Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is gpmB [H]

Identifier: 238026242

GI number: 238026242

Start: 603898

End: 604560

Strand: Direct

Name: gpmB [H]

Synonym: bglu_1g05750

Alternate gene names: 238026242

Gene position: 603898-604560 (Clockwise)

Preceding gene: 238026241

Following gene: 238026253

Centisome position: 15.46

GC content: 72.4

Gene sequence:

>663_bases
ATGACCACGACGCAAATCCTCTTCATCCGCCACGGCGAAACGCCCTGGAACCGCATCAAGCGCATTCAGGGGCATATCGA
CATCGCGCTCGCCGAGACCGGCGTCCAGCAGGCGGCGCGGCTCGCCGAGCGGCTCGCGCGCGAGGCGGCCGATGGCGCCC
GGCTCGACGCGATCTATTCGAGCGATCTGCAGCGCGCGCGGCAGACCGCGCAGCCGAGCGCCGATGCCCTCGGCCTGCCG
GTGCGGCTCGACGCCGGGCTGCGCGAGCGCGCCTACGGCGCGTTCCAGGGCCACGACAGCGCCGAGATCGCCGCGCGCTA
TCCCGATGCCTATGCGCAGTGGCAGACGCGCGACCCCGGCTTCGAGCCGGCCGGCGGCGAATCGCATCGCGCGTTCCATC
ACCGCGTGCTGCATGCGCTCGCGCCGATCGTGGCCGCGCATCCGGGCGGCCGCATTGCCGTGGTCACGCACGGCGGCGTG
CTCGATTGCATCTATCGCCGCGCGGCCTCGCTGCCGCTCGAGGCGCCGCGCCAGTACGCGCTGCTCAACGCCAGCATCAA
CGTGGTCGAGGCCGACGGCAACGCGCTGCGCGTCGTGCGCTGGGCCGACGTCGCGCATCTCGACGGCGACAGCGACGACG
ACGGCTACCGCAAGGTGCTGTAG

Upstream 100 bases:

>100_bases
CTCGCGCCTGACAGGCCGGCGCGCGACGGACCCGCGCCGGCCGGCTGCCGCGCCCGCTCGGCTCACTGCTTCGCTTCTTC
GCATTCCGATCGGCCAACCG

Downstream 100 bases:

>100_bases
ACGATCACGGCCCCGCGCTCGCGGTGCCGTGGTGCGGTGCCGTTCCTGCCGCCCCTGCGCGGTTCACGGCAGGCCGTGGC
GCGCCTTGTAGGCGAGCGCG

Product: phosphoglycerate mutase family protein

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYSSDLQRARQTAQPSADALGLP
VRLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPGFEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGV
LDCIYRRAASLPLEAPRQYALLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL

Sequences:

>Translated_220_residues
MTTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYSSDLQRARQTAQPSADALGLP
VRLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPGFEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGV
LDCIYRRAASLPLEAPRQYALLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL
>Mature_219_residues
TTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYSSDLQRARQTAQPSADALGLPV
RLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPGFEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGVL
DCIYRRAASLPLEAPRQYALLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL

Specific function: Unknown

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790856, Length=218, Percent_Identity=32.1100917431193, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1786970, Length=119, Percent_Identity=39.4957983193277, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786857, Length=174, Percent_Identity=28.735632183908, Blast_Score=68, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324857, Length=215, Percent_Identity=29.7674418604651, Blast_Score=75, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6322697, Length=222, Percent_Identity=28.8288288288288, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 23990; Mature: 23859

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYS
CCCEEEEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SDLQRARQTAQPSADALGLPVRLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPG
HHHHHHHHHCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCC
FEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGVLDCIYRRAASLPLEAPRQYA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCEE
LLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL
EEECEEEEEECCCCEEEEEEEECEEECCCCCCCCHHHCCC
>Mature Secondary Structure 
TTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYS
CCEEEEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SDLQRARQTAQPSADALGLPVRLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPG
HHHHHHHHHCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCC
FEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGVLDCIYRRAASLPLEAPRQYA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCEE
LLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL
EEECEEEEEECCCCEEEEEEEECEEECCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA