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The map label for this gene is ruvC [H]

Identifier: 238026247

GI number: 238026247

Start: 608835

End: 609377

Strand: Reverse

Name: ruvC [H]

Synonym: bglu_1g05800

Alternate gene names: 238026247

Gene position: 609377-608835 (Counterclockwise)

Preceding gene: 238026248

Following gene: 238026246

Centisome position: 15.6

GC content: 71.09

Gene sequence:

>543_bases
ATGCGAATCATCGGCATCGACCCCGGCCTGCGCGTCACCGGCTTCGGCGTGATCGACGTCCACGGCAGCAAGCTCGCCTA
CGTCACGAGCGGCGTGATCCGCACCCCGAGCGCCGACCTCGCGGTGCGGCTCGGCACCATCTTCGACGGCGTCTCGACCC
TGGTGCGCGAGTACAGGCCCGACCAGGCCGCGATCGAGAAGGTGTTCGTCAACGTCAATCCGCAATCGACGCTGCTGCTC
GGCCAGGCCCGCGGCGCGGCGATCTGCGGGCTCGTCTCGGGCAGCCTGCCGGTTGCCGAATACACGCCGACGCAGCTGAA
ACAGGCGATCGTCGGCTATGGCCGCGCCACCAAGGAGCAGATGCAGCAGATGGTGGTGCGGCTGCTCGGCCTGTCGGGGC
TGCCCGGCACCGATGCGGCCGACGCGCTCGGCACCGCGATCTGCCATGCCCACGGCGGCGCCAAGCTCGAGACGCTCGGC
GGCCTCGCGCCCGCGCTCGTCAGGAAGGGCTTTCGCGTGCGGCGCGGCCGGCTGGTCGGCTGA

Upstream 100 bases:

>100_bases
GCAATGCGCCGCGCGGCCGGCCATGACGGCTCGCGCGCGGCGCGATCGTTGTACCATCGCCGGAATCCGTCTTTTCCTCT
CGCCTTTCTTCGGCCAGCCC

Downstream 100 bases:

>100_bases
CGCGGCGCCGCCCTGGCCGCCACGGCGCGCTGGCGGCTGCCGCGTGCGCTACACTCGCGCTTTCCCCCATCGTCGTCCTC
GTCATGATCGGTCGCATCGC

Product: Holliday junction resolvase

Products: NA

Alternate protein names: Holliday junction nuclease ruvC; Holliday junction resolvase ruvC [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRIIGIDPGLRVTGFGVIDVHGSKLAYVTSGVIRTPSADLAVRLGTIFDGVSTLVREYRPDQAAIEKVFVNVNPQSTLLL
GQARGAAICGLVSGSLPVAEYTPTQLKQAIVGYGRATKEQMQQMVVRLLGLSGLPGTDAADALGTAICHAHGGAKLETLG
GLAPALVRKGFRVRRGRLVG

Sequences:

>Translated_180_residues
MRIIGIDPGLRVTGFGVIDVHGSKLAYVTSGVIRTPSADLAVRLGTIFDGVSTLVREYRPDQAAIEKVFVNVNPQSTLLL
GQARGAAICGLVSGSLPVAEYTPTQLKQAIVGYGRATKEQMQQMVVRLLGLSGLPGTDAADALGTAICHAHGGAKLETLG
GLAPALVRKGFRVRRGRLVG
>Mature_180_residues
MRIIGIDPGLRVTGFGVIDVHGSKLAYVTSGVIRTPSADLAVRLGTIFDGVSTLVREYRPDQAAIEKVFVNVNPQSTLLL
GQARGAAICGLVSGSLPVAEYTPTQLKQAIVGYGRATKEQMQQMVVRLLGLSGLPGTDAADALGTAICHAHGGAKLETLG
GLAPALVRKGFRVRRGRLVG

Specific function: Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leav

COG id: COG0817

COG function: function code L; Holliday junction resolvasome, endonuclease subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvC family [H]

Homologues:

Organism=Escherichia coli, GI1788170, Length=149, Percent_Identity=52.3489932885906, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR020563
- InterPro:   IPR002176 [H]

Pfam domain/function: PF02075 RuvC [H]

EC number: =3.1.22.4 [H]

Molecular weight: Translated: 18786; Mature: 18786

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIGIDPGLRVTGFGVIDVHGSKLAYVTSGVIRTPSADLAVRLGTIFDGVSTLVREYRP
CEEEECCCCCEEEEEEEEEECCCEEEEEECCEEECCCCHHEEHHHHHHHHHHHHHHHCCC
DQAAIEKVFVNVNPQSTLLLGQARGAAICGLVSGSLPVAEYTPTQLKQAIVGYGRATKEQ
CHHHHHHEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHH
MQQMVVRLLGLSGLPGTDAADALGTAICHAHGGAKLETLGGLAPALVRKGFRVRRGRLVG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCHHHHHHHCCHHCCCCCCCC
>Mature Secondary Structure
MRIIGIDPGLRVTGFGVIDVHGSKLAYVTSGVIRTPSADLAVRLGTIFDGVSTLVREYRP
CEEEECCCCCEEEEEEEEEECCCEEEEEECCEEECCCCHHEEHHHHHHHHHHHHHHHCCC
DQAAIEKVFVNVNPQSTLLLGQARGAAICGLVSGSLPVAEYTPTQLKQAIVGYGRATKEQ
CHHHHHHEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHH
MQQMVVRLLGLSGLPGTDAADALGTAICHAHGGAKLETLGGLAPALVRKGFRVRRGRLVG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCHHHHHHHCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA