Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238026073

Identifier: 238026073

GI number: 238026073

Start: 418678

End: 419637

Strand: Direct

Name: 238026073

Synonym: bglu_1g04010

Alternate gene names: NA

Gene position: 418678-419637 (Clockwise)

Preceding gene: 238026068

Following gene: 238026074

Centisome position: 10.72

GC content: 73.02

Gene sequence:

>960_bases
ATGAGTGCGCCGGAAGATTCAAATCGGAAAGCTCCACCCAGTCTGCTTTCTAACCCGGGCCAGAAGGGCGGGCAGAACGC
ATCGCGTATTCTCGCCAATCTCGAAGGGCGCGTGTCGCCGCAACAGAGCGCCGAGAGCGCCAAGCCGTCGCGTTCCCGCA
AGGGGCCGCTCGCGGTGATCGCGCTTGCGGTCGTGGCCCTGGCCGGTTGGGGCGCATGGCGCATCCAGGCCCAGCAGGGC
GCGGCGCCCGCCGTCACCGCGGCGGTCCCCGCCTCGGCCGCGTCCGCGCCGGCCGCCGTCGCAGCCGCGTCCGGCGCCGC
TGCGGCGGCAAGCGGTACGCAGCTCGCGCAGGCCGCATCCACGCCGCAGACGGCGACCATCGTCAACGAGGAACCGGCCA
GGGCCGATGCCGATGCGGACGCCTCGGGCGCGCGTGGCGCATCCGGCAGCCGGCTGTCTCAGGCGCTGGCCAACGGCGCG
ACCGATTCGAATGCCGCCGGCGGCGCGGCCCTCGCGGCCGCCGCGTCGAAGCACGAGGCCGCCGGCGAGAAACCGAAGAC
GAAGGCCGAGAAGCTGGCCGACGCGAAGCGCGAGAAGCAGGAAAAGCAGCAGGAGCGGCAGGAACTGGCCGCCAAGAAGC
GTCACGACCGCCAGCTGGAGGCCGCCGCGAAGCGCCACCCCGCCACCGCGAGCCAGCATCGCGACGACCCCGACGCCGAT
CTGCTCGCCGCGCTGGTGGCCCGCACCAAGCCTGCCGATCCCGGCCCGCCGCCCTCGGCCAAGCCGAAGAAGGCCGTCGC
GAAGGTCGCCGCGAACGAGGCCACGCTTGCCGCGCGCGTGAAGGAATGCGGCACGCGCGGCTTTTTCGAGGACCAGCTGT
GCCGCTGGCGCGTGTGCGACGGCCACTGGGGCAAGGACCCGGCCTGCCCGAACTCGGCGAACCAGAACCGCCAGCCCTGA

Upstream 100 bases:

>100_bases
GATTGTCTTTTAGAAGTCTTGCTCTTAGAATCAGGCCTGCTTCGAGTCGGCCGGGCGATATTATTGCTGCGAATTAAACC
AGGATTCAACGAGACATTGA

Downstream 100 bases:

>100_bases
CCGTCCCGGCCCCGACGGCCGGCAACCGGCCGGCCGCGGTGCCGCGCGTGCCTGACGCGGCGCCCCGTTGCGTCGCGCGG
GTGCGCCCTCGAGTGACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSAPEDSNRKAPPSLLSNPGQKGGQNASRILANLEGRVSPQQSAESAKPSRSRKGPLAVIALAVVALAGWGAWRIQAQQG
AAPAVTAAVPASAASAPAAVAAASGAAAAASGTQLAQAASTPQTATIVNEEPARADADADASGARGASGSRLSQALANGA
TDSNAAGGAALAAAASKHEAAGEKPKTKAEKLADAKREKQEKQQERQELAAKKRHDRQLEAAAKRHPATASQHRDDPDAD
LLAALVARTKPADPGPPPSAKPKKAVAKVAANEATLAARVKECGTRGFFEDQLCRWRVCDGHWGKDPACPNSANQNRQP

Sequences:

>Translated_319_residues
MSAPEDSNRKAPPSLLSNPGQKGGQNASRILANLEGRVSPQQSAESAKPSRSRKGPLAVIALAVVALAGWGAWRIQAQQG
AAPAVTAAVPASAASAPAAVAAASGAAAAASGTQLAQAASTPQTATIVNEEPARADADADASGARGASGSRLSQALANGA
TDSNAAGGAALAAAASKHEAAGEKPKTKAEKLADAKREKQEKQQERQELAAKKRHDRQLEAAAKRHPATASQHRDDPDAD
LLAALVARTKPADPGPPPSAKPKKAVAKVAANEATLAARVKECGTRGFFEDQLCRWRVCDGHWGKDPACPNSANQNRQP
>Mature_318_residues
SAPEDSNRKAPPSLLSNPGQKGGQNASRILANLEGRVSPQQSAESAKPSRSRKGPLAVIALAVVALAGWGAWRIQAQQGA
APAVTAAVPASAASAPAAVAAASGAAAAASGTQLAQAASTPQTATIVNEEPARADADADASGARGASGSRLSQALANGAT
DSNAAGGAALAAAASKHEAAGEKPKTKAEKLADAKREKQEKQQERQELAAKKRHDRQLEAAAKRHPATASQHRDDPDADL
LAALVARTKPADPGPPPSAKPKKAVAKVAANEATLAARVKECGTRGFFEDQLCRWRVCDGHWGKDPACPNSANQNRQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32433; Mature: 32302

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPEDSNRKAPPSLLSNPGQKGGQNASRILANLEGRVSPQQSAESAKPSRSRKGPLAVI
CCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHH
ALAVVALAGWGAWRIQAQQGAAPAVTAAVPASAASAPAAVAAASGAAAAASGTQLAQAAS
HHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHCCCHHHHCCHHHHHHHC
TPQTATIVNEEPARADADADASGARGASGSRLSQALANGATDSNAAGGAALAAAASKHEA
CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AGEKPKTKAEKLADAKREKQEKQQERQELAAKKRHDRQLEAAAKRHPATASQHRDDPDAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHH
LLAALVARTKPADPGPPPSAKPKKAVAKVAANEATLAARVKECGTRGFFEDQLCRWRVCD
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECC
GHWGKDPACPNSANQNRQP
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAPEDSNRKAPPSLLSNPGQKGGQNASRILANLEGRVSPQQSAESAKPSRSRKGPLAVI
CCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHH
ALAVVALAGWGAWRIQAQQGAAPAVTAAVPASAASAPAAVAAASGAAAAASGTQLAQAAS
HHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHCCCHHHHCCHHHHHHHC
TPQTATIVNEEPARADADADASGARGASGSRLSQALANGATDSNAAGGAALAAAASKHEA
CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AGEKPKTKAEKLADAKREKQEKQQERQELAAKKRHDRQLEAAAKRHPATASQHRDDPDAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHH
LLAALVARTKPADPGPPPSAKPKKAVAKVAANEATLAARVKECGTRGFFEDQLCRWRVCD
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECC
GHWGKDPACPNSANQNRQP
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA