| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is purH [H]
Identifier: 238026248
GI number: 238026248
Start: 609790
End: 611355
Strand: Reverse
Name: purH [H]
Synonym: bglu_1g05810
Alternate gene names: 238026248
Gene position: 611355-609790 (Counterclockwise)
Preceding gene: 238026249
Following gene: 238026247
Centisome position: 15.65
GC content: 67.94
Gene sequence:
>1566_bases ATGATCAAGCAAGCGCTCCTCTCCGTTTCCGATAAAACCGGCATCGTCGAATTCGCGACGGCGTTGTCGCAGCAAGGCGT CAAGCTGCTGTCGACGGGCGGCACCGCGAAACTGCTCGCCGAGGCCGGCCTTCCGGTCACGGAAGTCGCCGACTACACCG GCTTTCCGGAAATGCTCGACGGGCGCGTGAAGACGCTGCACCCGAAGGTCCACGGCGGCATCCTCGCGCGGCGCGACCTG CCCGAGCACATGCAGGCGCTCGACGCGCACGGCATCCCGACCATCGACCTGCTGGTGGTGAACCTCTACCCGTTCGTCGC GACCATCGCGAAGGACGACTGCACGCTCGCCGACGCGATCGAGAACATCGACATCGGCGGCCCGACCATGCTGCGCTCGG CCGCCAAGAACCATCGCGACGTGACGGTGATCGTCGATCCGGCCGACTACGCGGTGGTGCTGGACGAGATGAAGGCCAAC GGCAACACGGTCGGCTACGCCACCAATTTCCGCCTCGCCACCAAGGTGTTCGCGCACACCGCGCAGTACGACGGCGCGAT CACGAACTACCTGACGAGCCTGACCGACGAGTTGCAGCACGCCACGCGCAGCGCCTACCCGGCCACGCTGAACCTCGCGT TCGACAAGGTGCAGGACCTGCGCTACGGCGAGAACCCGCACCAGAGCGCCGCGTTCTACCGCGACCTCGCGGCGCCGGCC GGCGCGCTCGCGAACTATCGCCAGCTGCAGGGCAAGGAACTGTCGTACAACAACATCGCCGATTCGGACGCCGCCTGGGA ATGCGTGAAGACGTTCGACGCGCCGGCCTGCGTGATCATCAAGCACGCCAACCCGTGCGGGGTGGCGGTGGGCGCGAATC CGGCCGAAGCCTACGCCAAGGCGTTCCAGACCGATCCGACCTCGGCGTTCGGCGGCATCATCGCGTTCAACCGCGAACTC GACGAGGCCGGCGCGCAGGCGGTGGCCAAGCAGTTCGTCGAGGTGCTGATCGCGCCGTCGTTCTCCGCAGCGGCGCGCCA GGTGTTCGCCGCCAAGCAGAACGTGCGTCTGCTCGAGATCGCGCTCGGCGACGGCTTCAACGCGTTCGACCTGAAGCGCG TGGGCGGCGGCCTGCTGGTGCAGTCGCTCGATTCGCGCAACGTGCAGCCCGACGAGCTGCGCGTCGTGACCAAGCGCCAG CCGACGCCGAAGGAACTCGACGACCTGCTGTTCGCCTGGCGCGTCGCGAAGTTCGTGAAATCGAACGCGATCGTGTTCTG CGGCAACGGCATGACGCTCGGCGTCGGCGCGGGCCAGATGAGCCGCGTCGATTCGGCCCGCATCGCCGGCATCAAGGCGC AGAACGCGGGCCTCACGCTGGCCGGCTCGGCGGTGGCCTCGGACGCATTCTTCCCGTTCCGCGACGGCCTCGACGTGGTG GTGGCGGCGGGCGCGACGGCCGTGATCCATCCGGGCGGCTCGATGCGCGACGAGGAAGTGATCGCCGCGGCCGACGAGCA CGGCATCGCGATGGTGCTCACGGGCATCCGCCACTTCCGTCACTGA
Upstream 100 bases:
>100_bases GGGCATCAATCGCAATACGCTGCGCAAGAAGCTGCAGCAGCACGGTCTGCTGTAGGCGGCCTCTTCTTCCCCGTTCTCCT GGCTATTGGTGCCCCCGATC
Downstream 100 bases:
>100_bases CCGGCCCGGCCGGACGAGCCGGCGGCCCCGGCCGGCCCGGCCGCGCCGCGCGAGGCACCCGGCGGCGAAGGCATCGCCCT CGCCGCCGGGTTTTGGCTTG
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MIKQALLSVSDKTGIVEFATALSQQGVKLLSTGGTAKLLAEAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDL PEHMQALDAHGIPTIDLLVVNLYPFVATIAKDDCTLADAIENIDIGGPTMLRSAAKNHRDVTVIVDPADYAVVLDEMKAN GNTVGYATNFRLATKVFAHTAQYDGAITNYLTSLTDELQHATRSAYPATLNLAFDKVQDLRYGENPHQSAAFYRDLAAPA GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGANPAEAYAKAFQTDPTSAFGGIIAFNREL DEAGAQAVAKQFVEVLIAPSFSAAARQVFAAKQNVRLLEIALGDGFNAFDLKRVGGGLLVQSLDSRNVQPDELRVVTKRQ PTPKELDDLLFAWRVAKFVKSNAIVFCGNGMTLGVGAGQMSRVDSARIAGIKAQNAGLTLAGSAVASDAFFPFRDGLDVV VAAGATAVIHPGGSMRDEEVIAAADEHGIAMVLTGIRHFRH
Sequences:
>Translated_521_residues MIKQALLSVSDKTGIVEFATALSQQGVKLLSTGGTAKLLAEAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDL PEHMQALDAHGIPTIDLLVVNLYPFVATIAKDDCTLADAIENIDIGGPTMLRSAAKNHRDVTVIVDPADYAVVLDEMKAN GNTVGYATNFRLATKVFAHTAQYDGAITNYLTSLTDELQHATRSAYPATLNLAFDKVQDLRYGENPHQSAAFYRDLAAPA GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGANPAEAYAKAFQTDPTSAFGGIIAFNREL DEAGAQAVAKQFVEVLIAPSFSAAARQVFAAKQNVRLLEIALGDGFNAFDLKRVGGGLLVQSLDSRNVQPDELRVVTKRQ PTPKELDDLLFAWRVAKFVKSNAIVFCGNGMTLGVGAGQMSRVDSARIAGIKAQNAGLTLAGSAVASDAFFPFRDGLDVV VAAGATAVIHPGGSMRDEEVIAAADEHGIAMVLTGIRHFRH >Mature_521_residues MIKQALLSVSDKTGIVEFATALSQQGVKLLSTGGTAKLLAEAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDL PEHMQALDAHGIPTIDLLVVNLYPFVATIAKDDCTLADAIENIDIGGPTMLRSAAKNHRDVTVIVDPADYAVVLDEMKAN GNTVGYATNFRLATKVFAHTAQYDGAITNYLTSLTDELQHATRSAYPATLNLAFDKVQDLRYGENPHQSAAFYRDLAAPA GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGANPAEAYAKAFQTDPTSAFGGIIAFNREL DEAGAQAVAKQFVEVLIAPSFSAAARQVFAAKQNVRLLEIALGDGFNAFDLKRVGGGLLVQSLDSRNVQPDELRVVTKRQ PTPKELDDLLFAWRVAKFVKSNAIVFCGNGMTLGVGAGQMSRVDSARIAGIKAQNAGLTLAGSAVASDAFFPFRDGLDVV VAAGATAVIHPGGSMRDEEVIAAADEHGIAMVLTGIRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=478, Percent_Identity=37.2384937238494, Blast_Score=267, Evalue=2e-71, Organism=Escherichia coli, GI1790439, Length=525, Percent_Identity=62.4761904761905, Blast_Score=657, Evalue=0.0, Organism=Caenorhabditis elegans, GI71985564, Length=612, Percent_Identity=32.6797385620915, Blast_Score=290, Evalue=2e-78, Organism=Caenorhabditis elegans, GI71985574, Length=352, Percent_Identity=24.7159090909091, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71985556, Length=119, Percent_Identity=34.453781512605, Blast_Score=75, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6323768, Length=480, Percent_Identity=35.8333333333333, Blast_Score=262, Evalue=8e-71, Organism=Saccharomyces cerevisiae, GI6323056, Length=488, Percent_Identity=36.0655737704918, Blast_Score=262, Evalue=1e-70, Organism=Drosophila melanogaster, GI24649832, Length=485, Percent_Identity=37.7319587628866, Blast_Score=271, Evalue=8e-73,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 55401; Mature: 55401
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQALLSVSDKTGIVEFATALSQQGVKLLSTGGTAKLLAEAGLPVTEVADYTGFPEMLD CCHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCHHHHHHCCCCHHHHC GRVKTLHPKVHGGILARRDLPEHMQALDAHGIPTIDLLVVNLYPFVATIAKDDCTLADAI CCCEEECCHHHCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH ENIDIGGPTMLRSAAKNHRDVTVIVDPADYAVVLDEMKANGNTVGYATNFRLATKVFAHT HHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEHHCCCCCEEEEEECHHHHHHHHHHH AQYDGAITNYLTSLTDELQHATRSAYPATLNLAFDKVQDLRYGENPHQSAAFYRDLAAPA HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCH GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGANPAEAYAK HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEECCCHHHHHHH AFQTDPTSAFGGIIAFNRELDEAGAQAVAKQFVEVLIAPSFSAAARQVFAAKQNVRLLEI HHCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEE ALGDGFNAFDLKRVGGGLLVQSLDSRNVQPDELRVVTKRQPTPKELDDLLFAWRVAKFVK EECCCCCCHHHHHCCCCCEEEECCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHH SNAIVFCGNGMTLGVGAGQMSRVDSARIAGIKAQNAGLTLAGSAVASDAFFPFRDGLDVV CCEEEEECCCEEEEECCCHHHHCCCHHEEEEEECCCCEEEECCHHHCCCCCCCCCCCCEE VAAGATAVIHPGGSMRDEEVIAAADEHGIAMVLTGIRHFRH EECCCEEEECCCCCCCCCHHEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MIKQALLSVSDKTGIVEFATALSQQGVKLLSTGGTAKLLAEAGLPVTEVADYTGFPEMLD CCHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCHHHHHHCCCCHHHHC GRVKTLHPKVHGGILARRDLPEHMQALDAHGIPTIDLLVVNLYPFVATIAKDDCTLADAI CCCEEECCHHHCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH ENIDIGGPTMLRSAAKNHRDVTVIVDPADYAVVLDEMKANGNTVGYATNFRLATKVFAHT HHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEHHCCCCCEEEEEECHHHHHHHHHHH AQYDGAITNYLTSLTDELQHATRSAYPATLNLAFDKVQDLRYGENPHQSAAFYRDLAAPA HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCH GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGANPAEAYAK HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEECCCHHHHHHH AFQTDPTSAFGGIIAFNRELDEAGAQAVAKQFVEVLIAPSFSAAARQVFAAKQNVRLLEI HHCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEE ALGDGFNAFDLKRVGGGLLVQSLDSRNVQPDELRVVTKRQPTPKELDDLLFAWRVAKFVK EECCCCCCHHHHHCCCCCEEEECCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHH SNAIVFCGNGMTLGVGAGQMSRVDSARIAGIKAQNAGLTLAGSAVASDAFFPFRDGLDVV CCEEEEECCCEEEEECCCHHHHCCCHHEEEEEECCCCEEEECCHHHCCCCCCCCCCCCEE VAAGATAVIHPGGSMRDEEVIAAADEHGIAMVLTGIRHFRH EECCCEEEECCCCCCCCCHHEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA