Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is cbbGC [H]

Identifier: 238026205

GI number: 238026205

Start: 565288

End: 566298

Strand: Direct

Name: cbbGC [H]

Synonym: bglu_1g05360

Alternate gene names: 238026205

Gene position: 565288-566298 (Clockwise)

Preceding gene: 238026204

Following gene: 238026207

Centisome position: 14.47

GC content: 63.6

Gene sequence:

>1011_bases
ATGACGATTCGCGTTGCAATCAACGGTTACGGCCGCATTGGCCGCAATACGCTGCGCGCTTTCTATGAAAACGGCAAGAA
GCACGATATCGAGATCGTCGCGATCAACGACCTCGGCGATGCGAAGACCAACGCGCACCTGACGCAGTACGACACCGCGC
ACGGCAAGTTCCCGGGCGAAGTGTCGGTGGACGGCGACTACCTGATCGTCAACGGCGACCGCATCCGCGTGCTGGCCAAC
CGCAACCCGGCCGAACTGCCGTGGGGCGAGCTCGGCGTCGACGTGGTGTTCGAGTGCACGGGCTTCTTCACCACCAAGGA
AAAGGCCAGCGCGCACCTGAAGGGCGGCGCGAAGAAGGTGATCATCTCGGCCCCGGGCGGCAAGGACGTCGACGCGACGA
TCGTCTACGGCGTCAACCACCAGGTGCTGAAGGCCGAGCACACCGTGATCTCGAACGCCTCGTGCACGACCAACTGCCTC
GCGCCGCTCGTCAAGCCGCTGCACGACAAGATCGGCCTCGAGACCGGCCTGATGACGACGGTCCACGCCTACACGAACGA
CCAGGTGCTGACCGACGTCTATCACGAGGACCTGCGCCGCGCGCGCTCGGCCACGCACAGCCAGATTCCGACCAAGACGG
GCGCGGCGGCGGCCGTCGGCCTGGTGCTGCCGGAACTGAACGGCAAGCTCGACGGCTATGCGATCCGCGTGCCCACCATC
AACGTGTCGATCGTCGACCTGTCGTTCATCGCCAAGCGCGACACGACGGTCGAGGAAGTCAACGCGATCATGAAGGAAGC
GTCGGAAGGCTCGCTGAAGGGCATCCTCGCCTATAACGACCAGCCGCTCGTGTCGATCGACTTCAACCACAATCCGGCCT
CGTCGTCGTTCGATTCGACGCTGACGAAGGTGTCGGGCCGTCTCGTCAAGGTGTCGAGCTGGTACGACAACGAATGGGGC
TTCTCGAACCGCATGCTCGACACGGCAGTCGCGTTCGCGAACGCGAAGTAA

Upstream 100 bases:

>100_bases
CGCCTGAGCGTGAGCCAGCGCGCCGGCTGCGCCTCGCCGGCGGGCCGGCGCCGTCGTGAAGCCGGCGATCCGTTTTTTTT
CAGCCATCAGGAGATTAATC

Downstream 100 bases:

>100_bases
CACGCGCCGCGGGCGGTGCCGGCAGTTCCGGCACCGGCTTGCCGGCGAACTCACGGCCCGGCGTCGCGCCTCGTGCGCGG
CGCCGGGCCGTGTCTTTTCG

Product: glyceraldehyde-3-phosphate dehydrogenase, type I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVSVDGDYLIVNGDRIRVLAN
RNPAELPWGELGVDVVFECTGFFTTKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHQVLKAEHTVISNASCTTNCL
APLVKPLHDKIGLETGLMTTVHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI
NVSIVDLSFIAKRDTTVEEVNAIMKEASEGSLKGILAYNDQPLVSIDFNHNPASSSFDSTLTKVSGRLVKVSSWYDNEWG
FSNRMLDTAVAFANAK

Sequences:

>Translated_336_residues
MTIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVSVDGDYLIVNGDRIRVLAN
RNPAELPWGELGVDVVFECTGFFTTKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHQVLKAEHTVISNASCTTNCL
APLVKPLHDKIGLETGLMTTVHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI
NVSIVDLSFIAKRDTTVEEVNAIMKEASEGSLKGILAYNDQPLVSIDFNHNPASSSFDSTLTKVSGRLVKVSSWYDNEWG
FSNRMLDTAVAFANAK
>Mature_335_residues
TIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVSVDGDYLIVNGDRIRVLANR
NPAELPWGELGVDVVFECTGFFTTKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHQVLKAEHTVISNASCTTNCLA
PLVKPLHDKIGLETGLMTTVHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTIN
VSIVDLSFIAKRDTTVEEVNAIMKEASEGSLKGILAYNDQPLVSIDFNHNPASSSFDSTLTKVSGRLVKVSSWYDNEWGF
SNRMLDTAVAFANAK

Specific function: Could Play A Role In Pyridoxal 5'-Phosphate Synthesis. [C]

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7669492, Length=329, Percent_Identity=49.2401215805471, Blast_Score=301, Evalue=5e-82,
Organism=Homo sapiens, GI7657116, Length=330, Percent_Identity=41.5151515151515, Blast_Score=240, Evalue=1e-63,
Organism=Escherichia coli, GI1789295, Length=334, Percent_Identity=52.3952095808383, Blast_Score=379, Evalue=1e-106,
Organism=Escherichia coli, GI1788079, Length=329, Percent_Identity=51.6717325227964, Blast_Score=313, Evalue=9e-87,
Organism=Caenorhabditis elegans, GI17534679, Length=333, Percent_Identity=49.8498498498498, Blast_Score=295, Evalue=2e-80,
Organism=Caenorhabditis elegans, GI17534677, Length=333, Percent_Identity=49.5495495495495, Blast_Score=295, Evalue=3e-80,
Organism=Caenorhabditis elegans, GI32566163, Length=335, Percent_Identity=49.5522388059701, Blast_Score=287, Evalue=6e-78,
Organism=Caenorhabditis elegans, GI17568413, Length=335, Percent_Identity=49.5522388059701, Blast_Score=287, Evalue=7e-78,
Organism=Saccharomyces cerevisiae, GI6322468, Length=328, Percent_Identity=45.4268292682927, Blast_Score=292, Evalue=5e-80,
Organism=Saccharomyces cerevisiae, GI6321631, Length=336, Percent_Identity=45.2380952380952, Blast_Score=289, Evalue=4e-79,
Organism=Saccharomyces cerevisiae, GI6322409, Length=328, Percent_Identity=45.4268292682927, Blast_Score=288, Evalue=6e-79,
Organism=Drosophila melanogaster, GI85725000, Length=328, Percent_Identity=48.780487804878, Blast_Score=289, Evalue=2e-78,
Organism=Drosophila melanogaster, GI22023983, Length=328, Percent_Identity=48.780487804878, Blast_Score=289, Evalue=2e-78,
Organism=Drosophila melanogaster, GI17933600, Length=328, Percent_Identity=48.1707317073171, Blast_Score=288, Evalue=5e-78,
Organism=Drosophila melanogaster, GI18110149, Length=328, Percent_Identity=48.1707317073171, Blast_Score=288, Evalue=5e-78,
Organism=Drosophila melanogaster, GI19922412, Length=327, Percent_Identity=46.177370030581, Blast_Score=271, Evalue=6e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006424
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.12 [H]

Molecular weight: Translated: 36366; Mature: 36234

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDAKTNAHLTQYDTAHGKFPGE
CEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCE
VSVDGDYLIVNGDRIRVLANRNPAELPWGELGVDVVFECTGFFTTKEKASAHLKGGAKKV
EEECCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEECCCEEECHHHHHHCCCCCEEE
IISAPGGKDVDATIVYGVNHQVLKAEHTVISNASCTTNCLAPLVKPLHDKIGLETGLMTT
EEECCCCCCCCEEEEEECCCEEEEECEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
VHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCEEEEEEEE
NVSIVDLSFIAKRDTTVEEVNAIMKEASEGSLKGILAYNDQPLVSIDFNHNPASSSFDST
EEEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHH
LTKVSGRLVKVSSWYDNEWGFSNRMLDTAVAFANAK
HHHHCCEEEEEEECCCCCCCCCCHHHHHHHEECCCC
>Mature Secondary Structure 
TIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDAKTNAHLTQYDTAHGKFPGE
EEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCE
VSVDGDYLIVNGDRIRVLANRNPAELPWGELGVDVVFECTGFFTTKEKASAHLKGGAKKV
EEECCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEECCCEEECHHHHHHCCCCCEEE
IISAPGGKDVDATIVYGVNHQVLKAEHTVISNASCTTNCLAPLVKPLHDKIGLETGLMTT
EEECCCCCCCCEEEEEECCCEEEEECEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
VHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRVPTI
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCEEEEEEEE
NVSIVDLSFIAKRDTTVEEVNAIMKEASEGSLKGILAYNDQPLVSIDFNHNPASSSFDST
EEEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHH
LTKVSGRLVKVSSWYDNEWGFSNRMLDTAVAFANAK
HHHHCCEEEEEEECCCCCCCCCCHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763137 [H]