| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yceI [C]
Identifier: 238026269
GI number: 238026269
Start: 632758
End: 633318
Strand: Direct
Name: yceI [C]
Synonym: bglu_1g06020
Alternate gene names: 238026269
Gene position: 632758-633318 (Clockwise)
Preceding gene: 339905957
Following gene: 238026270
Centisome position: 16.2
GC content: 65.95
Gene sequence:
>561_bases ATGAAGATTGCATTGCATCGTTCCGTGCTCGCGGCCGTGGCCGCCGCCGCGCTCGCCTTCTCGGGCAGCGCGCTCGCGCA GATGGACCTCGCCAAGAGCAAGGTGTCGGCCGTCTCGAAGCAGATGAACGTGCCGACCGAGGGCGTGTTCAAGAAGTTCA GCGCCGACCTGAAGTTCGATCCGGCCAAGGCGGCCCAGGGCAGCGCGCGCGTGAGCATCGACGTCGCCAGCTTCGACCTG GGCGACAAGATGTACAACGACCAGGTGGCCGGCAAGGAGTGGTTCGACGCGAAGGCGTTCCCGCAGGCGAGCTTCGTCTC GTCGTCGATCGCGCCGGCGGGCGGCAACAAGTACGAGGTGGCCGGCAAGCTGACCATCAAGGGCAAGACGGTGCCGGTCA CGGTGCCCGTGACGGTCACCGACAGCGGCGCGACGCGCGTGTTCGACGGCGTGCTGCCGATCAAGCGCTCGACCTTCGAG ATCGGCACCGGCGAATGGAAGGACACCTCGATCGTCGCCGACGAAGTCCAGATCAAGTTCCATCTCGTCGCCGCGAAGTG A
Upstream 100 bases:
>100_bases TGTCGCTGCACCTGCTCGGTGCGCTCAAGCACCAGTTGCTCGATCGCGACGGCGTGCTCGCGGCGCATGCTCCCGTTCCT CAAATAAGACAAGGCTCGTC
Downstream 100 bases:
>100_bases TCGCGCCGGCGAATCGTATCCGGGCACCGCGCTGCCGTGGCGCCCGTTCAACCGCAAACTAGGAGAATGATTTGAACAAG CCCCTGATGATGGCCGCCGG
Product: YceI, base-induced periplasmic protein
Products: NA
Alternate protein names: Signal Peptide Protein; YceI Like Family; Cytochrome B; Ycei Family Protein; Signal Peptide; YceI-Like Family Protein; YceI/Cytochrome
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKIALHRSVLAAVAAAALAFSGSALAQMDLAKSKVSAVSKQMNVPTEGVFKKFSADLKFDPAKAAQGSARVSIDVASFDL GDKMYNDQVAGKEWFDAKAFPQASFVSSSIAPAGGNKYEVAGKLTIKGKTVPVTVPVTVTDSGATRVFDGVLPIKRSTFE IGTGEWKDTSIVADEVQIKFHLVAAK
Sequences:
>Translated_186_residues MKIALHRSVLAAVAAAALAFSGSALAQMDLAKSKVSAVSKQMNVPTEGVFKKFSADLKFDPAKAAQGSARVSIDVASFDL GDKMYNDQVAGKEWFDAKAFPQASFVSSSIAPAGGNKYEVAGKLTIKGKTVPVTVPVTVTDSGATRVFDGVLPIKRSTFE IGTGEWKDTSIVADEVQIKFHLVAAK >Mature_186_residues MKIALHRSVLAAVAAAALAFSGSALAQMDLAKSKVSAVSKQMNVPTEGVFKKFSADLKFDPAKAAQGSARVSIDVASFDL GDKMYNDQVAGKEWFDAKAFPQASFVSSSIAPAGGNKYEVAGKLTIKGKTVPVTVPVTVTDSGATRVFDGVLPIKRSTFE IGTGEWKDTSIVADEVQIKFHLVAAK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19555; Mature: 19555
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALHRSVLAAVAAAALAFSGSALAQMDLAKSKVSAVSKQMNVPTEGVFKKFSADLKFD CEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC PAKAAQGSARVSIDVASFDLGDKMYNDQVAGKEWFDAKAFPQASFVSSSIAPAGGNKYEV CCCCCCCCCEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEE AGKLTIKGKTVPVTVPVTVTDSGATRVFDGVLPIKRSTFEIGTGEWKDTSIVADEVQIKF EEEEEECCCEEEEEEEEEEECCCCCEEECCCCCCCCCEEEECCCCCCCCEEEEEEEEEEE HLVAAK EEEEEC >Mature Secondary Structure MKIALHRSVLAAVAAAALAFSGSALAQMDLAKSKVSAVSKQMNVPTEGVFKKFSADLKFD CEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC PAKAAQGSARVSIDVASFDLGDKMYNDQVAGKEWFDAKAFPQASFVSSSIAPAGGNKYEV CCCCCCCCCEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEE AGKLTIKGKTVPVTVPVTVTDSGATRVFDGVLPIKRSTFEIGTGEWKDTSIVADEVQIKF EEEEEECCCEEEEEEEEEEECCCCCEEECCCCCCCCCEEEECCCCCCCCEEEEEEEEEEE HLVAAK EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA