| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is zntB [H]
Identifier: 238026074
GI number: 238026074
Start: 420035
End: 421057
Strand: Direct
Name: zntB [H]
Synonym: bglu_1g04020
Alternate gene names: 238026074
Gene position: 420035-421057 (Clockwise)
Preceding gene: 238026073
Following gene: 238026077
Centisome position: 10.75
GC content: 69.4
Gene sequence:
>1023_bases ATGATCATTCCCACCTACGGCGCCGACACTTCCGGCATGATCTGCGCGTTCCGCTTCGCGCCGGACGCGGCCGGCGTGCC GGTCGACGCGGCCGGGACCGGCGCGCTGCTGCGGCCCGAGGCGGCCGGCGACAGCAATGCGCCGCGCGAATTCCACTGGT TGCACTTCAATCTCGCGCACGGCGCGAGCGAGCGCTGGATGCGCGCCAATCTCGGCCTGCCCGAGACGTTCTACGAATTC CTGCGCGAGGGCTCGCACTCGACGCGCATCGAGCAGCAGGACGGGGTGCTGCGCGCCGTCGTCAACGACGTGATGTTCAG CCTCGACATGGAGGCGGCCGAGGTCTCGACGCTGTGGGTCTACGTCGACCGGCGCATGATGGTGACCGCGCGCCTGAAGC CGCTGCGCTCGGTCGATACGCTGCGCGAGAGCGTGCGGCAGGGCGAGCGGTTCCGCTCGCCCACCGAGCTGCTGATCCAC CTGCTGCGCGATCAGGCCGACGTGATGCAGCACATCGTGCGGCGCGCGAGCGTGGACGTCGATCGCATCGAGGACCGCTT CCTGTCGCAGCGGCCCACCGCGAACCGCGACCAGCTCGGCTCGATGCGCCGGACCATGACGCGCCTGCAGCGCATGCTCG CGCCCGAGCCCGGCTCGATCTTCCGGCTGCTGGCCAAGCCGCCCGCGTGGCTGCTCGGCGCCGACGTGCAGGAGCTGCGC GAATCGACCGAGGAGTTCTCGCTGGTGCTGGCCGACCTGGCCGGCCTCGTCGAGCGGATCAAGCTGCTGCAGGAAGAGAT CACCTCGCGCCTCGACGAACAGAACAACCGCACGCTGTTCACGCTGACGCTGGTGACCGTGATCGCGCTGCCGATCAACA TCATCGCCGGCTTCTTCGGCATGAACGTGGGCGGCGTGCCGCTCGCCGAGAACAAGCATGGCTTCTGGCTGATGGTGCTG TTCGTCGCGCTGTTCACGGCGCTCGCCGCCTGGTGGGCGTTCCGGCGGCGAGGGGACCGCTAG
Upstream 100 bases:
>100_bases GTGACACGCGGATCGGCGACATATCGGGGGGCGCCGCGCGCGGCATGGCAAGGCGGCAGGGGCAGGGCCAGGATTCGCAG GACAGCCGATGAAACCAGAG
Downstream 100 bases:
>100_bases CGCCAGGCGCGGCGGCACGGGTGCGGGCCGCCGGCAGCGCGGCCCCGCGCGTCAGGCCCGCGTGCCGCGCGATCAGCGCA GCCAGCGGACCGCCGCCTCG
Product: Mg2+/Co2+ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MIIPTYGADTSGMICAFRFAPDAAGVPVDAAGTGALLRPEAAGDSNAPREFHWLHFNLAHGASERWMRANLGLPETFYEF LREGSHSTRIEQQDGVLRAVVNDVMFSLDMEAAEVSTLWVYVDRRMMVTARLKPLRSVDTLRESVRQGERFRSPTELLIH LLRDQADVMQHIVRRASVDVDRIEDRFLSQRPTANRDQLGSMRRTMTRLQRMLAPEPGSIFRLLAKPPAWLLGADVQELR ESTEEFSLVLADLAGLVERIKLLQEEITSRLDEQNNRTLFTLTLVTVIALPINIIAGFFGMNVGGVPLAENKHGFWLMVL FVALFTALAAWWAFRRRGDR
Sequences:
>Translated_340_residues MIIPTYGADTSGMICAFRFAPDAAGVPVDAAGTGALLRPEAAGDSNAPREFHWLHFNLAHGASERWMRANLGLPETFYEF LREGSHSTRIEQQDGVLRAVVNDVMFSLDMEAAEVSTLWVYVDRRMMVTARLKPLRSVDTLRESVRQGERFRSPTELLIH LLRDQADVMQHIVRRASVDVDRIEDRFLSQRPTANRDQLGSMRRTMTRLQRMLAPEPGSIFRLLAKPPAWLLGADVQELR ESTEEFSLVLADLAGLVERIKLLQEEITSRLDEQNNRTLFTLTLVTVIALPINIIAGFFGMNVGGVPLAENKHGFWLMVL FVALFTALAAWWAFRRRGDR >Mature_340_residues MIIPTYGADTSGMICAFRFAPDAAGVPVDAAGTGALLRPEAAGDSNAPREFHWLHFNLAHGASERWMRANLGLPETFYEF LREGSHSTRIEQQDGVLRAVVNDVMFSLDMEAAEVSTLWVYVDRRMMVTARLKPLRSVDTLRESVRQGERFRSPTELLIH LLRDQADVMQHIVRRASVDVDRIEDRFLSQRPTANRDQLGSMRRTMTRLQRMLAPEPGSIFRLLAKPPAWLLGADVQELR ESTEEFSLVLADLAGLVERIKLLQEEITSRLDEQNNRTLFTLTLVTVIALPINIIAGFFGMNVGGVPLAENKHGFWLMVL FVALFTALAAWWAFRRRGDR
Specific function: Mediates efflux of zinc ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=285, Percent_Identity=20.7017543859649, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 38431; Mature: 38431
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPTYGADTSGMICAFRFAPDAAGVPVDAAGTGALLRPEAAGDSNAPREFHWLHFNLAH CEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCC GASERWMRANLGLPETFYEFLREGSHSTRIEQQDGVLRAVVNDVMFSLDMEAAEVSTLWV CCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEE YVDRRMMVTARLKPLRSVDTLRESVRQGERFRSPTELLIHLLRDQADVMQHIVRRASVDV EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH DRIEDRFLSQRPTANRDQLGSMRRTMTRLQRMLAPEPGSIFRLLAKPPAWLLGADVQELR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCCCHHHHH ESTEEFSLVLADLAGLVERIKLLQEEITSRLDEQNNRTLFTLTLVTVIALPINIIAGFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH MNVGGVPLAENKHGFWLMVLFVALFTALAAWWAFRRRGDR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIIPTYGADTSGMICAFRFAPDAAGVPVDAAGTGALLRPEAAGDSNAPREFHWLHFNLAH CEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCC GASERWMRANLGLPETFYEFLREGSHSTRIEQQDGVLRAVVNDVMFSLDMEAAEVSTLWV CCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEE YVDRRMMVTARLKPLRSVDTLRESVRQGERFRSPTELLIHLLRDQADVMQHIVRRASVDV EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH DRIEDRFLSQRPTANRDQLGSMRRTMTRLQRMLAPEPGSIFRLLAKPPAWLLGADVQELR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCCCHHHHH ESTEEFSLVLADLAGLVERIKLLQEEITSRLDEQNNRTLFTLTLVTVIALPINIIAGFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH MNVGGVPLAENKHGFWLMVLFVALFTALAAWWAFRRRGDR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA