| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yceJ [H]
Identifier: 339905957
GI number: 339905957
Start: 632184
End: 632744
Strand: Direct
Name: yceJ [H]
Synonym: NA
Alternate gene names: 339905957
Gene position: 632184-632744 (Clockwise)
Preceding gene: 238026259
Following gene: 238026269
Centisome position: 16.18
GC content: 66.13
Gene sequence:
>561_bases ATGGCATCGACCCTGTCGCCGAACCGGCCGGCCGGCTATACGCGCACCGCGATCGCGCTGCACTGGCTGATCGCGCTGCT GATCGTCTGCGGTTTCGCGCTCGGCTGGGTGATGACCGACATCCCCGGGTTCACGCCCACCAAGCTCAAGTATTTCTCCT GGCACAAGTGGATCGGCGTGACGGTGTTCGCGCTGGCCGTGATCCGCGTGCTGTGGCGAGCAACCCACGTGCCGCCGCCG CTGCCGGCCGGTACCTCGCGGCTCGCCACGGGCGGCGCGCACGCCGTCCATGCGCTGCTCTACCTGCTGATGCTGGCGAT CCCGGTCACGGGCTATCTCTACAGTTCGGCCTCGAACATCCCGGTCGTCTATCTCGGCCTGGTCCCGCTGCCGCGCCTGA TCGATCCCGATCCGGCGTTGAAGCAAACGCTGAAAACCCTGCACGTGACGCTCAATTACACGCTGCTCGCGCTGGTGTCG CTGCACCTGCTCGGTGCGCTCAAGCACCAGTTGCTCGATCGCGACGGCGTGCTCGCGCGCATGCTCCCGTTCCTCAAATA A
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: cytochrome B561
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
NA
Sequences:
>Translated_186_residues MASTLSPNRPAGYTRTAIALHWLIALLIVCGFALGWVMTDIPGFTPTKLKYFSWHKWIGVTVFALAVIRVLWRATHVPPP LPAGTSRLATGGAHAVHALLYLLMLAIPVTGYLYSSASNIPVVYLGLVPLPRLIDPDPALKQTLKTLHVTLNYTLLALVS LHLLGALKHQLLDRDGVLARMLPFLK >Mature_185_residues ASTLSPNRPAGYTRTAIALHWLIALLIVCGFALGWVMTDIPGFTPTKLKYFSWHKWIGVTVFALAVIRVLWRATHVPPPL PAGTSRLATGGAHAVHALLYLLMLAIPVTGYLYSSASNIPVVYLGLVPLPRLIDPDPALKQTLKTLHVTLNYTLLALVSL HLLGALKHQLLDRDGVLARMLPFLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome b561 family [H]
Homologues:
Organism=Escherichia coli, GI1787296, Length=178, Percent_Identity=37.0786516853933, Blast_Score=94, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005797 - InterPro: IPR016174 [H]
Pfam domain/function: PF00033 Cytochrom_B_N [H]
EC number: NA
Molecular weight: Translated: 20342; Mature: 20211
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTLSPNRPAGYTRTAIALHWLIALLIVCGFALGWVMTDIPGFTPTKLKYFSWHKWIGV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TVFALAVIRVLWRATHVPPPLPAGTSRLATGGAHAVHALLYLLMLAIPVTGYLYSSASNI HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVVYLGLVPLPRLIDPDPALKQTLKTLHVTLNYTLLALVSLHLLGALKHQLLDRDGVLAR CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH MLPFLK HHHHCC >Mature Secondary Structure ASTLSPNRPAGYTRTAIALHWLIALLIVCGFALGWVMTDIPGFTPTKLKYFSWHKWIGV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TVFALAVIRVLWRATHVPPPLPAGTSRLATGGAHAVHALLYLLMLAIPVTGYLYSSASNI HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVVYLGLVPLPRLIDPDPALKQTLKTLHVTLNYTLLALVSLHLLGALKHQLLDRDGVLAR CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH MLPFLK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]