| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is tkt1 [H]
Identifier: 238026204
GI number: 238026204
Start: 563173
End: 565194
Strand: Direct
Name: tkt1 [H]
Synonym: bglu_1g05350
Alternate gene names: 238026204
Gene position: 563173-565194 (Clockwise)
Preceding gene: 238026200
Following gene: 238026205
Centisome position: 14.42
GC content: 67.85
Gene sequence:
>2022_bases ATGACGACCTCGTCTACCGCCAGCACCTCCCTGATGGCCAATGCGATTCGCGCCCTCGCGATGGATGCCGTCCAGCAAGC CAACTCCGGCCACCCTGGCATGCCGATGGGCATGGCCGAGATCGGCGTGGCCCTGTGGTCGCGCCATCTGAAGCACAACC CGGCGAACCCGCACTGGGCCGATCGCGACCGCTTCGTGCTGTCGAACGGCCATGGCTCGATGCTGCTGTACTCGCTGCTG CACCTGACCGGCTATGACCTGCCGATCGAGGAGCTGAAGAACTTCCGCCAGTTGCACTCGAAGACGCCGGGCCACCCGGA ATACGGCATCACGGCCGGCGTCGAGACCACCACCGGCCCGCTCGGCCAGGGTCTCGCGAATGCGGTCGGCATGGCGCTCG CCGAGGCGCTGCTCGCCGCCGAGTTCAACAAGGACGGCGCGACGATCGTCGATCACCACACCTACGTGTTCCTCGGCGAC GGCTGCCTGATGGAAGGCATCTCGCACGAGGCGTGCTCGTTCGCCGGCACGCTGAAGCTGAACAAGCTGATCGCGCTCTA CGACGACAACGGCATCTCGATCGACGGCGACGTGGTCAACTGGTTCCACGACGACACCCCGAAGCGTTTCGAAGCCTACG GCTGGAACGTGATTCCGGGCGTGGACGGCCATGACGTCGACGCCGTCGACGCGGCGATCGCGAAGGCGAAGCTGTCGGAC AAGCCGACGCTGATCTGCTGCAAGACCGTGATCGGCAAGGGCGCGGCGACCAAGGCCGGCGGCCACGACGTGCACGGCGC GGCGCTCGGCGCCGAGGAGATCGCCAAGACGCGCGCGGCGCTCGGCTGGAACTGGGAGCCGTTCGTGATCCCGCAGGAAG TCTATGCGGCGTGGGACGGCAAGGCGGCCGGCGCGAAGCGCGAAAGCGACTGGAACGCCGTGTTCGAGGCCTACCGCGCG AAGTTCCCGGCCGAGGCCGACGAGTTCGTGCGCCGCATGGCGGGCAAGCTGCCGGCCGACTGGGCGCAGAAGGCCGCCGC GATCGTGGCCGGCGCGAACGAGCGCGGCGAGACGGTGGCCACGCGCAAGGCTTCGCAGCAGACCATCGAGGGCCTCGCCG CCGCGCTGCCCGAGCTGATCGGCGGCTCGGCCGACCTGACCGGCTCGAACCTGACGAACTGGAAGGCGTCGAAGCCGGTT CGCGCGGGCGAGAAAGGCATTCAGTGGGGAAACCATATCAATTACGGCGTGCGCGAATTCGGCATGAGCGCCGCGATCAA CGGTATCGTGCTTCATGGCGGCTACAAGCCTTTCGGCGGCACCTTCCTGACGTTCTCGGACTACAGCCGCAACGCGTTGC GCGTGGCCGCGCTGATGAAGGCGCCCTCGCTGTTCGTGTTTACGCACGACTCGATCGGCCTCGGCGAGGACGGTCCGACG CACCAGTCCATCGAGCACGTTTCGAGCCTGCGGCTGATTCCGCACCTCGATGTCTGGCGCCCGGCCGACACGGTCGAGAC GGCCGTGGCCTGGACCGAGGCCGTTGCCGCGCAACGTCCGTCGTGCCTGATCTTCAGCCGCCAGAACCTGGCGTTCAACG CGCGCAGCGACGCGCAGCTGGCGAACGTCGCCAAGGGCGGCTACGTGCTGCGCGACTGGGACGAGGAAGTCGTCGCCCGC AAGATCATCCTGATCGCGACGGGCTCCGAGGTCGAGCTGGCGATGAAGGCCGTCGAGCCGCTCGCGCAGCAGGGCATCGC CGCGCGCGTCGTGTCGATGCCGGCCACCACCGTGTTCGATCGTCAGGACGCCGAGTACCGTGAGCGCGTGCTGCCGGCCG GCGTGCGCCGCGTCGCCATCGAGGCGGGCGTGACCGACTTCTGGCGCAAGTACGTCGGCCTCGAGGGCGGCGTGATCGGG ATCGATTCGTTCGGCGAATCGGCTCCGGCCGGCGTACTCTTCAAGTATTTCGGCTTCACCATCGAGAACGTGGTCGAGAC GGCGAAGCGCGTGCTCGCCTGA
Upstream 100 bases:
>100_bases TCGCGTCCCCATGGCGCCGCATCGCGCGCCGGGAGCGGTCGGCCCGCGAGCTTCCGGACCAGCCGTGCCCCGTTTTCTCG ACTCGTTCTCCGGACTCGAC
Downstream 100 bases:
>100_bases GCGTGAGCCAGCGCGCCGGCTGCGCCTCGCCGGCGGGCCGGCGCCGTCGTGAAGCCGGCGATCCGTTTTTTTTCAGCCAT CAGGAGATTAATCATGACGA
Product: transketolase
Products: NA
Alternate protein names: TK 1 [H]
Number of amino acids: Translated: 673; Mature: 672
Protein sequence:
>673_residues MTTSSTASTSLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPANPHWADRDRFVLSNGHGSMLLYSLL HLTGYDLPIEELKNFRQLHSKTPGHPEYGITAGVETTTGPLGQGLANAVGMALAEALLAAEFNKDGATIVDHHTYVFLGD GCLMEGISHEACSFAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPGVDGHDVDAVDAAIAKAKLSD KPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTRAALGWNWEPFVIPQEVYAAWDGKAAGAKRESDWNAVFEAYRA KFPAEADEFVRRMAGKLPADWAQKAAAIVAGANERGETVATRKASQQTIEGLAAALPELIGGSADLTGSNLTNWKASKPV RAGEKGIQWGNHINYGVREFGMSAAINGIVLHGGYKPFGGTFLTFSDYSRNALRVAALMKAPSLFVFTHDSIGLGEDGPT HQSIEHVSSLRLIPHLDVWRPADTVETAVAWTEAVAAQRPSCLIFSRQNLAFNARSDAQLANVAKGGYVLRDWDEEVVAR KIILIATGSEVELAMKAVEPLAQQGIAARVVSMPATTVFDRQDAEYRERVLPAGVRRVAIEAGVTDFWRKYVGLEGGVIG IDSFGESAPAGVLFKYFGFTIENVVETAKRVLA
