAELDQTAWTLPPLFQWLQQHGGVADAEMH HHHHCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHH RVFNCGIGMAVIVAAADADAAVAELSAAGEQVWKIGKVRATREGEAQTVVV HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA