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The map label for this gene is yfjD [H]

Identifier: 238026151

GI number: 238026151

Start: 508899

End: 510194

Strand: Reverse

Name: yfjD [H]

Synonym: bglu_1g04810

Alternate gene names: 238026151

Gene position: 510194-508899 (Counterclockwise)

Preceding gene: 339905956

Following gene: 238026150

Centisome position: 13.06

GC content: 65.2

Gene sequence:

>1296_bases
GTGGACCACATTCCCTTATGGGCGCAAATCTGCGCCGTCTTCGTCCTGCTTCTCTGCTCCAGCTTCTTCTCCATCTCTGA
AACGGCCATGATGGCGCTCAACCGCCATCGGCTCAAGCTGCTGGCGAGCAAGAACGCGCTAGGCGCGAAAACCACGCAGC
GCCTGCTGGCCCGCACCGACCAGTTGCTCAGCGTGATCCTGATCGGCAACAACCTGTTCAACACGATCATCCCGGTGCTG
ACCACCTCGATCGCGCTGCGCACGTTCGGCCACGACAACCTGGTGCTGTCGATCGCCACCGGGATCGTCGCGTTCCTGAT
CATCGTGTTCGCCGAGATCACGCCGAAGATCGTCGGCGCGACCTATCCCGAGCGCATCGCGCTGCCGGCCAGCCTCCTGA
TCGCGCCGCTGATGCGCGCGATGAAGCCGGTGGTATGGCTCGTCAACCAGCTCGCGAACGGCACCCTGGGCCTGCTGCGC
ATCAACACGAAGAGCGGGCGCGACCAGCGGCTCTCGCCCGAGGAACTGCGCTCGATCGTGCTCGAATCGGGCAGCTTCAT
GCCGACCAAGCACCGCAGCATCCTGCTGAACCTGTTCGATCTCGAGAACATCACCGTCGACGACGTGATGATCCCGCGCC
GCCAGATCGAGTCGCTGAACTTCGACGCGCCGCTCGACGAGATCCTGCACCAGCTCGAGACCTGCTATCACAACCGGCTG
ATCGTCTACCAGGGCGACATCGACCGCGTGCTCGGCGTGCTGCACGTGCGCAAGACGCTGACGGCGCTGCGCAACCAGGA
GTTCGACCGCGACACGCTGCGCGGGCTGCTCGCCGAGCCGTACTACGTGCCGTCCGGCACCGCCGTGTTCCAGCAGCTGC
AGTATTTCCAGGAGAGCCGCCAGCGCACCGCGCTGATCGTCAACGAATACGGTGAACTCGAAGGGCTCGTCACGCCCGAA
GACATCATCGAGGAACTGATCGGCGAATTCACGACCTCGACGCCGCGCAGCGGCGGCTCGCGCGGCGGCTGGAACGCGAA
CGGCGAGTGCATCGTCGCCGGCAGCATGCCGCTGCGCGAGCTGAACCGCTGGCTGAGCCTGAACCTGCCGACCACGGGGC
CGAAGACGCTCAACGGGCTCATCCTCGAAGTGCTCGAGGAAATCCCCGACGGCGACGTCTGCATGAAGATCGGCGACGTG
ATGCTCGAGGTCATGCGCAGCGACGACCAGGCCGTGCGCACCGTCAAGCTGTTCAAGCCGCGTGCGCCGCGCGGCGTGCT
CGGCCTGCTGCGCTGA

Upstream 100 bases:

>100_bases
GCGCCGGCCATCGGAGGTCCGACACACGGGCGGCACCGGGCACCGCGCCACCCTCTGCTATAGTCATTCCCATTGCCGAC
CCTCACCGATCCCGATCCGC

Downstream 100 bases:

>100_bases
CGCCACGGCCGGCGGCTCGCCTCGCATGCCTCGCGCGAGGCCGGCTGCGGCCACCGCCGGTGCGCGCACCGGCCGTTCGG
CCGACTGCCGGCCGCCGCGT

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDHIPLWAQICAVFVLLLCSSFFSISETAMMALNRHRLKLLASKNALGAKTTQRLLARTDQLLSVILIGNNLFNTIIPVL
TTSIALRTFGHDNLVLSIATGIVAFLIIVFAEITPKIVGATYPERIALPASLLIAPLMRAMKPVVWLVNQLANGTLGLLR
INTKSGRDQRLSPEELRSIVLESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIESLNFDAPLDEILHQLETCYHNRL
IVYQGDIDRVLGVLHVRKTLTALRNQEFDRDTLRGLLAEPYYVPSGTAVFQQLQYFQESRQRTALIVNEYGELEGLVTPE
DIIEELIGEFTTSTPRSGGSRGGWNANGECIVAGSMPLRELNRWLSLNLPTTGPKTLNGLILEVLEEIPDGDVCMKIGDV
MLEVMRSDDQAVRTVKLFKPRAPRGVLGLLR

Sequences:

>Translated_431_residues
MDHIPLWAQICAVFVLLLCSSFFSISETAMMALNRHRLKLLASKNALGAKTTQRLLARTDQLLSVILIGNNLFNTIIPVL
TTSIALRTFGHDNLVLSIATGIVAFLIIVFAEITPKIVGATYPERIALPASLLIAPLMRAMKPVVWLVNQLANGTLGLLR
INTKSGRDQRLSPEELRSIVLESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIESLNFDAPLDEILHQLETCYHNRL
IVYQGDIDRVLGVLHVRKTLTALRNQEFDRDTLRGLLAEPYYVPSGTAVFQQLQYFQESRQRTALIVNEYGELEGLVTPE
DIIEELIGEFTTSTPRSGGSRGGWNANGECIVAGSMPLRELNRWLSLNLPTTGPKTLNGLILEVLEEIPDGDVCMKIGDV
MLEVMRSDDQAVRTVKLFKPRAPRGVLGLLR
>Mature_431_residues
MDHIPLWAQICAVFVLLLCSSFFSISETAMMALNRHRLKLLASKNALGAKTTQRLLARTDQLLSVILIGNNLFNTIIPVL
TTSIALRTFGHDNLVLSIATGIVAFLIIVFAEITPKIVGATYPERIALPASLLIAPLMRAMKPVVWLVNQLANGTLGLLR
INTKSGRDQRLSPEELRSIVLESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIESLNFDAPLDEILHQLETCYHNRL
IVYQGDIDRVLGVLHVRKTLTALRNQEFDRDTLRGLLAEPYYVPSGTAVFQQLQYFQESRQRTALIVNEYGELEGLVTPE
DIIEELIGEFTTSTPRSGGSRGGWNANGECIVAGSMPLRELNRWLSLNLPTTGPKTLNGLILEVLEEIPDGDVCMKIGDV
MLEVMRSDDQAVRTVKLFKPRAPRGVLGLLR

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=341, Percent_Identity=25.8064516129032, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI40068055, Length=343, Percent_Identity=25.0728862973761, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI40068053, Length=343, Percent_Identity=25.0728862973761, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI145693175, Length=404, Percent_Identity=38.6138613861386, Blast_Score=304, Evalue=6e-84,
Organism=Escherichia coli, GI1790664, Length=429, Percent_Identity=24.009324009324, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI87082033, Length=274, Percent_Identity=28.8321167883212, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1786879, Length=255, Percent_Identity=24.3137254901961, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788119, Length=241, Percent_Identity=24.0663900414938, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48028; Mature: 48028

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHIPLWAQICAVFVLLLCSSFFSISETAMMALNRHRLKLLASKNALGAKTTQRLLARTD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QLLSVILIGNNLFNTIIPVLTTSIALRTFGHDNLVLSIATGIVAFLIIVFAEITPKIVGA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TYPERIALPASLLIAPLMRAMKPVVWLVNQLANGTLGLLRINTKSGRDQRLSPEELRSIV
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH
LESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIESLNFDAPLDEILHQLETCYHNRL
HHCCCCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCE
IVYQGDIDRVLGVLHVRKTLTALRNQEFDRDTLRGLLAEPYYVPSGTAVFQQLQYFQESR
EEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QRTALIVNEYGELEGLVTPEDIIEELIGEFTTSTPRSGGSRGGWNANGECIVAGSMPLRE
HHEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHH
LNRWLSLNLPTTGPKTLNGLILEVLEEIPDGDVCMKIGDVMLEVMRSDDQAVRTVKLFKP
HHHHEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
RAPRGVLGLLR
CCCCCHHHCCC
>Mature Secondary Structure
MDHIPLWAQICAVFVLLLCSSFFSISETAMMALNRHRLKLLASKNALGAKTTQRLLARTD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QLLSVILIGNNLFNTIIPVLTTSIALRTFGHDNLVLSIATGIVAFLIIVFAEITPKIVGA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TYPERIALPASLLIAPLMRAMKPVVWLVNQLANGTLGLLRINTKSGRDQRLSPEELRSIV
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH
LESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIESLNFDAPLDEILHQLETCYHNRL
HHCCCCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCE
IVYQGDIDRVLGVLHVRKTLTALRNQEFDRDTLRGLLAEPYYVPSGTAVFQQLQYFQESR
EEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QRTALIVNEYGELEGLVTPEDIIEELIGEFTTSTPRSGGSRGGWNANGECIVAGSMPLRE
HHEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHH
LNRWLSLNLPTTGPKTLNGLILEVLEEIPDGDVCMKIGDVMLEVMRSDDQAVRTVKLFKP
HHHHEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
RAPRGVLGLLR
CCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]