Sequences:
>Translated_673_residues MTTSSTASTSLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPANPHWADRDRFVLSNGHGSMLLYSLL HLTGYDLPIEELKNFRQLHSKTPGHPEYGITAGVETTTGPLGQGLANAVGMALAEALLAAEFNKDGATIVDHHTYVFLGD GCLMEGISHEACSFAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPGVDGHDVDAVDAAIAKAKLSD KPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTRAALGWNWEPFVIPQEVYAAWDGKAAGAKRESDWNAVFEAYRA KFPAEADEFVRRMAGKLPADWAQKAAAIVAGANERGETVATRKASQQTIEGLAAALPELIGGSADLTGSNLTNWKASKPV RAGEKGIQWGNHINYGVREFGMSAAINGIVLHGGYKPFGGTFLTFSDYSRNALRVAALMKAPSLFVFTHDSIGLGEDGPT HQSIEHVSSLRLIPHLDVWRPADTVETAVAWTEAVAAQRPSCLIFSRQNLAFNARSDAQLANVAKGGYVLRDWDEEVVAR KIILIATGSEVELAMKAVEPLAQQGIAARVVSMPATTVFDRQDAEYRERVLPAGVRRVAIEAGVTDFWRKYVGLEGGVIG IDSFGESAPAGVLFKYFGFTIENVVETAKRVLA >Mature_672_residues TTSSTASTSLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPANPHWADRDRFVLSNGHGSMLLYSLLH LTGYDLPIEELKNFRQLHSKTPGHPEYGITAGVETTTGPLGQGLANAVGMALAEALLAAEFNKDGATIVDHHTYVFLGDG CLMEGISHEACSFAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPGVDGHDVDAVDAAIAKAKLSDK PTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTRAALGWNWEPFVIPQEVYAAWDGKAAGAKRESDWNAVFEAYRAK FPAEADEFVRRMAGKLPADWAQKAAAIVAGANERGETVATRKASQQTIEGLAAALPELIGGSADLTGSNLTNWKASKPVR AGEKGIQWGNHINYGVREFGMSAAINGIVLHGGYKPFGGTFLTFSDYSRNALRVAALMKAPSLFVFTHDSIGLGEDGPTH QSIEHVSSLRLIPHLDVWRPADTVETAVAWTEAVAAQRPSCLIFSRQNLAFNARSDAQLANVAKGGYVLRDWDEEVVARK IILIATGSEVELAMKAVEPLAQQGIAARVVSMPATTVFDRQDAEYRERVLPAGVRRVAIEAGVTDFWRKYVGLEGGVIGI DSFGESAPAGVLFKYFGFTIENVVETAKRVLA
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=598, Percent_Identity=29.2642140468227, Blast_Score=176, Evalue=9e-44, Organism=Homo sapiens, GI4507521, Length=598, Percent_Identity=29.2642140468227, Blast_Score=176, Evalue=9e-44, Organism=Homo sapiens, GI133778974, Length=587, Percent_Identity=27.0868824531516, Blast_Score=141, Evalue=2e-33, Organism=Escherichia coli, GI48994911, Length=669, Percent_Identity=62.0328849028401, Blast_Score=855, Evalue=0.0, Organism=Escherichia coli, GI1788808, Length=664, Percent_Identity=59.9397590361446, Blast_Score=808, Evalue=0.0, Organism=Caenorhabditis elegans, GI17539652, Length=688, Percent_Identity=26.453488372093, Blast_Score=160, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6325331, Length=681, Percent_Identity=49.9265785609398, Blast_Score=617, Evalue=1e-177, Organism=Saccharomyces cerevisiae, GI6319593, Length=674, Percent_Identity=46.2908011869436, Blast_Score=564, Evalue=1e-161, Organism=Drosophila melanogaster, GI45551847, Length=684, Percent_Identity=26.7543859649123, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI45550715, Length=684, Percent_Identity=26.7543859649123, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI24666278, Length=587, Percent_Identity=27.427597955707, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI24645119, Length=651, Percent_Identity=26.42089093702, Blast_Score=149, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 72150; Mature: 72019
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00801 TRANSKETOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSTASTSLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPANPHWA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC DRDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITAGVETTTGP CCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCC LGQGLANAVGMALAEALLAAEFNKDGATIVDHHTYVFLGDGCLMEGISHEACSFAGTLKL HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCHHHHCCCHHHHHHHHHEEE NKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPGVDGHDVDAVDAAIAKAKLSD EEEEEEECCCCCEECCCEEECCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHCCC KPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTRAALGWNWEPFVIPQEVYAAWDG CCCEEEEHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEECHHHHHHHCCC KAAGAKRESDWNAVFEAYRAKFPAEADEFVRRMAGKLPADWAQKAAAIVAGANERGETVA CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCCCHH TRKASQQTIEGLAAALPELIGGSADLTGSNLTNWKASKPVRAGEKGIQWGNHINYGVREF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHH GMSAAINGIVLHGGYKPFGGTFLTFSDYSRNALRVAALMKAPSLFVFTHDSIGLGEDGPT CHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCC HQSIEHVSSLRLIPHLDVWRPADTVETAVAWTEAVAAQRPSCLIFSRQNLAFNARSDAQL HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCCHHH ANVAKGGYVLRDWDEEVVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPATTVFD HHHHCCCEEEECCCHHHHHCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCHHEEC RQDAEYRERVLPAGVRRVAIEAGVTDFWRKYVGLEGGVIGIDSFGESAPAGVLFKYFGFT CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH IENVVETAKRVLA HHHHHHHHHHHCC >Mature Secondary Structure TTSSTASTSLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPANPHWA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC DRDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITAGVETTTGP CCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCC LGQGLANAVGMALAEALLAAEFNKDGATIVDHHTYVFLGDGCLMEGISHEACSFAGTLKL HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCHHHHCCCHHHHHHHHHEEE NKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPGVDGHDVDAVDAAIAKAKLSD EEEEEEECCCCCEECCCEEECCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHCCC KPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTRAALGWNWEPFVIPQEVYAAWDG CCCEEEEHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEECHHHHHHHCCC KAAGAKRESDWNAVFEAYRAKFPAEADEFVRRMAGKLPADWAQKAAAIVAGANERGETVA CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCCCHH TRKASQQTIEGLAAALPELIGGSADLTGSNLTNWKASKPVRAGEKGIQWGNHINYGVREF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHH GMSAAINGIVLHGGYKPFGGTFLTFSDYSRNALRVAALMKAPSLFVFTHDSIGLGEDGPT CHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCC HQSIEHVSSLRLIPHLDVWRPADTVETAVAWTEAVAAQRPSCLIFSRQNLAFNARSDAQL HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCCHHH ANVAKGGYVLRDWDEEVVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPATTVFD HHHHCCCEEEECCCHHHHHCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCHHEEC RQDAEYRERVLPAGVRRVAIEAGVTDFWRKYVGLEGGVIGIDSFGESAPAGVLFKYFGFT CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH IENVVETAKRVLA HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]