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The map label for this gene is ruvA [H]

Identifier: 238026246

GI number: 238026246

Start: 608170

End: 608751

Strand: Reverse

Name: ruvA [H]

Synonym: bglu_1g05790

Alternate gene names: 238026246

Gene position: 608751-608170 (Counterclockwise)

Preceding gene: 238026247

Following gene: 238026245

Centisome position: 15.58

GC content: 67.7

Gene sequence:

>582_bases
ATGATCGGTCGCATCGCCGGCACCCTGCTCGAAAAGAATCCTCCCCACCTGCTCGTCGATTGCAACGGCGTCGGCTACGA
GCTCGACGTGCCGATGAGCACGTTCTACAACCTGCCGCCCACGGGCGAGCGCGTGGTGCTGCTCACCCAGCTGATCGTGC
GCGAGGACGCGCACCTGCTGTACGGCTTTCTCACGCCGCAGGAGCGCTCGGCATTCCGCGAGCTGCTGAAGATCACCGGG
ATCGGCGCGCGCATGGCGCTCGCGGTGCTCTCCGGCATGAGCGTGCAGGAGCTCTCGCAGGTGGTGACCATACAGGACGC
CGCGCGCCTGCAGCGGCTGCCGGGCATCGGCAAGAAAACCGCCGAGCGCCTGCTGCTCGAACTGAAGGGCAAGCTCGGCG
CCGACCTCGGCGAGCTGGCCGGCCAGGCCTCGCAGTCGGACCACGCGGCCGACATCCTCAACGCACTGCTCGCGCTCGGC
TACTCGGAGAAGGAAGCGCTGGCCGCCATCAAGAACGTGCCGGCCGGCACCGGCGTGTCCGAGGGCATCAAGCTGTCGCT
GAAGGCACTGTCCAAGACCTGA

Upstream 100 bases:

>100_bases
GCCGGCTGGTCGGCTGACGCGGCGCCGCCCTGGCCGCCACGGCGCGCTGGCGGCTGCCGCGTGCGCTACACTCGCGCTTT
CCCCCATCGTCGTCCTCGTC

Downstream 100 bases:

>100_bases
GCGGGCGAGCCGTGCGGCTACTGTCCCATCTGCGGGCGCGCCGCGCGAGTCGGCCGTTCGGCCGGTTCGTCGGCTCGGTT
GCGCGCGGTACAATGCCCGC

Product: Holliday junction DNA helicase RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MIGRIAGTLLEKNPPHLLVDCNGVGYELDVPMSTFYNLPPTGERVVLLTQLIVREDAHLLYGFLTPQERSAFRELLKITG
IGARMALAVLSGMSVQELSQVVTIQDAARLQRLPGIGKKTAERLLLELKGKLGADLGELAGQASQSDHAADILNALLALG
YSEKEALAAIKNVPAGTGVSEGIKLSLKALSKT

Sequences:

>Translated_193_residues
MIGRIAGTLLEKNPPHLLVDCNGVGYELDVPMSTFYNLPPTGERVVLLTQLIVREDAHLLYGFLTPQERSAFRELLKITG
IGARMALAVLSGMSVQELSQVVTIQDAARLQRLPGIGKKTAERLLLELKGKLGADLGELAGQASQSDHAADILNALLALG
YSEKEALAAIKNVPAGTGVSEGIKLSLKALSKT
>Mature_193_residues
MIGRIAGTLLEKNPPHLLVDCNGVGYELDVPMSTFYNLPPTGERVVLLTQLIVREDAHLLYGFLTPQERSAFRELLKITG
IGARMALAVLSGMSVQELSQVVTIQDAARLQRLPGIGKKTAERLLLELKGKLGADLGELAGQASQSDHAADILNALLALG
YSEKEALAAIKNVPAGTGVSEGIKLSLKALSKT

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

Organism=Escherichia coli, GI1788168, Length=201, Percent_Identity=41.7910447761194, Blast_Score=161, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 20538; Mature: 20538

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRIAGTLLEKNPPHLLVDCNGVGYELDVPMSTFYNLPPTGERVVLLTQLIVREDAHLL
CCCHHHHHHHCCCCCEEEEECCCCCEEECCCHHHHCCCCCCCCHHHHHHHHHHHCCCHHE
YGFLTPQERSAFRELLKITGIGARMALAVLSGMSVQELSQVVTIQDAARLQRLPGIGKKT
EEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
AERLLLELKGKLGADLGELAGQASQSDHAADILNALLALGYSEKEALAAIKNVPAGTGVS
HHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
EGIKLSLKALSKT
CCHHHHHHHHCCC
>Mature Secondary Structure
MIGRIAGTLLEKNPPHLLVDCNGVGYELDVPMSTFYNLPPTGERVVLLTQLIVREDAHLL
CCCHHHHHHHCCCCCEEEEECCCCCEEECCCHHHHCCCCCCCCHHHHHHHHHHHCCCHHE
YGFLTPQERSAFRELLKITGIGARMALAVLSGMSVQELSQVVTIQDAARLQRLPGIGKKT
EEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
AERLLLELKGKLGADLGELAGQASQSDHAADILNALLALGYSEKEALAAIKNVPAGTGVS
HHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
EGIKLSLKALSKT
CCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA